[Insight-users] Poor Tree Trace Interface

Kevin H. Hobbs hobbsk at ohiou.edu
Fri Apr 18 08:56:20 EDT 2008


I've been working on an program for tracing out the center-lines of
dendrites in confocal images.

I have a working first version at :
http://crab-lab.zool.ohiou.edu/kevin/Interactive_Trace-0.0.1/

This is a *very* early version it segfaults, it throws exceptions, it's
written in a very C like way, it's clunky... but it works.

One of the core requirements was that the original image could be huge,
and that work could be done on small pieces.

It uses vesselness -> fast marching -> gradient -> stream tracing to
produce the center-lines.

Please give me your comments.
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