[Insight-users] ITK and python
Gaëtan Lehmann
gaetan.lehmann at jouy.inra.fr
Tue Nov 4 10:32:12 EST 2008
Can you try with cable swig cvs and itk cvs?
We are close to a release, so there are in good shape :-)
Thanks,
Gaëtan
Le 3 nov. 08 à 10:26, Olivier Tournaire a écrit :
> Thank you Gaëtan for you reply.
>
> I tried this morning to build python wrapping for itk, but still
> without success. Here are the steps I performed :
>
> 1) mkdir build_with_python && cd build_with_python
> 2) ccmake ..
> 3) Turn USE_WRAP_ITK ON
> 4) Turn ITK_USE_REVIEW ON
> 5) make -j3
>
> The build stops at 43%, "Generating wrap_vcl_complex.xml"
> He are are the errors :
>
> In file included from /usr/include/wchar.h:831,
> from /usr/include/c++/4.3/cwchar:52,
> from /usr/include/c++/4.3/bits/postypes.h:47,
> from /usr/include/c++/4.3/iosfwd:47,
> from /usr/include/c++/4.3/ios:44,
> from /usr/include/c++/4.3/istream:45,
> from /usr/include/c++/4.3/sstream:44,
> from /usr/include/c++/4.3/complex:52,
> from /home/olivier/work/dev/lib/
> InsightToolkit-3.8.0/Utilities/vxl/vcl/iso/vcl_complex.h:6,
> from /home/olivier/work/dev/lib/
> InsightToolkit-3.8.0/Utilities/vxl/vcl/vcl_complex.h:62,
> from /home/olivier/work/dev/lib/
> InsightToolkit-3.8.0/build_with_python/Wrapping/WrapITK/Modules/
> VXLNumerics/wrap_vcl_complex.cxx:1:
> /usr/include/bits/wchar2.h: In function 'int swprintf(wchar_t*,
> size_t, const wchar_t*, ...)':
> /usr/include/bits/wchar2.h:290: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/wchar2.h:291: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/wchar2.h: In function 'int wprintf(const
> wchar_t*, ...)':
> /usr/include/bits/wchar2.h:340: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/wchar2.h: In function 'int fwprintf(__FILE*, const
> wchar_t*, ...)':
> /usr/include/bits/wchar2.h:347: error: '__builtin_va_arg_pack' was
> not declared in this scope
> In file included from /usr/include/stdio.h:906,
> from /usr/include/c++/4.3/cstdio:50,
> from /usr/include/c++/4.3/bits/char_traits.h:48,
> from /usr/include/c++/4.3/ios:46,
> from /usr/include/c++/4.3/istream:45,
> from /usr/include/c++/4.3/sstream:44,
> from /usr/include/c++/4.3/complex:52,
> from /home/olivier/work/dev/lib/
> InsightToolkit-3.8.0/Utilities/vxl/vcl/iso/vcl_complex.h:6,
> from /home/olivier/work/dev/lib/
> InsightToolkit-3.8.0/Utilities/vxl/vcl/vcl_complex.h:62,
> from /home/olivier/work/dev/lib/
> InsightToolkit-3.8.0/build_with_python/Wrapping/WrapITK/Modules/
> VXLNumerics/wrap_vcl_complex.cxx:1:
> /usr/include/bits/stdio2.h: In function 'int sprintf(char*, const
> char*, ...)':
> /usr/include/bits/stdio2.h:35: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int snprintf(char*, size_t,
> const char*, ...)':
> /usr/include/bits/stdio2.h:66: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int fprintf(FILE*, const
> char*, ...)':
> /usr/include/bits/stdio2.h:99: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int printf(const
> char*, ...)':
> /usr/include/bits/stdio2.h:105: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int asprintf(char**, const
> char*, ...)':
> /usr/include/bits/stdio2.h:159: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int __asprintf(char**,
> const char*, ...)':
> /usr/include/bits/stdio2.h:167: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int dprintf(int, const
> char*, ...)':
> /usr/include/bits/stdio2.h:174: error: '__builtin_va_arg_pack' was
> not declared in this scope
> /usr/include/bits/stdio2.h: In function 'int
> obstack_printf(obstack*, const char*, ...)':
> /usr/include/bits/stdio2.h:182: error: '__builtin_va_arg_pack' was
> not declared in this scope
> make[2]: *** [Wrapping/WrapITK/Modules/VXLNumerics/
> wrap_vcl_complex.xml] Erreur 1
> make[1]: *** [Wrapping/WrapITK/Modules/VXLNumerics/CMakeFiles/
> _VXLNumericsPython.dir/all] Erreur 2
> make: *** [all] Erreur 2
>
>
> I am running an ubuntu-8.10 with g++ 4.3.2, gccxml 0.9.0, python 2.5
> and cswig 1.3.35. Do you have any idea of the problem ?
>
> Best regards,
>
> Olivier
>
> 2008/11/3 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>
>
> Le 2 nov. 08 à 19:41, Olivier Tournaire a écrit :
>
>
> Hi all,
>
> Can someone tells me what is the status of ITK python wrapping ?
> Which compiler(s) and versio(s) of python are supported and so on ...
>
>
> Hi Olivier,
>
> You can use ITK from python in 3 ways at this time:
> * CSwig: that's the one you see directly in ITK options as ;
> * WrapITK stable: it is included in ITK, and is enabled with the
> USE_WRAPITK_OPTION ;
> * WrapITK unstable: the development version of wrapitk, available in
> a separate repository.
> I would recommend to use WrapITK stable, as it is way more complete
> than CSwig, and much tested than WrapITK unstable.
>
> All those version should work with python 2.4 and 2.5, and gcc 4.x
> and msvc 7.1, on linux, Mac OS X and solaris.
> I'm using gcc 4.3 at this time.
>
> I've been quite busy in the last week, and I didn't had enough time
> to carefully read the mailing list, so when you have a question on
> python wrapping, please put my address in the recipients (and keep
> also itk users ML, for the record). That way I shouldn't miss it.
>
> Regards,
>
> Gaëtan
>
> --
> Gaëtan Lehmann
> Biologie du Développement et de la Reproduction
> INRA de Jouy-en-Josas (France)
> tel: +33 1 34 65 29 66 fax: 01 34 65 29 09
> http://voxel.jouy.inra.fr http://www.mandriva.org
> http://www.itk.org http://www.clavier-dvorak.org
>
>
--
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66 fax: 01 34 65 29 09
http://voxel.jouy.inra.fr http://www.mandriva.org
http://www.itk.org http://www.clavier-dvorak.org
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