[Insight-users] Dashboard Submit Hangs

Kevin H. Hobbs hobbsk at ohiou.edu
Wed Aug 20 06:36:17 EDT 2008


On Tuesday 19 August 2008 04:44:39 pm Sean McBride wrote:
>gdb shows it stuck here:
>
> It has the following file descriptor open:
>

Yesterday I killed my nightly script that runs all of the builds, all of the 
ctests, and reran the nightly script. All of the builds went OK (Tests failed 
but nothing hung up.)

Last night cron reran the script and ctest hung at submitting the ITK 
DashBoard again.

This morning I ran lsof  and searched for ctest to get 
gargon_ctest_open_files.txt, and gdb attached to the running ctest to get 
gargon_stuck_ctest_gdb_bt.txt.

I hope something there means something to somebody...

I plan on switching all of the builds today to use the system CMake instead of 
CVS and see if the problem goes away.
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ctest     11141     kevin  cwd       DIR                9,3     4096   41058388 /home/kevin/kitware
ctest     11141     kevin  rtd       DIR                9,2     4096          2 /
ctest     11141     kevin  txt       REG                9,3 36980631   41452145 /home/kevin/kitware/CMake_Build/bin/ctest
ctest     11141     kevin  mem       REG                9,2    11824    6730608 /lib64/libcom_err.so.2.1
ctest     11141     kevin  mem       REG                9,2    36216    1869427 /usr/lib64/libkrb5support.so.0.1
ctest     11141     kevin  mem       REG                9,2   191400    1871936 /usr/lib64/libgssapi_krb5.so.2.2
ctest     11141     kevin  mem       REG                9,2   153664    1871652 /usr/lib64/libk5crypto.so.3.1
ctest     11141     kevin  mem       REG                9,2   602376    1871808 /usr/lib64/libkrb5.so.3.3
ctest     11141     kevin  mem       REG                9,2   302576    6730652 /lib64/libssl.so.0.9.8b
ctest     11141     kevin  mem       REG                9,2   133616    6730743 /lib64/ld-2.7.so
ctest     11141     kevin  mem       REG                9,2  1717544    6730744 /lib64/libc-2.7.so
ctest     11141     kevin  mem       REG                9,2   611096    6730745 /lib64/libm-2.7.so
ctest     11141     kevin  mem       REG                9,2    23288    6730746 /lib64/libdl-2.7.so
ctest     11141     kevin  mem       REG                9,2    85904    6730750 /lib64/libz.so.1.2.3
ctest     11141     kevin  mem       REG                9,2    92816    6730759 /lib64/libresolv-2.7.so
ctest     11141     kevin  mem       REG                9,2    58600    6730767 /lib64/libgcc_s-4.1.2-20070925.so.1
ctest     11141     kevin  mem       REG                9,2  1330016    6730762 /lib64/libcrypto.so.0.9.8b
ctest     11141     kevin  mem       REG                9,2     9728    6730758 /lib64/libkeyutils-1.2.so
ctest     11141     kevin  mem       REG                9,2   976512    1892647 /usr/lib64/libstdc++.so.6.0.8
ctest     11141     kevin  mem       REG                9,2   108064    6730452 /lib64/libselinux.so.1
ctest     11141     kevin  mem       REG                9,2   208848    1876559 /usr/lib64/libidn.so.11.5.28
ctest     11141     kevin    0r     FIFO                0,6            54702010 pipe
ctest     11141     kevin    1w     FIFO                0,6            54702011 pipe
ctest     11141     kevin    2w     FIFO                0,6            54702011 pipe
ctest     11141     kevin    3r     FIFO                0,6            54797826 pipe
ctest     11141     kevin    4w     FIFO                0,6            54797826 pipe
ctest     11141     kevin    5r     FIFO                0,6            54797827 pipe
ctest     11141     kevin    7r     FIFO                0,6            54797828 pipe
ctest     14973     kevin  cwd       DIR                9,3     4096   41844737 /home/kevin/kitware/Insight_build
ctest     14973     kevin  rtd       DIR                9,2     4096          2 /
ctest     14973     kevin  txt       REG                9,3 36980631   41452145 /home/kevin/kitware/CMake_Build/bin/ctest
ctest     14973     kevin  mem       REG                9,2    53816    6730460 /lib64/libnss_files-2.7.so
ctest     14973     kevin  mem       REG                9,2    23496    6730458 /lib64/libnss_dns-2.7.so
ctest     14973     kevin  mem       REG                9,2    11824    6730608 /lib64/libcom_err.so.2.1
ctest     14973     kevin  mem       REG                9,2    36216    1869427 /usr/lib64/libkrb5support.so.0.1
ctest     14973     kevin  mem       REG                9,2   191400    1871936 /usr/lib64/libgssapi_krb5.so.2.2
ctest     14973     kevin  mem       REG                9,2   153664    1871652 /usr/lib64/libk5crypto.so.3.1
ctest     14973     kevin  mem       REG                9,2   602376    1871808 /usr/lib64/libkrb5.so.3.3
ctest     14973     kevin  mem       REG                9,2   302576    6730652 /lib64/libssl.so.0.9.8b
ctest     14973     kevin  mem       REG                9,2   133616    6730743 /lib64/ld-2.7.so
ctest     14973     kevin  mem       REG                9,2  1717544    6730744 /lib64/libc-2.7.so
ctest     14973     kevin  mem       REG                9,2   611096    6730745 /lib64/libm-2.7.so
ctest     14973     kevin  mem       REG                9,2    23288    6730746 /lib64/libdl-2.7.so
ctest     14973     kevin  mem       REG                9,2    85904    6730750 /lib64/libz.so.1.2.3
ctest     14973     kevin  mem       REG                9,2    92816    6730759 /lib64/libresolv-2.7.so
ctest     14973     kevin  mem       REG                9,2    58600    6730767 /lib64/libgcc_s-4.1.2-20070925.so.1
ctest     14973     kevin  mem       REG                9,2  1330016    6730762 /lib64/libcrypto.so.0.9.8b
ctest     14973     kevin  mem       REG                9,2     9728    6730758 /lib64/libkeyutils-1.2.so
ctest     14973     kevin  mem       REG                9,2   976512    1892647 /usr/lib64/libstdc++.so.6.0.8
ctest     14973     kevin  mem       REG                9,2   108064    6730452 /lib64/libselinux.so.1
ctest     14973     kevin  mem       REG                9,2   208848    1876559 /usr/lib64/libidn.so.11.5.28
ctest     14973     kevin    0r     FIFO                0,6            54702010 pipe
ctest     14973     kevin    1w     FIFO                0,6            54797828 pipe
ctest     14973     kevin    2w     FIFO                0,6            54797827 pipe
ctest     14973     kevin    3w      REG                9,3      776   52887617 /home/kevin/kitware/Insight_build/Testing/Temporary/LastSubmit_20080820-0100.log.tmp
ctest     14973     kevin    4r      REG                9,3  7420161   51118083 /home/kevin/kitware/Insight_build/Testing/20080820-0100/Test.xml
ctest     14973     kevin    5u     IPv4           54852232                 TCP gargon.hooperlab:37293->66-194-253-26.static.twtelecom.net:http (ESTABLISHED)
grep      15948     kevin    1w      REG                9,3        0   41058307 /home/kevin/kitware/ctest_open_files.txt
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#0  0x0000003ae7ccbd2f in __poll (fds=0x7fff595888d0, nfds=1, 
    timeout=1000) at ../sysdeps/unix/sysv/linux/poll.c:83
#1  0x000000000070d890 in Curl_select (readfd=5, writefd=-1, 
    timeout_ms=1000)
    at /home/kevin/kitware/CMake/Utilities/cmcurl/select.c:101
#2  0x00000000006f8d3a in Curl_perform (data=0x2a5c670)
    at /home/kevin/kitware/CMake/Utilities/cmcurl/transfer.c:1805
#3  0x00000000004d1433 in cmCTestSubmitHandler::SubmitUsingHTTP (
    this=0x21c17a0, localprefix=@0x7fff59589ac0, 
    files=<value optimized out>, remoteprefix=@0x7fff59589ab0, 
    url=@0x7fff59589aa0)
    at /home/kevin/kitware/CMake/Source/CTest/cmCTestSubmitHandler.cxx:366
#4  0x00000000004d5ef9 in cmCTestSubmitHandler::ProcessHandler (
    this=0x21c17a0)
    at /home/kevin/kitware/CMake/Source/CTest/cmCTestSubmitHandler.cxx:1006
#5  0x000000000048ad09 in cmCTest::ProcessTests (this=0x7fff5958a560)
    at /home/kevin/kitware/CMake/Source/cmCTest.cxx:918
#6  0x0000000000490855 in cmCTest::Run (this=0x7fff5958a560, 
    args=@0x7fff5958aa10, output=0x7fff5958aa30)
    at /home/kevin/kitware/CMake/Source/cmCTest.cxx:2020
#7  0x000000000047a7f8 in main (argc=5, argv=0x7fff5958aa70)
    at /home/kevin/kitware/CMake/Source/ctest.cxx:274
Current language:  auto; currently c
Missing separate debuginfos, use: debuginfo-install e2fsprogs.x86_64 keyutils.x86_64 krb5.x86_64 libidn.x86_64 libselinux.x86_64 openssl.x86_64 zlib.x86_64
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