[ITK-users] [ITK-dev] [ANN] ITK 4.9 Release Candidate 1 is ready for testing!
Simon Alexander
skalexander at gmail.com
Tue Dec 1 09:39:38 EST 2015
Ok, that makes sense. Would it be sensible to change the threshold for
those on debug builds?
On Tue, 1 Dec 2015 at 09:22 Dženan Zukić <dzenanz at gmail.com> wrote:
> If you are running tests in debug, some of them are too slow and time out.
>
> On Tue, Dec 1, 2015 at 9:19 AM, Simon Alexander <skalexander at gmail.com>
> wrote:
>
>> Hi Matt,
>>
>> So I pulled origin/master and rebuilt last night. I have different
>> failures now, all by timeout:
>>
>> *Total Test time (real) = 6363.39 sec*
>>
>> *The following tests FAILED:*
>> * 726 - itkFastMarchingImageFilterTest_wm_multipleSeeds_NoTopo
>> (Timeout)*
>> * 727 - itkFastMarchingImageFilterTest_wm_multipleSeeds_StrictTopo
>> (Timeout)*
>> * 728 -
>> itkFastMarchingImageFilterTest_wm_multipleSeeds_NoHandlesTopo (Timeout)*
>> * 2025 -
>> itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest (Timeout)*
>> *Errors while running CTest*
>>
>>
>> Any thoughts on what's going on there?
>>
>>
>> On Mon, 30 Nov 2015 at 20:42 Matt McCormick <matt.mccormick at kitware.com>
>> wrote:
>>
>>> Hi Simon,
>>>
>>> I am returning from holiday, and also catching up on activity.
>>>
>>>
>>> Hyun Jae has taken care of the KWStyle warnings and the data conversion
>>> warning:
>>>
>>> http://review.source.kitware.com/#/c/20430/
>>> http://review.source.kitware.com/#/c/20446/
>>>
>>>
>>> And Dzenan and Bill have addressed Wiki examples errors:
>>>
>>> https://github.com/InsightSoftwareConsortium/ITKWikiExamples/pull/3
>>>
>>>
>>> It is likely that the test failures on your build still remain. Did you
>>> want to take them on?
>>>
>>> Thanks,
>>> Matt
>>>
>>> On Mon, Nov 30, 2015 at 2:00 PM, Dženan Zukić <dzenanz at gmail.com> wrote:
>>>
>>>> Looking at the master branch is the right thing to do. I am not doing
>>>> any active development regarding this right now.
>>>>
>>>> On Mon, Nov 30, 2015 at 1:53 PM, Simon Alexander <skalexander at gmail.com
>>>> > wrote:
>>>>
>>>>> Hi All,
>>>>>
>>>>> I had hoped to be able to look at this over the weekend, but no such
>>>>> luck. Is there somewhere useful I can help with it now? Not sure what
>>>>> state we are in (or what branch).
>>>>>
>>>>> On Wed, 25 Nov 2015 at 16:41 Dženan Zukić <dzenanz at gmail.com> wrote:
>>>>>
>>>>>> It turns out that all the compile errors were occurring in
>>>>>> WikiExamples. I solved all except one:
>>>>>> ITK_FIXED_PARAMETERS_ARE_DOUBLE is not defined in
>>>>>> file ITK\Modules\Remote\WikiExamples\Utilities\FileOutputWindow.cxx line
>>>>>> 23, but it should be judging from the comment on that line.
>>>>>>
>>>>>> For the rest, I created a pull request:
>>>>>> https://github.com/InsightSoftwareConsortium/ITKWikiExamples/pull/3
>>>>>>
>>>>>> On Wed, Nov 25, 2015 at 4:08 PM, Simon Alexander <
>>>>>> skalexander at gmail.com> wrote:
>>>>>>
>>>>>>> Perfect. I'm under a deadline that is likely to eat the rest of the
>>>>>>> week but if that clears up I'll try and jump in earlier.
>>>>>>>
>>>>>>> On Wed, 25 Nov 2015 at 16:06 Dženan Zukić <dzenanz at gmail.com> wrote:
>>>>>>>
>>>>>>>> OK I will work on it for an hour or two now, and I will make a
>>>>>>>> branch and push it to Gerrit so whoever wants can pick up from there and
>>>>>>>> keep updating it.
>>>>>>>>
>>>>>>>> On Wed, Nov 25, 2015 at 4:02 PM, Simon Alexander <
>>>>>>>> skalexander at gmail.com> wrote:
>>>>>>>>
>>>>>>>>> Makes sense. At this point I am unlikely to have time to look at
>>>>>>>>> this until Saturday, but have hopes for a few free hours there.
>>>>>>>>>
>>>>>>>>> On Wed, 25 Nov 2015 at 15:58 Dženan Zukić <dzenanz at gmail.com>
>>>>>>>>> wrote:
>>>>>>>>>
>>>>>>>>>> Building git master from Nov 23rd with examples and testing
>>>>>>>>>> enabled I get 14 compile errors in VS2015 debug x64. Should we coordinate
>>>>>>>>>> our efforts in fixing them?
>>>>>>>>>>
>>>>>>>>>> On Wed, Nov 25, 2015 at 11:29 AM, Simon Alexander <
>>>>>>>>>> skalexander at gmail.com> wrote:
>>>>>>>>>>
>>>>>>>>>>> Two of the three failures look like truncation issues (like
>>>>>>>>>>> https://open.cdash.org/testDetails.php?test=395263772&build=4117158
>>>>>>>>>>> )
>>>>>>>>>>>
>>>>>>>>>>> The other (
>>>>>>>>>>> https://open.cdash.org/testDetails.php?test=395264938&build=4117158)
>>>>>>>>>>> is less obvious.
>>>>>>>>>>>
>>>>>>>>>>> If I have time this evening I'll try and have a look at these.
>>>>>>>>>>>
>>>>>>>>>>> Is your standard test build in 32 bit ? That might explain the
>>>>>>>>>>> difference if there are some underlying type assumptions, but not obvious
>>>>>>>>>>> why 2015 would trigger but not 2013.
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> On Wed, 25 Nov 2015 at 11:01 Matt McCormick <
>>>>>>>>>>> matt.mccormick at kitware.com> wrote:
>>>>>>>>>>>
>>>>>>>>>>>> Ah, cool! Here:
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> https://open.cdash.org/viewBuildError.php?type=1&buildid=4117158
>>>>>>>>>>>>
>>>>>>>>>>>> Could you please look into the test failures?
>>>>>>>>>>>>
>>>>>>>>>>>> @Hyun Jae, could you please look into the KWStyle warnings?
>>>>>>>>>>>>
>>>>>>>>>>>> Thanks,
>>>>>>>>>>>> Matt
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> On Wed, Nov 25, 2015 at 10:55 AM, Simon Alexander <
>>>>>>>>>>>> skalexander at gmail.com> wrote:
>>>>>>>>>>>> > Sorry, if I wasn't clear - I submitted two builds yesterday
>>>>>>>>>>>> from SIMON-LAP,
>>>>>>>>>>>> > (actually 3 as I wasn't sure the config was right on the
>>>>>>>>>>>> first one). VS2013
>>>>>>>>>>>> > was green, three failures on VS2015 (and 18 warnings).
>>>>>>>>>>>> Looks like a
>>>>>>>>>>>> > truncation problem on the resuts.
>>>>>>>>>>>> >
>>>>>>>>>>>> > On Wed, 25 Nov 2015 at 10:51 Matt McCormick <
>>>>>>>>>>>> matt.mccormick at kitware.com>
>>>>>>>>>>>> > wrote:
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> Hi Simon,
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> Thanks for testing.
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> We have a Visual Studio 2015 build on the dashboard that is
>>>>>>>>>>>> green:
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> https://open.cdash.org/buildSummary.php?buildid=4117955
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> Are there any different flags? Could you please submit an
>>>>>>>>>>>> Experimental
>>>>>>>>>>>> >> build?
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> ctest -j 4 -M Experimental -T Configure -T Build -T Test
>>>>>>>>>>>> -T Submit -C
>>>>>>>>>>>> >> Release
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> from a fresh build tree.
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> Thanks,
>>>>>>>>>>>> >> Matt
>>>>>>>>>>>> >>
>>>>>>>>>>>> >> On Wed, Nov 25, 2015 at 9:07 AM, Simon Alexander <
>>>>>>>>>>>> skalexander at gmail.com>
>>>>>>>>>>>> >> wrote:
>>>>>>>>>>>> >> > Looks like a few problems with x64 build on visual studio
>>>>>>>>>>>> 2015 - do you
>>>>>>>>>>>> >> > have
>>>>>>>>>>>> >> > a test machine in this configuration?
>>>>>>>>>>>> >> >
>>>>>>>>>>>> >> > On Mon, 23 Nov 2015 at 17:53 Matt McCormick <
>>>>>>>>>>>> matt.mccormick at kitware.com>
>>>>>>>>>>>> >> > wrote:
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> On behalf of the Insight Toolkit community, we are proud
>>>>>>>>>>>> to announce
>>>>>>>>>>>> >> >> that
>>>>>>>>>>>> >> >> ITK 4.9 release candidate 1 has been tagged and is
>>>>>>>>>>>> available for
>>>>>>>>>>>> >> >> testing!
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Please take this opportunity to test the new features in
>>>>>>>>>>>> the release
>>>>>>>>>>>> >> >> candidate.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> To obtain the source code,
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> git clone http://itk.org/ITK.git
>>>>>>>>>>>> >> >> cd ITK
>>>>>>>>>>>> >> >> git checkout -q --detach v4.9rc01
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> For more details, please see the Git documentation [1].
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> A few selected highlights for this release:
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * New Remote modules: the Cuberille module for smooth
>>>>>>>>>>>> generation of
>>>>>>>>>>>> >> >> meshes
>>>>>>>>>>>> >> >> from binary segmentation images, and the
>>>>>>>>>>>> AnisotropicDiffusionLBR module
>>>>>>>>>>>> >> >> improved edge-preserving smoothing.
>>>>>>>>>>>> >> >> * Build your own ITK module outside the source tree, add
>>>>>>>>>>>> continuous
>>>>>>>>>>>> >> >> integration testing on GitHub, and easily add Python
>>>>>>>>>>>> wrapping for your
>>>>>>>>>>>> >> >> C++
>>>>>>>>>>>> >> >> algorithms.
>>>>>>>>>>>> >> >> * Python wrapping, including Python 3, builds faster with
>>>>>>>>>>>> a more
>>>>>>>>>>>> >> >> standard
>>>>>>>>>>>> >> >> installation
>>>>>>>>>>>> >> >> * Improved performance of itk::Image::GetPixel and
>>>>>>>>>>>> operations on
>>>>>>>>>>>> >> >> itk::VariableLengthVector’s
>>>>>>>>>>>> >> >> * Generate a FlatStructuringElement from an image
>>>>>>>>>>>> >> >> * Point-set registration with time-varying B-splines
>>>>>>>>>>>> >> >> * Module dependencies can now be specified as public /
>>>>>>>>>>>> private /
>>>>>>>>>>>> >> >> compile /
>>>>>>>>>>>> >> >> test
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Please test the release candidate and share your
>>>>>>>>>>>> experiences on the
>>>>>>>>>>>> >> >> mailing list, issue tracker, and Gerrit Code Review. The
>>>>>>>>>>>> new module
>>>>>>>>>>>> >> >> dependency specification mechanism may unearth missing
>>>>>>>>>>>> dependencies for
>>>>>>>>>>>> >> >> projects that use ITK COMPONENTS with the CMake
>>>>>>>>>>>> find_package command.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> An Experimental build, which demonstrates how the test
>>>>>>>>>>>> suite performs
>>>>>>>>>>>> >> >> on
>>>>>>>>>>>> >> >> your local build system, can be submitted to the
>>>>>>>>>>>> dashboard [2] with:
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> mkdir ../ITK-build
>>>>>>>>>>>> >> >> cd ../ITK-build
>>>>>>>>>>>> >> >> cmake ../ITK
>>>>>>>>>>>> >> >> ctest -j 4 -M Experimental -T Configure -T Build -T
>>>>>>>>>>>> Test -T Submit
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Visual Studio builds must also add “-C Release” to the
>>>>>>>>>>>> ctest command.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Notify the mailing list if there are any unexpected
>>>>>>>>>>>> failures. Testing
>>>>>>>>>>>> >> >> your own applications against the RC is also appreciated.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Congratulations and well done to the 35 contributors to
>>>>>>>>>>>> this release.
>>>>>>>>>>>> >> >> We
>>>>>>>>>>>> >> >> would especially like to recognize the new contributors:
>>>>>>>>>>>> Mikhail
>>>>>>>>>>>> >> >> Isakov,
>>>>>>>>>>>> >> >> Betsy McPhail, Alexander Leinoff, Shawn Waldon, Tobias
>>>>>>>>>>>> Wood, Seun
>>>>>>>>>>>> >> >> Odutola,
>>>>>>>>>>>> >> >> Hyun Jae Kang, Lucas Gandel, Adam Snyder, Junjie Bai,
>>>>>>>>>>>> Pablo
>>>>>>>>>>>> >> >> Hernandez-Cerdan, Abhishek Tiwari, Eugene Prilepin, Zach
>>>>>>>>>>>> Williamson,
>>>>>>>>>>>> >> >> Luc
>>>>>>>>>>>> >> >> Hermitte, Laurentiu Nicola, and Floris Berendsen.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> The final release is scheduled for mid-December.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> [1] http://www.itk.org/Wiki/ITK/Git
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> [2] http://open.cdash.org/index.php?project=Insight
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> New Features
>>>>>>>>>>>> >> >> ---------------------
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Wrapping improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Python 3 supported
>>>>>>>>>>>> >> >> * Wrapping builds much faster due to CastXML binaries
>>>>>>>>>>>> >> >> * LandmarkBasedTransformInitializer now wrapped
>>>>>>>>>>>> >> >> * NumPy bridge with VisualStudio
>>>>>>>>>>>> >> >> * Wrapping for the MinimalPathExtraction module
>>>>>>>>>>>> >> >> * Wrapping is now installed into Python’s site-packages
>>>>>>>>>>>> directory in
>>>>>>>>>>>> >> >> the
>>>>>>>>>>>> >> >> “itk” package
>>>>>>>>>>>> >> >> * Wrapping package size is decreased
>>>>>>>>>>>> >> >> * Better package portability on Mac OSX
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> New Remote Modules
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Cuberille
>>>>>>>>>>>> >> >> * Insight Journal Article:
>>>>>>>>>>>> http://hdl.handle.net/10380/3186
>>>>>>>>>>>> >> >> * AnisotropicDiffusionLBR
>>>>>>>>>>>> >> >> * Insight Journal Article:
>>>>>>>>>>>> http://hdl.handle.net/10380/3505
>>>>>>>>>>>> >> >> * Web browser reproducibility:
>>>>>>>>>>>> >> >> http://www.kitware.com/blog/home/post/942
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Core Improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * External Modules can now be developed outside of the
>>>>>>>>>>>> ITK source tree
>>>>>>>>>>>> >> >> and
>>>>>>>>>>>> >> >> on GitHub
>>>>>>>>>>>> >> >> * Details: http://www.kitware.com/blog/home/post/997
>>>>>>>>>>>> >> >> * New utilities in itk::Math:
>>>>>>>>>>>> >> >> * AlmostEquals
>>>>>>>>>>>> >> >> * NotAlmostEquals
>>>>>>>>>>>> >> >> * ExactlyEquals
>>>>>>>>>>>> >> >> * NotExactlyEquals
>>>>>>>>>>>> >> >> * New itk::NumericTraits
>>>>>>>>>>>> >> >> * IsInteger
>>>>>>>>>>>> >> >> * IsSigned
>>>>>>>>>>>> >> >> * Improved C++11 support
>>>>>>>>>>>> >> >> * New ITK_DELETE_FUNCTION macro for “=delete”
>>>>>>>>>>>> >> >> * New ITK_NOEXCEPT macro for the “noexcept” keyword
>>>>>>>>>>>> >> >> * Improved capabilities of itk::ResourceProbe and
>>>>>>>>>>>> >> >> itk::ResourceProbesCollectorBase
>>>>>>>>>>>> >> >> * Improve numerical stability in VNL eigen system
>>>>>>>>>>>> estimation
>>>>>>>>>>>> >> >> * itksys_ios:: and itksys_stl:: have been remove (use
>>>>>>>>>>>> std::)
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Filtering Improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Generate a FlatStructuringElement from an image
>>>>>>>>>>>> >> >> * WarpImageFilter support VectorImage’s
>>>>>>>>>>>> >> >> * ConvertLabelMap supports different LabelMap types
>>>>>>>>>>>> >> >> * ImageToPathFilter moved from the ITKReview to the
>>>>>>>>>>>> ITKPath module
>>>>>>>>>>>> >> >> * itk::MovingHistogramImageFilter moved to the
>>>>>>>>>>>> ITKImageFilterBase
>>>>>>>>>>>> >> >> module
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Registration Improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Point-set registration with time-varying B-splines
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Build Improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Module dependencies can now be specified as public /
>>>>>>>>>>>> private /
>>>>>>>>>>>> >> >> compile /
>>>>>>>>>>>> >> >> test
>>>>>>>>>>>> >> >> * BUILD_EXAMPLES CMake option is now OFF by default
>>>>>>>>>>>> >> >> * Option to export all library symbols on Windows:
>>>>>>>>>>>> >> >> * Details: http://www.kitware.com/blog/home/post/939
>>>>>>>>>>>> >> >> * Expat third party library is now name mangled
>>>>>>>>>>>> >> >> * Many more modules can be built as shared libraries
>>>>>>>>>>>> >> >> * KWStyle is automatically built and configured when
>>>>>>>>>>>> tests are built
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Performance Improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * New MetaProgrammingLibrary namespace (itk::mpl) holds
>>>>>>>>>>>> members for
>>>>>>>>>>>> >> >> metaprogramming
>>>>>>>>>>>> >> >> * itk::mpl::{TrueType,FalseType}
>>>>>>>>>>>> >> >> * itk::mpl::{If,Not,And,Or,Xor}
>>>>>>>>>>>> >> >> * itk::mpl::EnableIf
>>>>>>>>>>>> >> >> * itk::mpl::IsBaseOf
>>>>>>>>>>>> >> >> * itk::mpl::IsConvertible
>>>>>>>>>>>> >> >> * itk::mpl::IsNumber
>>>>>>>>>>>> >> >> * itk::mpl::IsSame
>>>>>>>>>>>> >> >> * itk::mpl::PromoteType
>>>>>>>>>>>> >> >> * Image::GetPixel performance improvements
>>>>>>>>>>>> >> >> * Many itk::VariableLengthVector performance improvements
>>>>>>>>>>>> >> >> * AdaptiveHistogramEqualization uses a moving histogram
>>>>>>>>>>>> >> >> * WarpImageFilter performance improvements
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Documentation Improvements
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Updates to the Software Guide, Doxygen, Wiki and Sphinx
>>>>>>>>>>>> Examples
>>>>>>>>>>>> >> >> * ITK Software Guide improvements
>>>>>>>>>>>> >> >> * How to use Python wrapping
>>>>>>>>>>>> >> >> * How to create an ITK module
>>>>>>>>>>>> >> >> * Improvements to segmentation examples
>>>>>>>>>>>> >> >> * Expanded Canny edge detection example
>>>>>>>>>>>> >> >> * Expanded tree container example
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Third Party Library Updates
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * FFTW updated to latest upstream
>>>>>>>>>>>> >> >> * Build with recent OpenCV 2 and 3
>>>>>>>>>>>> >> >> * Build with the latest VTK
>>>>>>>>>>>> >> >> * PNG update to the latest upstream
>>>>>>>>>>>> >> >> * GDCM updated to the latest upstream
>>>>>>>>>>>> >> >> * KWSys updated to the latest upstream
>>>>>>>>>>>> >> >> * MINC updated to the latest upstream
>>>>>>>>>>>> >> >> * SWIG updated to the latest upstream
>>>>>>>>>>>> >> >> * Third party PNG and MINC are now Git subtrees
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Style improvements -- ITK gets more stylish with every
>>>>>>>>>>>> release!
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * Private copy constructors and operator= use
>>>>>>>>>>>> ITK_DELETE_FUNCTION
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Improved code coverage -- we are at 84.9%!
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * *Lots* of important bug fixes
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> * And much more! See details in the log below.
>>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Changes from v4.8.0..v4.9rc01
>>>>>>>>>>>> >> >> --------------------------------------------
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Abhishek Tiwari (1):
>>>>>>>>>>>> >> >> BUG: "tmpImageIndex" not initialized to 0.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Adam Snyder (1):
>>>>>>>>>>>> >> >> PERF: Reworked MMI Threading using a per-thread
>>>>>>>>>>>> buffer
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Alexander Leinoff (6):
>>>>>>>>>>>> >> >> ENH: Adds IsInteger and IsSigned to NumericTraits.
>>>>>>>>>>>> >> >> COMP: Doxygen itkMath.h 'OneValue()' could not be
>>>>>>>>>>>> resolved.
>>>>>>>>>>>> >> >> ENH: Adds ExactlyEquals and NotExactlyEquals
>>>>>>>>>>>> functions to
>>>>>>>>>>>> >> >> itkMath.h
>>>>>>>>>>>> >> >> COMP: Removes floating-point equality checks
>>>>>>>>>>>> >> >> ENH: COMP: Adds support for complex values to
>>>>>>>>>>>> Math::AlmostEquals
>>>>>>>>>>>> >> >> ENH: Updates fftw dependency
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Arnaud Gelas (5):
>>>>>>>>>>>> >> >> COMP: fix warning (unused local typedef)
>>>>>>>>>>>> >> >> COMP: simplify ITKVideoBridgeOpenCV dependency
>>>>>>>>>>>> >> >> DOC: add doxgen documentation for
>>>>>>>>>>>> >> >> BinaryImageToLevelSetImageAdaptor
>>>>>>>>>>>> >> >> ENH: add tests to exercise
>>>>>>>>>>>> itk::ThreadedIteratorRangePartitioner
>>>>>>>>>>>> >> >> COMP: fix compilation error with OpenCV2 and OpenCV3
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Betsy McPhail (1):
>>>>>>>>>>>> >> >> BUG: Improve buffer alignment in OctreeNode .
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Bill Hoffman (2):
>>>>>>>>>>>> >> >> ENH: Use new CMake Windows export symbol dll feature.
>>>>>>>>>>>> >> >> COMP: Put vnl_export.h in the list of sources so it
>>>>>>>>>>>> gets
>>>>>>>>>>>> >> >> installed.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Bill Lorensen (4):
>>>>>>>>>>>> >> >> COMP: VTkGlue linker errors
>>>>>>>>>>>> >> >> BUG: Inappropriate use of AlmostEquals
>>>>>>>>>>>> >> >> ENH: Bump tag for wiki examples
>>>>>>>>>>>> >> >> ENH: Better layout strategy
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Brad King (3):
>>>>>>>>>>>> >> >> ENH: Remove use of include <itksys/ios/*> and
>>>>>>>>>>>> itksys_ios::*
>>>>>>>>>>>> >> >> ENH: Remove use of include <itksys/stl/*> and
>>>>>>>>>>>> itksys_stl::*
>>>>>>>>>>>> >> >> ENH: Update CMake Policy settings in
>>>>>>>>>>>> Testing/TestExternal project
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Bradley Lowekamp (31):
>>>>>>>>>>>> >> >> BUG: Avoid null deference in PrintSelf with default
>>>>>>>>>>>> construction
>>>>>>>>>>>> >> >> ENH: Enable base classes for templates of landmark
>>>>>>>>>>>> initializer
>>>>>>>>>>>> >> >> STYLE: Use "Swap" for ITK member name
>>>>>>>>>>>> >> >> BUG: Demonstrate Eigen analysis failure
>>>>>>>>>>>> >> >> BUG: Fix computation of Eigen analysis
>>>>>>>>>>>> >> >> ENH: Update DiscreteHessianGaussian Test baseline
>>>>>>>>>>>> >> >> ENH: Correctly demonstrate float point Eigen failure
>>>>>>>>>>>> >> >> ENH: compile vnl_math_hypot, and use at least double
>>>>>>>>>>>> >> >> ENH: Adding initial update script from used libpng
>>>>>>>>>>>> version.
>>>>>>>>>>>> >> >> ENH: removing non-subtree files for itkpng
>>>>>>>>>>>> >> >> ENH: Ported ITK changes for building to subtree
>>>>>>>>>>>> merged code
>>>>>>>>>>>> >> >> ENH: Update libpng update script for v1.6.9
>>>>>>>>>>>> >> >> BUG: Use ParameterValueType for computation of
>>>>>>>>>>>> landmark affine
>>>>>>>>>>>> >> >> ENH: Wrap LandmarkBasedTransformInitializer
>>>>>>>>>>>> >> >> BUG: Avoid potential exception in
>>>>>>>>>>>> itk::Object::UnRegister
>>>>>>>>>>>> >> >> ENH: Update itkpng zlib, configuration, and rename
>>>>>>>>>>>> >> >> ENH: Update itkpng name mangling
>>>>>>>>>>>> >> >> BUG: Use const pointer in Set method for constant
>>>>>>>>>>>> ReferenceImage
>>>>>>>>>>>> >> >> ivar
>>>>>>>>>>>> >> >> BUG: Increase tolerance for
>>>>>>>>>>>> PhysicsBasedNonRigidRegistrationMethod
>>>>>>>>>>>> >> >> BUG: Demonstrate side effect on registration due to
>>>>>>>>>>>> BSplineScatter
>>>>>>>>>>>> >> >> change
>>>>>>>>>>>> >> >> ENH: Move MovingHistogramImageFilter base classes to
>>>>>>>>>>>> >> >> ImageFilterBase
>>>>>>>>>>>> >> >> BUG: Avoid potential exception in
>>>>>>>>>>>> itk::Object::UnRegister
>>>>>>>>>>>> >> >> BUG: Avoid null deference in PrintSelf with default
>>>>>>>>>>>> construction
>>>>>>>>>>>> >> >> BUG: Use const pointer in Set method for constant
>>>>>>>>>>>> ReferenceImage
>>>>>>>>>>>> >> >> ivar
>>>>>>>>>>>> >> >> ENH: Optimize AdaptiveHistogramEqualization with
>>>>>>>>>>>> MovingHistogram
>>>>>>>>>>>> >> >> base
>>>>>>>>>>>> >> >> COMP: address sign unsigned comparison warning
>>>>>>>>>>>> >> >> COMP: Address signed unsigned comparison warning
>>>>>>>>>>>> >> >> COMP: Address unused member variable and methods in
>>>>>>>>>>>> anonymous ns
>>>>>>>>>>>> >> >> BUG: Fix segfault when with empty IsolatedWatershed
>>>>>>>>>>>> Threshold
>>>>>>>>>>>> >> >> range
>>>>>>>>>>>> >> >> BUG: Adjust intensity tolerance for
>>>>>>>>>>>> PhysicsBasedNonRigid test
>>>>>>>>>>>> >> >> BUG: Reduce number of targets with MSVC
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Davis Vigneault (7):
>>>>>>>>>>>> >> >> DOC: Minor improvements to segmentation examples.
>>>>>>>>>>>> >> >> DOC: Expanded Canny Edge Detection Example
>>>>>>>>>>>> >> >> DOC: Expanded TreeContainer Example
>>>>>>>>>>>> >> >> COMP: Warnings in itkVTKImageExport when compiling
>>>>>>>>>>>> with c++11
>>>>>>>>>>>> >> >> COMP: Warnings in FFTW Classes when compiling with
>>>>>>>>>>>> c++11
>>>>>>>>>>>> >> >> COMP: Update Git Tag for Subdivision Module
>>>>>>>>>>>> >> >> COMP: Warnings in FFTW Classes when compiling with
>>>>>>>>>>>> c++11
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Dženan Zukić (1):
>>>>>>>>>>>> >> >> STYLE: better formatting of the "usage" message
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Eugene Prilepin (1):
>>>>>>>>>>>> >> >> BUG: Fix a template name formation in python
>>>>>>>>>>>> wrappings
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Floris Berendsen (1):
>>>>>>>>>>>> >> >> STYLE: Improve naming conventions in comments.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Hans Johnson (29):
>>>>>>>>>>>> >> >> STYLE: Instrument for FixedParameters typedef
>>>>>>>>>>>> >> >> BUG: Demonstrate DisplacementTransformFailure
>>>>>>>>>>>> >> >> BUG: FixedParameters should be double precision
>>>>>>>>>>>> >> >> STYLE: Minor code style issues for MGHIO
>>>>>>>>>>>> >> >> COMP: Update to version for WikiExamples
>>>>>>>>>>>> >> >> ENH: Update Sphinx for ITK 4.8.0
>>>>>>>>>>>> >> >> ENH: Update MGHIO to be shared lib
>>>>>>>>>>>> >> >> ENH: Provide consistent floating point comparisons
>>>>>>>>>>>> >> >> BUG: Fix MGHIO to fix write failures
>>>>>>>>>>>> >> >> PERF: Remove floating point as sentinal value
>>>>>>>>>>>> >> >> COMP: Const correctness needs to be maintained
>>>>>>>>>>>> >> >> BUG: Preserve backwards compatibility
>>>>>>>>>>>> >> >> DOC: Provide consistent naming in comments
>>>>>>>>>>>> >> >> ENH: Conversion between transform type tolerance
>>>>>>>>>>>> >> >> STYLE: Prefer initialization to assignment
>>>>>>>>>>>> >> >> ENH: Missing ITK_OVERRIDE
>>>>>>>>>>>> >> >> COMP: Need to propagate ITKGDCM
>>>>>>>>>>>> >> >> COMP: Need to propagate ITKGDCM
>>>>>>>>>>>> >> >> COMP: Add missing ITK_OVERRIDE
>>>>>>>>>>>> >> >> STYLE: Minor code style issues for MGHIO
>>>>>>>>>>>> >> >> COMP: Update to version for WikiExamples
>>>>>>>>>>>> >> >> ENH: Update Sphinx for ITK 4.8.0
>>>>>>>>>>>> >> >> ENH: Update MGHIO to be shared lib
>>>>>>>>>>>> >> >> BUG: Fix MGHIO to fix write failures
>>>>>>>>>>>> >> >> ENH: C++11 allows for rigorous =delete
>>>>>>>>>>>> >> >> COMP: Remove unnecessary failing assert test
>>>>>>>>>>>> >> >> ENH: Ignore internal files for the Clion editor
>>>>>>>>>>>> >> >> COMP: Fix VNL compilation for wider C++11 support
>>>>>>>>>>>> >> >> BUG: In configuration test need to mirror code
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Hyun Jae Kang (27):
>>>>>>>>>>>> >> >> BUG: Remove std::cout calls from class
>>>>>>>>>>>> >> >> BUG: Avoid an unexpected output of static_cast
>>>>>>>>>>>> >> >> BUG: Update python example codes for
>>>>>>>>>>>> ImageRegistration
>>>>>>>>>>>> >> >> BUG: Retrieve the missed wrap file
>>>>>>>>>>>> >> >> BUG: itkVTKImageIO class does not handle blank lines
>>>>>>>>>>>> in VTK file
>>>>>>>>>>>> >> >> header.
>>>>>>>>>>>> >> >> BUG: Fix HDF5 CMake configuration with VS2015
>>>>>>>>>>>> >> >> BUG: Fix a compilation issue on ITK4 with FFTW and
>>>>>>>>>>>> shared
>>>>>>>>>>>> >> >> libraries
>>>>>>>>>>>> >> >> BUG: Fixed older XCode linking error
>>>>>>>>>>>> >> >> ENH: Use CastXML binaries when building with x86_64
>>>>>>>>>>>> Mac OS X
>>>>>>>>>>>> >> >> BUG: Remove std::cout calls from class
>>>>>>>>>>>> >> >> BUG: itkVTKImageIO class does not handle blank lines
>>>>>>>>>>>> in VTK file
>>>>>>>>>>>> >> >> header.
>>>>>>>>>>>> >> >> BUG: Fixed older XCode linking error
>>>>>>>>>>>> >> >> ENH: Add automatic KWStyle build and configuration
>>>>>>>>>>>> setup
>>>>>>>>>>>> >> >> COMP: KWStyle shadow, format-nonliteral and
>>>>>>>>>>>> autological-compare
>>>>>>>>>>>> >> >> warning.
>>>>>>>>>>>> >> >> COMP: Fixed the warning messages from itkGPU Module
>>>>>>>>>>>> >> >> COMP: Fixed a warning message of unused-private-field
>>>>>>>>>>>> >> >> COMP: Apply latest version of KWStyle
>>>>>>>>>>>> >> >> COMP: Update KWStyle to fix its additional warning
>>>>>>>>>>>> messages
>>>>>>>>>>>> >> >> COMP: Update KWStyle to fix its additional warning
>>>>>>>>>>>> messages
>>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages on Windows
>>>>>>>>>>>> >> >> ENH: Update itkResourceProbe to calculate
>>>>>>>>>>>> statistical data
>>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages on VS14
>>>>>>>>>>>> >> >> COMP: Fixed 'std::sqrt' : ambiguous call to
>>>>>>>>>>>> overloaded function
>>>>>>>>>>>> >> >> ENH: Update the Report() function of
>>>>>>>>>>>> >> >> itkResourceProbesCollectorBase
>>>>>>>>>>>> >> >> COMP: Fix data-conversion warning message on
>>>>>>>>>>>> itkResourceProbe
>>>>>>>>>>>> >> >> COMP: Fix additional warning messages of KWStyle
>>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Jon Haitz Legarreta (6):
>>>>>>>>>>>> >> >> ENH: Add test for itkStatisticsUniqueLabelMapFilter
>>>>>>>>>>>> >> >> BUG: Fix compilation issues for
>>>>>>>>>>>> StatisticsUniqueLabelMapFilterTest
>>>>>>>>>>>> >> >> BUG: Fix comparison issues for
>>>>>>>>>>>> itkStatisticsUniqueLabelMapFilter
>>>>>>>>>>>> >> >> BUG: Test for StatisticsUniqueLabelMapFilter
>>>>>>>>>>>> stability
>>>>>>>>>>>> >> >> ENH: Add test for
>>>>>>>>>>>> itkParametricStpaceToImageSpaceFilter
>>>>>>>>>>>> >> >> ENH: Improve code coverage for
>>>>>>>>>>>> >> >> itkParametricSpaceToImageSpaceMeshFilter
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Julien Michel (1):
>>>>>>>>>>>> >> >> ENH: Support of VectorImage as template parameters
>>>>>>>>>>>> for
>>>>>>>>>>>> >> >> WarpImageFilter
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Junjie Bai (2):
>>>>>>>>>>>> >> >> BUG: ConvertLabelMap with different LabelMapTypes
>>>>>>>>>>>> >> >> BUG: LabelObject CopyAttribute support different
>>>>>>>>>>>> LabelObject type
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> KWSys Robot (4):
>>>>>>>>>>>> >> >> KWSys 2015-07-10 (c9336bcf)
>>>>>>>>>>>> >> >> KWSys 2015-07-30 (f63febb7)
>>>>>>>>>>>> >> >> KWSys 2015-08-24 (cdaf522c)
>>>>>>>>>>>> >> >> KWSys 2015-08-28 (dc3fdd7f)
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> LIBPNG Upstream (2):
>>>>>>>>>>>> >> >> PNG 2009-04-06 (e68f5a36)
>>>>>>>>>>>> >> >> PNG 2014-02-05 (3e753eb8)
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Laurentiu Nicola (2):
>>>>>>>>>>>> >> >> PERF: Avoid temporary smartptr in
>>>>>>>>>>>> ProcessObject::GetInput
>>>>>>>>>>>> >> >> PERF: Optimize WarpImageFilter by avoiding refcount
>>>>>>>>>>>> bouncing
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Luc Hermitte (8):
>>>>>>>>>>>> >> >> PERF: itk::Image::GetPixel() performance improvment.
>>>>>>>>>>>> >> >> PERF: Performance enhancements on
>>>>>>>>>>>> VariableLengthVectors 1/...
>>>>>>>>>>>> >> >> ENH: Dependencies on itkVariableLengthVector.h
>>>>>>>>>>>> reduced
>>>>>>>>>>>> >> >> BUG: Error in VariableLengthVector Unit Tests
>>>>>>>>>>>> >> >> PERF: Performance enhancements on VLV 2/...
>>>>>>>>>>>> >> >> PERF: Performances enhancements on VLV 3/...
>>>>>>>>>>>> >> >> COMP: Fix signed/unsigned warnings
>>>>>>>>>>>> >> >> BUG: std::copy/fill on empty VLV
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Lucas Gandel (4):
>>>>>>>>>>>> >> >> ENH: Move ImageToPathFilter from ITKReview to
>>>>>>>>>>>> ITKPath module.
>>>>>>>>>>>> >> >> BUG: Fixing ImageToPathFilter wrapping call from
>>>>>>>>>>>> Review Module
>>>>>>>>>>>> >> >> STYLE: Fix KWStyle dashboard errors
>>>>>>>>>>>> >> >> BUG: Fix external module BUILD_SHARED_LIBS status
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Mathieu Malaterre (1):
>>>>>>>>>>>> >> >> BUG: Name mangle the included expat third party
>>>>>>>>>>>> library.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Matthew McCormick (94):
>>>>>>>>>>>> >> >> ENH: Change itkSystemInformationTest to
>>>>>>>>>>>> itkCMakeConfigurationTest.
>>>>>>>>>>>> >> >> ENH: Add AnisotropicDiffusionLBR Remote Module.
>>>>>>>>>>>> >> >> ENH: Bump ITK version to 4.9.0.
>>>>>>>>>>>> >> >> BUG: Remove std::cout calls from classes.
>>>>>>>>>>>> >> >> COMP: Remove unused argument in
>>>>>>>>>>>> ConditionVariableNoThreads.
>>>>>>>>>>>> >> >> BUG: Implement UpdateLargestPossibleRegion for
>>>>>>>>>>>> >> >> ImageToVTKImageFilter.
>>>>>>>>>>>> >> >> COMP: Add link interface specification for wrapping
>>>>>>>>>>>> >> >> target_link_libraries.
>>>>>>>>>>>> >> >> STYLE: Fix indentation in
>>>>>>>>>>>> itkMINCTransformIOFactory.cxx.
>>>>>>>>>>>> >> >> COMP: Fix MINCTransformIO factory registration.
>>>>>>>>>>>> >> >> COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with
>>>>>>>>>>>> Emscripten-1.
>>>>>>>>>>>> >> >> COMP: Remove unknown doxygen command in
>>>>>>>>>>>> AnisotropicDiffusionLBR.
>>>>>>>>>>>> >> >> BUG: Initialize mutex for 32 bit AtomicInt.
>>>>>>>>>>>> >> >> ENH: Use CastXML binaries when building with x86_64
>>>>>>>>>>>> Linux.
>>>>>>>>>>>> >> >> STYLE: Rename gccxml -> castxml in
>>>>>>>>>>>> {idx,igenerator}.py.
>>>>>>>>>>>> >> >> COMP: Disable the gold linker for static builds on
>>>>>>>>>>>> Ubuntu 14.04.
>>>>>>>>>>>> >> >> ENH: Use Windows binaries for CastXML.
>>>>>>>>>>>> >> >> ENH: Add better scoping in igenerator.py.
>>>>>>>>>>>> >> >> BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja
>>>>>>>>>>>> + MSVC.
>>>>>>>>>>>> >> >> BUG: LevelSetsv4 used signed char instead of char.
>>>>>>>>>>>> >> >> ENH: Add better scoping to idx.py.
>>>>>>>>>>>> >> >> COMP: Define newSize and oldSize in
>>>>>>>>>>>> VariableLengthVector.
>>>>>>>>>>>> >> >> STYLE: Use prefix increment operator in ImageBase.
>>>>>>>>>>>> >> >> DOC: Correct spelling of Continuous.
>>>>>>>>>>>> >> >> ENH: Add more progress information to
>>>>>>>>>>>> IterativeClosestPoint2.
>>>>>>>>>>>> >> >> BUG: Build BridgeNumPy with Visual Studio.
>>>>>>>>>>>> >> >> ENH: Add ITKModuleExternal.cmake
>>>>>>>>>>>> >> >> COMP: Wrap Image< bool, D > for
>>>>>>>>>>>> FlatStructuringElement.
>>>>>>>>>>>> >> >> BUG: Use CastXML binary built in Release.
>>>>>>>>>>>> >> >> BUG: ContinuousIndex should not be templated over
>>>>>>>>>>>> TCoordRep.
>>>>>>>>>>>> >> >> COMP: Set CMP0054 to new.
>>>>>>>>>>>> >> >> COMP: Address line length too long for Software
>>>>>>>>>>>> Guide.
>>>>>>>>>>>> >> >> COMP: Fix CannyEdgeDetectionImageFilter.cxx types.
>>>>>>>>>>>> >> >> BUG: Support Python 3 wrapping module initialization.
>>>>>>>>>>>> >> >> BUG: Update itkTemplate.py for Python 3.
>>>>>>>>>>>> >> >> BUG: Update itkExtras.py for Python 3.
>>>>>>>>>>>> >> >> BUG: Prevent Python callback addition recursion.
>>>>>>>>>>>> >> >> BUG: Fix test scripts for Python 3.
>>>>>>>>>>>> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>>>>>>>>>>>> >> >> ENH: Allow projects to build against an external
>>>>>>>>>>>> module.
>>>>>>>>>>>> >> >> ENH: Replace CABLE_CONFIGURATION with
>>>>>>>>>>>> ITK_WRAPPING_PARSER.
>>>>>>>>>>>> >> >> ENH: Rename _cable_ to _wrappers_.
>>>>>>>>>>>> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>>>>>>>>>>>> >> >> BUG: Define ITK_WRAPPING_PARSER when wrapping.
>>>>>>>>>>>> >> >> COMP: Do not use C++11 alignas in itkAlignedTypedef.
>>>>>>>>>>>> >> >> ENH: Bump CMakeLists.txt version to 4.8.1.
>>>>>>>>>>>> >> >> BUG: Pass the CMAKE_CXX_FLAGS to castxml.
>>>>>>>>>>>> >> >> ENH: Bump CastXML version to 2015-30-29.
>>>>>>>>>>>> >> >> ENH: Bump LLVM / Clang to 3.7.0.
>>>>>>>>>>>> >> >> COMP: Avoid itklibminc linking with
>>>>>>>>>>>> ITK_USE_SYSTEM_HDF5.
>>>>>>>>>>>> >> >> COMP: Add missing ITKIOImageBase dependency for
>>>>>>>>>>>> ITKTransformMINC.
>>>>>>>>>>>> >> >> COMP: Use itkSimpleNewMacro in
>>>>>>>>>>>> >> >> ThreadedIteratorRangePartitionerTest.
>>>>>>>>>>>> >> >> ENH: Add wrapping support for building modules
>>>>>>>>>>>> externally.
>>>>>>>>>>>> >> >> BUG: Fix KWStyle test paths when building a module
>>>>>>>>>>>> externally.
>>>>>>>>>>>> >> >> ENH: Add Cuberille Remote module.
>>>>>>>>>>>> >> >> COMP: Remove carriage returns from Cuberille remote.
>>>>>>>>>>>> >> >> COMP: Remove unused argument in
>>>>>>>>>>>> ConditionVariableNoThreads.
>>>>>>>>>>>> >> >> DOC: Correct spelling of Continuous.
>>>>>>>>>>>> >> >> ENH: Bump the MinimalPathExtraction Remote to
>>>>>>>>>>>> 2015-10-20.
>>>>>>>>>>>> >> >> COMP: Fix KernelTransform SetFixedParameters
>>>>>>>>>>>> argument type.
>>>>>>>>>>>> >> >> STYLE: Use prefix increment operator in ImageBase.
>>>>>>>>>>>> >> >> COMP: Use ITK's pygccxml by correctly setting up the
>>>>>>>>>>>> sys.path
>>>>>>>>>>>> >> >> Revert "COMP: Put vnl_export.h in the list of
>>>>>>>>>>>> sources so it gets
>>>>>>>>>>>> >> >> installed."
>>>>>>>>>>>> >> >> BUG: Revert "BUG: ConvertLabelMap with different
>>>>>>>>>>>> LabelMapTypes"
>>>>>>>>>>>> >> >> ENH: Marking wrapping CMake configuration variables
>>>>>>>>>>>> as advanced.
>>>>>>>>>>>> >> >> STYLE: Rename CASTXML to CASTXML_EXECUTABLE.
>>>>>>>>>>>> >> >> COMP: Non-virtual copy attribute members in LabelMap
>>>>>>>>>>>> cannot have
>>>>>>>>>>>> >> >> override.
>>>>>>>>>>>> >> >> COMP: Add wrapping for
>>>>>>>>>>>> AdaptiveHistogramEqualizationImageFilter.
>>>>>>>>>>>> >> >> COMP: Add itkMacro.h to itkPromoteType.h for
>>>>>>>>>>>> ITK_EXCEPT.
>>>>>>>>>>>> >> >> ENH: Remove CMake version check in
>>>>>>>>>>>> ITKModuleHeaderTest.cmake
>>>>>>>>>>>> >> >> BUG: Improve KWStyle ExternalProject utilization.
>>>>>>>>>>>> >> >> ENH: Remove old KWStyle build script.
>>>>>>>>>>>> >> >> COMP: Address VariableLengthVector Doxygen rhs
>>>>>>>>>>>> @param not found.
>>>>>>>>>>>> >> >> ENH: Rename WRAPPING_LIBRARY_GROUPS to
>>>>>>>>>>>> WRAPPING_SUBMODULE_ORDER.
>>>>>>>>>>>> >> >> ENH: Install Python bindings into site-packages.
>>>>>>>>>>>> >> >> ENH: Improve readability of Python site-packages
>>>>>>>>>>>> path detection.
>>>>>>>>>>>> >> >> COMP: DiscreteGaussianDerivativeImageFilter unsigned
>>>>>>>>>>>> expression
>>>>>>>>>>>> >> >> warning.
>>>>>>>>>>>> >> >> BUG: ITKCommon publically depends on
>>>>>>>>>>>> ITKDoubleConversion.
>>>>>>>>>>>> >> >> COMP: Improve scoping in CovariantVectorGeometryTest.
>>>>>>>>>>>> >> >> ENH: Improves names and export of module
>>>>>>>>>>>> dependencies.
>>>>>>>>>>>> >> >> STYLE: Improve namespace bracket style in
>>>>>>>>>>>> itkIsConvertible.
>>>>>>>>>>>> >> >> COMP: Set CMP0054 to new.
>>>>>>>>>>>> >> >> BUG: Remove unused wrapping files.
>>>>>>>>>>>> >> >> BUG: Do install install wrapping development files.
>>>>>>>>>>>> >> >> ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.
>>>>>>>>>>>> >> >> BUG: Remove duplicate inclusion of wrapping
>>>>>>>>>>>> submodules.
>>>>>>>>>>>> >> >> COMP: Do not use C++ style comments for Doxygen cond.
>>>>>>>>>>>> >> >> BUG: Fix detection of the gold linker.
>>>>>>>>>>>> >> >> BUG: Update Python package installation locations.
>>>>>>>>>>>> >> >> ENH: Bump CMakeLists.txt version to 4.8.2.
>>>>>>>>>>>> >> >> ENH: Change BUILD_EXAMPLES default to OFF.
>>>>>>>>>>>> >> >> BUG: Use 'from itk import ITKCommon' in
>>>>>>>>>>>> module2module test.
>>>>>>>>>>>> >> >> COMP: Link to VTK Python when built with Kits
>>>>>>>>>>>> support.
>>>>>>>>>>>> >> >> BUG: Install itk_minc2.h header.
>>>>>>>>>>>> >> >> COMP: ITKIOMINC has a public dependency on
>>>>>>>>>>>> ITKIOImageBase.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Michka Popoff (9):
>>>>>>>>>>>> >> >> ENH: Update to swig 3.0.7
>>>>>>>>>>>> >> >> ENH: Do not link against specific Python library on
>>>>>>>>>>>> OS X
>>>>>>>>>>>> >> >> COMP: Fix wrapping warnings when building with
>>>>>>>>>>>> >> >> ITK_WRAP_IMAGE_DIMS=2
>>>>>>>>>>>> >> >> COMP: Add missing wrapping for TransformBase
>>>>>>>>>>>> >> >> COMP: Use ITK's pygccxml by correctly setting up the
>>>>>>>>>>>> sys.path
>>>>>>>>>>>> >> >> COMP: Disable incompatible modules when using Python
>>>>>>>>>>>> 3 wrapping
>>>>>>>>>>>> >> >> COMP: Move MovingHistogramImageFilterBase wrapping to
>>>>>>>>>>>> >> >> ImageFilterBase
>>>>>>>>>>>> >> >> module
>>>>>>>>>>>> >> >> COMP: Disable incompatible modules when using Python
>>>>>>>>>>>> 3 wrapping
>>>>>>>>>>>> >> >> ENH: Allow operations on Indexes and Offsets in
>>>>>>>>>>>> Python
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Mikhail Isakov (1):
>>>>>>>>>>>> >> >> BUG: DiffusionTensor3DReconstruction segfault if no
>>>>>>>>>>>> baseline image
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Nick Tustison (5):
>>>>>>>>>>>> >> >> BUG: Set a default b-spline epsilon.
>>>>>>>>>>>> >> >> ENH: Adding testing for closed loop.
>>>>>>>>>>>> >> >> BUG: Updating B-spline classes with the same
>>>>>>>>>>>> epsilon strategy.
>>>>>>>>>>>> >> >> PERF: Switch vnl_vectors for fixed arrays.
>>>>>>>>>>>> >> >> ENH: Point-set registration with time-varying
>>>>>>>>>>>> B-spline.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Olivier Commowick (3):
>>>>>>>>>>>> >> >> BUG: Correct discrepancy in tridiagonal reduction
>>>>>>>>>>>> wrt VNL eigen
>>>>>>>>>>>> >> >> system
>>>>>>>>>>>> >> >> BUG: Correct under/overflows in vnl_math_hypot
>>>>>>>>>>>> (taken from pythag
>>>>>>>>>>>> >> >> from V3P)
>>>>>>>>>>>> >> >> BUG: Switch eigenvalues computation to double
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Pablo Hernandez-Cerdan (2):
>>>>>>>>>>>> >> >> ENH: Help class for itkFlatStructuringElement with
>>>>>>>>>>>> constructor
>>>>>>>>>>>> >> >> from
>>>>>>>>>>>> >> >> images.
>>>>>>>>>>>> >> >> COMP: Fix test errors and warnings in
>>>>>>>>>>>> FlatStructuringElement.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Seun Odutola (1):
>>>>>>>>>>>> >> >> COMP: Fixed name clash with Apple header (check
>>>>>>>>>>>> Macro), renamed
>>>>>>>>>>>> >> >> check
>>>>>>>>>>>> >> >> to Check
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Shawn Waldon (1):
>>>>>>>>>>>> >> >> COMP: Set target OS X version in environment for
>>>>>>>>>>>> tools using
>>>>>>>>>>>> >> >> compiler
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Simon Alexander (1):
>>>>>>>>>>>> >> >> BUG: incorrect closest point computation
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Tobias Wood (2):
>>>>>>>>>>>> >> >> BUG: LBFGSB was printing messages even with debug
>>>>>>>>>>>> switched off.
>>>>>>>>>>>> >> >> BUG: Removed an unguarded print statement.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Vladimir S. FONOV (9):
>>>>>>>>>>>> >> >> BUG: Missing ITKIOMINC_EXPORT on __Private()
>>>>>>>>>>>> >> >> COMP: Changing the order of HDF5 library components
>>>>>>>>>>>> >> >> COMP: Splitting up IOMINC module into two parts:
>>>>>>>>>>>> MINC and
>>>>>>>>>>>> >> >> Transform
>>>>>>>>>>>> >> >> STYLE: updated comments to properly reference LIBMINC
>>>>>>>>>>>> >> >> ENH: Add script to merge upstream MINC as a subtree
>>>>>>>>>>>> >> >> MINC 2015-07-23 (c033d431)
>>>>>>>>>>>> >> >> COMP: Update MINC CMake code
>>>>>>>>>>>> >> >> MINC 2015-08-18 (6d7e3ba8)
>>>>>>>>>>>> >> >> MINC 2015-09-13 (95cd5374)
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Xiaoxiao Liu (1):
>>>>>>>>>>>> >> >> DOC: update email address for xiaoxiao.
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Zach Williamson (10):
>>>>>>>>>>>> >> >> BUG: Use correct libraries for ImageFusion tests
>>>>>>>>>>>> >> >> ENH: Consolidate Library Dependencies
>>>>>>>>>>>> >> >> COMP: Add a missing link to Review module
>>>>>>>>>>>> >> >> COMP: Use correct linking macro in DCMTK
>>>>>>>>>>>> >> >> BUG: Use correct libraries for TestKernel tests
>>>>>>>>>>>> >> >> COMP: Fix inconsistant naming of
>>>>>>>>>>>> GPUPDEDeformableRegistration
>>>>>>>>>>>> >> >> ENH: Use new linking system macros
>>>>>>>>>>>> >> >> PERF: Avoid searching private dependencies for
>>>>>>>>>>>> include directories
>>>>>>>>>>>> >> >> COMP: Recover missing dependencies
>>>>>>>>>>>> >> >> ENH: use new linking macros in Filtering module
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> -----------------------------------------------------
>>>>>>>>>>>> >> >> Errors or omissions? Please fix them here:
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit
>>>>>>>>>>>> >> >> _____________________________________
>>>>>>>>>>>> >> >> Powered by www.kitware.com
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Visit other Kitware open-source projects at
>>>>>>>>>>>> >> >> http://www.kitware.com/opensource/opensource.html
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Kitware offers ITK Training Courses, for more information
>>>>>>>>>>>> visit:
>>>>>>>>>>>> >> >> http://www.kitware.com/products/protraining.php
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Please keep messages on-topic and check the ITK FAQ at:
>>>>>>>>>>>> >> >> http://www.itk.org/Wiki/ITK_FAQ
>>>>>>>>>>>> >> >>
>>>>>>>>>>>> >> >> Follow this link to subscribe/unsubscribe:
>>>>>>>>>>>> >> >> http://public.kitware.com/mailman/listinfo/insight-users
>>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> _______________________________________________
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>> Powered by www.kitware.com
>>>>>>>>>>>
>>>>>>>>>>> Visit other Kitware open-source projects at
>>>>>>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>>>>>>
>>>>>>>>>>> Kitware offers ITK Training Courses, for more information visit:
>>>>>>>>>>>
>>>>>>>>>> http://kitware.com/products/protraining.php
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>>>>>>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>>>>>>>>
>>>>>>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>>>>>>>
>>>>>>>>>> http://public.kitware.com/mailman/listinfo/insight-developers
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>
>>>>>>
>>>>
>>>
>
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