[Insight-users] Poor Tree Trace Interface

Kevin H. Hobbs hobbsk at ohiou.edu
Mon Apr 28 16:31:08 EDT 2008


I've made my program much easier to use, mostly by incorporating most of
the logic into a class and using the UserEvent callback in the VTK
interactor.

http://crab-lab.zool.ohiou.edu/kevin/Interactive_Trace-0.0.4/

There are still some problems:
	1) there's some issue with extents after clips.
	2) it still segfaults
	3) the stitching of the branch pieces is off
	4) it should use buttons instead of the silly text menu

On Fri, 2008-04-18 at 08:56 -0400, Kevin H. Hobbs wrote:
> I've been working on an program for tracing out the center-lines of
> dendrites in confocal images.
> 
> I have a working first version at :
> http://crab-lab.zool.ohiou.edu/kevin/Interactive_Trace-0.0.1/
> 
> This is a *very* early version it segfaults, it throws exceptions, it's
> written in a very C like way, it's clunky... but it works.
> 
> One of the core requirements was that the original image could be huge,
> and that work could be done on small pieces.
> 
> It uses vesselness -> fast marching -> gradient -> stream tracing to
> produce the center-lines.
> 
> Please give me your comments.
> _______________________________________________
> Insight-users mailing list
> Insight-users at itk.org
> http://www.itk.org/mailman/listinfo/insight-users
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