[Insight-users] registration: final transform applied to RGB images

[Darren Weber]

All hail the guru!

Yea, that's the trick.

Thanks Bill!
Darren



On Wed, Sep 30, 2009 at 1:14 PM, Bill Lorensen <bill.lorensen at gmail.com>wrote:

> Try itkVectorResampleImageFilter instead of itkResampleImageFilter.
>
> On Wed, Sep 30, 2009 at 3:58 PM, Darren Weber
> <darren.weber.lists at gmail.com> wrote:
> >
> > There may be the same build problem when using itk::Vector< float, 3 > as
> > the pixel type (instead of itk::RGBPixel).  See the attached src code and
> > uncomment lines 477--491 to see the build errors (with ITK 3.14.0).
> >
> >
> >
> > On Tue, Sep 29, 2009 at 7:12 PM, Darren Weber <
> darren.weber.lists at gmail.com>
> > wrote:
> >>
> >> Please find attached a src file to calculate a registration (based on
> >> scalar image data).  The final transform should be applied to RGB
> images.
> >> Example data files are available here:
> >>
> >> ftp://ftp.buckinstitute.org/dweber/itkRegistrationFiles.tar.gz
> >>
> >> The program can be called using this example data as:
> >> $HOME/bin/itkImageCoregistration \
> >> ./w1/bw/section0178_w1.tif \
> >> ./w1/bw/section0179_w1.tif \
> >> ./w1/bw_align/section0179to0178_w1.tif \
> >> ./w1/tif/section0178_w1.tif \
> >> ./w1/tif/section0179_w1.tif \
> >> ./w1/tif_align/section0179to0178_w1.tif \
> >> ./w1/bw_align/section0179to0178_w1_DiffBefore.tif \
> >> ./w1/bw_align/section0179to0178_w1_DiffAfter.tif
> >>
> >> The src builds when lines 474-488 are commented out, but otherwise
> >> resampling the RGB data fails in compile-time errors (ITK 3.14), i.e.:
> >>
> >> [100%] Building CXX object
> >> CMakeFiles/itkImageCoregistration.dir/itkImageCoregistration.o
> >> /opt/local/include/InsightToolkit-3.14/Common/itkConceptChecking.h: In
> >> member function ‘void
> >> itk::Concept::HasNumericTraits<T>::Constraints::constraints() [with T =
> >> main(int, char**)::rgbPixelType]’:
> >> /opt/local/include/InsightToolkit-3.14/Common/itkConceptChecking.h:580:
> >> instantiated from ‘itk::Concept::HasNumericTraits<main(int,
> >> char**)::rgbPixelType>’
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.h:252:
> >> instantiated from ‘itk::ResampleImageFilter<main(int,
> char**)::rgbImageType,
> >> main(int, char**)::rgbImageType, double>’
> >>
> >>
> /Users/dweber/src/kitware/itkImageCoregistration/itkImageCoregistration.cxx:475:
> >> instantiated from here
> >> /opt/local/include/InsightToolkit-3.14/Common/itkConceptChecking.h:571:
> >> error: ‘IsPositive’ is not a member of ‘itk::NumericTraits<main(int,
> >> char**)::rgbPixelType>’
> >> /opt/local/include/InsightToolkit-3.14/Common/itkConceptChecking.h:572:
> >> error: ‘IsNonpositive’ is not a member of ‘itk::NumericTraits<main(int,
> >> char**)::rgbPixelType>’
> >> /opt/local/include/InsightToolkit-3.14/Common/itkConceptChecking.h:573:
> >> error: ‘IsNegative’ is not a member of ‘itk::NumericTraits<main(int,
> >> char**)::rgbPixelType>’
> >> /opt/local/include/InsightToolkit-3.14/Common/itkConceptChecking.h:574:
> >> error: ‘IsNonnegative’ is not a member of ‘itk::NumericTraits<main(int,
> >> char**)::rgbPixelType>’
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.txx:
> >> In member function ‘void itk::ResampleImageFilter<TInputImage,
> TOutputImage,
> >> TInterpolatorPrecisionType>::NonlinearThreadedGenerateData(const
> typename
> >> TOutputImage::RegionType&, int) [with TInputImage = main(int,
> >> char**)::rgbImageType, TOutputImage = main(int, char**)::rgbImageType,
> >> TInterpolatorPrecisionType = double]’:
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.txx:183:
> >> instantiated from ‘void itk::ResampleImageFilter<TInputImage,
> TOutputImage,
> >> TInterpolatorPrecisionType>::ThreadedGenerateData(const typename
> >> TOutputImage::RegionType&, int) [with TInputImage = main(int,
> >> char**)::rgbImageType, TOutputImage = main(int, char**)::rgbImageType,
> >> TInterpolatorPrecisionType = double]’
> >>
> >>
> /Users/dweber/src/kitware/itkImageCoregistration/itkImageCoregistration.cxx:542:
> >> instantiated from here
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.txx:288:
> >> error: no match for ‘operator>’ in ‘value > maxOutputValue’
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.txx:
> >> In member function ‘void itk::ResampleImageFilter<TInputImage,
> TOutputImage,
> >> TInterpolatorPrecisionType>::LinearThreadedGenerateData(const typename
> >> TOutputImage::RegionType&, int) [with TInputImage = main(int,
> >> char**)::rgbImageType, TOutputImage = main(int, char**)::rgbImageType,
> >> TInterpolatorPrecisionType = double]’:
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.txx:192:
> >> instantiated from ‘void itk::ResampleImageFilter<TInputImage,
> TOutputImage,
> >> TInterpolatorPrecisionType>::ThreadedGenerateData(const typename
> >> TOutputImage::RegionType&, int) [with TInputImage = main(int,
> >> char**)::rgbImageType, TOutputImage = main(int, char**)::rgbImageType,
> >> TInterpolatorPrecisionType = double]’
> >>
> >>
> /Users/dweber/src/kitware/itkImageCoregistration/itkImageCoregistration.cxx:542:
> >> instantiated from here
> >>
> >>
> /opt/local/include/InsightToolkit-3.14/BasicFilters/itkResampleImageFilter.txx:467:
> >> error: no match for ‘operator>’ in ‘value > maxOutputValue’
> >> gmake[2]: ***
> >> [CMakeFiles/itkImageCoregistration.dir/itkImageCoregistration.o] Error 1
> >> gmake[1]: *** [CMakeFiles/itkImageCoregistration.dir/all] Error 2
> >> gmake: *** [all] Error 2
> >>
> >>
> >>
> >> Many TIA,
> >> Darren
> >>
> >
> >
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