[Insight-users] Segmentation fault with 2.2G data but not with smaller subset

Luis Ibanez luis.ibanez at kitware.com
Sun Aug 9 18:49:17 EDT 2009


Lynx,

Mike seem to be right here.

It looks like your program is failing to allocate enough
memory at the moment of  reading the image with the
ImageFileReader.

In a 32bits system you will not be able to load images
larger than 2Gb.


      Regards,


             Luis


---------------------------------------------------------------------------
On Sun, Aug 9, 2009 at 5:19 PM, Mike Jackson <mike.jackson at bluequartz.net>wrote:

> Just to cover all the bases:
>
> You have enough Physical Memory in your Machine to load that much data?
> You have ITK compiled in 64 Bit mode
> You are running  on a 64 Bit Operating System?
>
> I'm not great at reading gdb traces so I'll leave that for others but
> thought we would get the basic questions out of the way now.
>
> ----
> Mike Jackson
>
>
> On Sun, Aug 9, 2009 at 5:14 PM, <lynx.abraxas at freenet.de> wrote:
> > Hello!
> >
> >
> >
> > My  little SignedDanielssonDistanceMapImageFilter and watershed filter
> program
> > runs fine with a subset (45M) of my acutal data but when I use the  full
>  data
> > set  (2.2G)  it  stops after a minute with a segmentation fault. What
> could be
> > the cause for that? Below is  some  gdb  output  I'm  not  able  to
>  interpret
> > further.
> >
> > Thanks for any help or hints
> > Lynx
> >
> >
> >
> >
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