[ITK-users] White Background on rotated image

[Matias Montroull]

Thanks Matt, I'll give it a try

On Thu, Nov 13, 2014 at 2:37 PM, Matt McCormick <matt.mccormick at kitware.com>
wrote:

> Hi Matias,
>
> This example may have a hint on how to write a series [1].
>
> HTH,
> Matt
>
> [1]
> http://itk.org/Doxygen/html/IO_2ImageReadDicomSeriesWrite_8cxx-example.html
>
> On Thu, Nov 13, 2014 at 12:18 PM, Matias Montroull <matimontg at gmail.com>
> wrote:
> > Now I have another question. This example is just for one file, is there
> a
> > way to do it for a directory containing a set of DICOM files?
> >
> > On Thu, Nov 13, 2014 at 2:16 PM, Matias Montroull <matimontg at gmail.com>
> > wrote:
> >>
> >> never mind, it was my bad. The InputPixelType was unsigned char and
> should
> >> have been unsigned short
> >>
> >> On Thu, Nov 13, 2014 at 2:14 PM, Matias Montroull <matimontg at gmail.com>
> >> wrote:
> >>>
> >>> Bradley, as soon as I enter this line of code:
> >>>
> >>> typedef itk::GDCMImageIO ImageIOType;
> >>> ImageIOType::Pointer gdcmImageIO = ImageIOType::New();
> >>> writer->SetImageIO(gdcmImageIO);
> >>>
> >>> I get a bad image as result.. any ideas what could it be?
> >>>
> >>> On Thu, Nov 13, 2014 at 11:36 AM, Bradley Lowekamp
> >>> <blowekamp at mail.nih.gov> wrote:
> >>>>
> >>>> Hello again,
> >>>>
> >>>> This is a non-trivial task where caution in needed to determine which
> >>>> tags should be copied. But here is a basic example here:
> >>>> http://itk.org/Wiki/ITK/Examples/DICOM/ResampleDICOM
> >>>>
> >>>> Brad
> >>>>
> >>>> On Nov 13, 2014, at 9:30 AM, Matias Montroull <matimontg at gmail.com>
> >>>> wrote:
> >>>>
> >>>> I have one more question, it seems the writer method removes lot of
> tags
> >>>> from the image, is there an option to keep the original tags such as
> patient
> >>>> name, model, manufacture etc?
> >>>>
> >>>> On Thu, Nov 13, 2014 at 11:27 AM, Matias Montroull <
> matimontg at gmail.com>
> >>>> wrote:
> >>>>>
> >>>>> Bradley, I must say you're the man! that did the trick, thanks a lot!
> >>>>>
> >>>>> On Thu, Nov 13, 2014 at 10:59 AM, Bradley Lowekamp
> >>>>> <blowekamp at mail.nih.gov> wrote:
> >>>>>>
> >>>>>> Hello,
> >>>>>>
> >>>>>> Check out the ImageToImageFilter::SetDefaultPixelValue method [1].
> >>>>>>
> >>>>>> Brad
> >>>>>>
> >>>>>> [1]
> >>>>>>
> http://www.itk.org/Doxygen/html/classitk_1_1ResampleImageFilter.html#a227397f3786a0ec4d3107cb73033b4be
> >>>>>>
> >>>>>> On Nov 13, 2014, at 8:56 AM, Matias Montroull <matimontg at gmail.com>
> >>>>>> wrote:
> >>>>>>
> >>>>>> Hi,
> >>>>>>
> >>>>>> I'm running this example:
> >>>>>>
> >>>>>>
> http://www.itk.org/Doxygen/html/Filtering_2ResampleImageFilter3_8cxx-example.html
> >>>>>>
> >>>>>> and I'm getting this result which is fine but I need the white
> >>>>>> sections left due to the rotation to be black. how can I achieve
> this?
> >>>>>>
> >>>>>> <Capture.JPG>
> >>>>>>
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> >>>>>>
> >>>>>
> >>>>
> >>>>
> >>>
> >>
> >
> >
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