[Insight-users] error in DeformableRegistration1 and FEM in InsightApplication
Edwin3219
charles_ao at yahoo.com.hk
Tue Jan 3 05:34:53 EST 2012
Hi,
I am now try to use the DeformationRegistraion1 and FEM in
InsightApplication to do some image registration, but when I run both
programme, theu return me the error in
Reading config file...FEMregLMparams.txt
Example configured. E 0 0 0 0 rho 0 0 0 0
Exception caught during reference file reading
the programe can run with the default setting, but when I changed to 3D
multi-resolution, it just can read the input image whatever changes I made,
I have also download some para.file via internet, it also cant read the
input also. I am very sure the files exit after double checking with "ls"
command.
Below is the content of my para.file, hope you help me pointing out which
part is incorrect. Thanks!
% Configuration file for ITK FEM registration example
4 % Number of levels in the multi-res pyramid
4 % Maximum Level to use in the pyramid
1 1 1 % scaling at lowest level of pyramid
4 4 4 4 % pixels per elt
1.e1 1.e1 1.e1 1.e-1 % Elasticity
1.e-1 1.e-2 1.e-1 1.e-1 % Rho
1. 1. 1. 1 % image energy scaling
4 1 1 2 % NumberOfIntegrationPoints
5 5 5 5 % WidthOfMetricRegion
1 20 15 5 % MaximumIterations
1 5.0 % 0 = mean square, 1 = ncc, 2= pattern intensity, 3=MI
1.0 % Alpha
1 % DescentDirection
1 % DoLineSearch
1.e0 % TimeStep
1.e-15 % Energy Reduction Factor
3 % dimension of images
256 % Nx (image x dimension)
256 % Ny (image y dimension)
26 % Nz (image z dimension - not used if 2D)
/home/edwin/TestingData/training_001/mr_PD/PD.mhd %ReferenceFileName
/home/edwin/TestingData/training_001/mr_T1/T1.mhd %TargetFileName
0 % UseLandmarks - read the file name below if this is true
- % LandmarkFileName
./Result % ResultsFileName
0 % WriteDisplacementField
- % DisplacementsFileName
0 % WriteMeshFile
- % MeshFileName
END
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