[Insight-users] Reading a Tiff image series

[Camilo Melani]

*Hi, I'm trying  to read a series of TIFF images captured with a 
confocal microscope, but ITK give me this error message.
Error Message:
*
------------------------------------------------------------------
TIFFReadDirectory: Warning, 
e:/Documentos/Universidad/Data/ch0/t01_001.tif: unknown field with tag 
33923 (0x8483) encountered.
------------------------------------------------------------------

*I send also a link to the images I'm trying to read.
http://us.f13.yahoofs.com/bc/4415f191ma8e3b5a7/bc/Imagenes/images.zip?bf8ybWEBPx7Z_y9k 
*

------------------------------------------------------------------
Print of the reader:
NumericSeriesFileNames (01729180)
 RTTI typeinfo:   class itk::NumericSeriesFileNames
 Reference Count: 2
 Modified Time: 13
 Debug: Off
 Observers:
   none
 StartIndex: 0
 EndIndex: 1
 IncrementIndex: 1
 SeriesFormat: e:/Documentos/Universidad/Data/ch0/t01_%03d.tif
 Filenames[0]: e:/Documentos/Universidad/Data/ch0/t01_000.tif
 Filenames[1]: e:/Documentos/Universidad/Data/ch0/t01_001.tif
------------------------------------------------------------------

*
The code I use to read the volumen is: *

------------------------------------------------------------------
const    unsigned char    Dimension = 3;
typedef unsigned char    PixelType;
typedef itk::Image< PixelType, Dimension >  ImageType;

ImageType::Pointer LoadImage( const char * fileNameFormat, int first, 
int last )
{
 typedef itk::ImageSeriesReader< ImageType > ReaderType;
 ReaderType::Pointer reader;
 ImageType::Pointer image;

 reader = ReaderType::New();

 reader->SetImageIO(itk::TIFFImageIO::New());
 reader->SetFileName(fileNameFormat);


 typedef itk::NumericSeriesFileNames NameGeneratorType;
 NameGeneratorType::Pointer nameGenerator = NameGeneratorType::New();

 nameGenerator->SetSeriesFormat( fileNameFormat );
 nameGenerator->SetStartIndex( first );
 nameGenerator->SetEndIndex( last );
 nameGenerator->SetIncrementIndex( 1 );

 reader->SetFileNames( nameGenerator->GetFileNames() );  
 std::cout << nameGenerator << std::endl;

 try
   {
       reader->Update();        }
   catch( itk::ExceptionObject &e )
   {
       std::cout<<e<<std::endl;
   }

   image = reader->GetOutput();

   return image;
}
------------------------------------------------------------------

*And if I use the itkLSMImageIO object and the file has .lsm extension I 
get the folowing message: *

------------------------------------------------------------------
TIFFFieldWithTag: Internal error, unknown tag 0x866c.
Assertion failed: fip != NULL, file 
E:\lenguajes\Insight\Utilities\tiff\tif_dirinfo.c, line 468

abnormal program termination
------------------------------------------------------------------

*if the file has .tif extension the error is:
*
------------------------------------------------------------------
itk::ExceptionObject (0117FBE0)
Location: "unknown"
File: E:\lenguajes\Insight\Code\IO\itkTIFFImageIO.cxx
Line: 1092
Description: itk::ERROR: LSMImageIO(017290B0): Cannot open the file!
------------------------------------------------------------------

*Does anyone know how to read this image format or if I'm missing 
something?

Thanks.
Camilo.
*
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