[Insight-users] SimpleITK testing in Python

Matt McCormick matt.mccormick at kitware.com
Wed Nov 30 18:22:37 EST 2011


Hi Dave,

Please try

  git submodule update --init

at the top of the source tree.

Thanks,
Matt

On Wed, Nov 30, 2011 at 6:10 PM, David Welch <david.m.welch at gmail.com> wrote:
> Thanks, Bill.  The tests run, but almost all fail.  Using the -VV flag, I see the first ~10 are looking for the Input/ directory from the SimpleITKData repository.  How do I point CTest (or SITK) to this directory?
>
> -Dave
>
> --
> David Welch
> david.m.welch at gmail.com
>
>
>
> On 30Nov, 2011, at 1:53 PM, Bill Lorensen wrote:
>
>> Try typing ctest at the top[ of your build tree.
>>
>>
>> On Wed, Nov 30, 2011 at 2:41 PM, David Welch <david.m.welch at gmail.com> wrote:
>>> Hello all,
>>> I've installed SimpleITK with Python wrapping and testing ON, but now that
>>> I've finished my build, I cannot see how to test it.  After building with
>>> CMake, I did the following:
>>> *******************************************
>>> $ cd Wrapping/
>>> $ python PythonPackage/setup.py install
>>> $ python
>>>>>> import SimpleITK as sitk
>>>>>> sitk.test("1")
>>> Traceback (most recent call last):
>>>   File "<stdin>", line 1, in <module>
>>> AttributeError: 'module' object has no attribute 'test'
>>> *******************************************
>>> Looking at the SimpleITK Jira site, there is a Python virtualenv to test the
>>> python install ( https://issues.itk.org/jira/browse/SIMPLEITK-163 ) but it
>>> doesn't seem to address testing SimpleITK itself.
>>> In the build folder, there is a Testing/Unit/PythonTests folder with many
>>> test files, but running them from the command line gives an error "Usage:
>>> FooBar tag <input(s)> output".  I can't find any documentation to help me,
>>> either.
>>> Cheers,
>>> Dave
>>> ----
>>> David Welch
>>> david.m.welch at gmail.com
>>>
>>> Something you entered
>>> transcended parameters.
>>> So much is unknown.
>>> -Salon Magazine, Error Haiku Challenge
>>>
>>>
>>>
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>>
>>
>>
>> --
>> Unpaid intern in BillsBasement at noware dot com
>
> _____________________________________
> Powered by www.kitware.com
>
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
>
> Kitware offers ITK Training Courses, for more information visit:
> http://www.kitware.com/products/protraining.html
>
> Please keep messages on-topic and check the ITK FAQ at:
> http://www.itk.org/Wiki/ITK_FAQ
>
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