[ITK-users] [ITK-dev] [ANN] ITK 4.9 Release Candidate 1 is ready for testing!
Dženan Zukić
dzenanz at gmail.com
Tue Dec 1 09:21:50 EST 2015
If you are running tests in debug, some of them are too slow and time out.
On Tue, Dec 1, 2015 at 9:19 AM, Simon Alexander <skalexander at gmail.com>
wrote:
> Hi Matt,
>
> So I pulled origin/master and rebuilt last night. I have different
> failures now, all by timeout:
>
> *Total Test time (real) = 6363.39 sec*
>
> *The following tests FAILED:*
> * 726 - itkFastMarchingImageFilterTest_wm_multipleSeeds_NoTopo
> (Timeout)*
> * 727 - itkFastMarchingImageFilterTest_wm_multipleSeeds_StrictTopo
> (Timeout)*
> * 728 -
> itkFastMarchingImageFilterTest_wm_multipleSeeds_NoHandlesTopo (Timeout)*
> * 2025 - itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest
> (Timeout)*
> *Errors while running CTest*
>
>
> Any thoughts on what's going on there?
>
>
> On Mon, 30 Nov 2015 at 20:42 Matt McCormick <matt.mccormick at kitware.com>
> wrote:
>
>> Hi Simon,
>>
>> I am returning from holiday, and also catching up on activity.
>>
>>
>> Hyun Jae has taken care of the KWStyle warnings and the data conversion
>> warning:
>>
>> http://review.source.kitware.com/#/c/20430/
>> http://review.source.kitware.com/#/c/20446/
>>
>>
>> And Dzenan and Bill have addressed Wiki examples errors:
>>
>> https://github.com/InsightSoftwareConsortium/ITKWikiExamples/pull/3
>>
>>
>> It is likely that the test failures on your build still remain. Did you
>> want to take them on?
>>
>> Thanks,
>> Matt
>>
>> On Mon, Nov 30, 2015 at 2:00 PM, Dženan Zukić <dzenanz at gmail.com> wrote:
>>
>>> Looking at the master branch is the right thing to do. I am not doing
>>> any active development regarding this right now.
>>>
>>> On Mon, Nov 30, 2015 at 1:53 PM, Simon Alexander <skalexander at gmail.com>
>>> wrote:
>>>
>>>> Hi All,
>>>>
>>>> I had hoped to be able to look at this over the weekend, but no such
>>>> luck. Is there somewhere useful I can help with it now? Not sure what
>>>> state we are in (or what branch).
>>>>
>>>> On Wed, 25 Nov 2015 at 16:41 Dženan Zukić <dzenanz at gmail.com> wrote:
>>>>
>>>>> It turns out that all the compile errors were occurring in
>>>>> WikiExamples. I solved all except one:
>>>>> ITK_FIXED_PARAMETERS_ARE_DOUBLE is not defined in
>>>>> file ITK\Modules\Remote\WikiExamples\Utilities\FileOutputWindow.cxx line
>>>>> 23, but it should be judging from the comment on that line.
>>>>>
>>>>> For the rest, I created a pull request:
>>>>> https://github.com/InsightSoftwareConsortium/ITKWikiExamples/pull/3
>>>>>
>>>>> On Wed, Nov 25, 2015 at 4:08 PM, Simon Alexander <
>>>>> skalexander at gmail.com> wrote:
>>>>>
>>>>>> Perfect. I'm under a deadline that is likely to eat the rest of the
>>>>>> week but if that clears up I'll try and jump in earlier.
>>>>>>
>>>>>> On Wed, 25 Nov 2015 at 16:06 Dženan Zukić <dzenanz at gmail.com> wrote:
>>>>>>
>>>>>>> OK I will work on it for an hour or two now, and I will make a
>>>>>>> branch and push it to Gerrit so whoever wants can pick up from there and
>>>>>>> keep updating it.
>>>>>>>
>>>>>>> On Wed, Nov 25, 2015 at 4:02 PM, Simon Alexander <
>>>>>>> skalexander at gmail.com> wrote:
>>>>>>>
>>>>>>>> Makes sense. At this point I am unlikely to have time to look at
>>>>>>>> this until Saturday, but have hopes for a few free hours there.
>>>>>>>>
>>>>>>>> On Wed, 25 Nov 2015 at 15:58 Dženan Zukić <dzenanz at gmail.com>
>>>>>>>> wrote:
>>>>>>>>
>>>>>>>>> Building git master from Nov 23rd with examples and testing
>>>>>>>>> enabled I get 14 compile errors in VS2015 debug x64. Should we coordinate
>>>>>>>>> our efforts in fixing them?
>>>>>>>>>
>>>>>>>>> On Wed, Nov 25, 2015 at 11:29 AM, Simon Alexander <
>>>>>>>>> skalexander at gmail.com> wrote:
>>>>>>>>>
>>>>>>>>>> Two of the three failures look like truncation issues (like
>>>>>>>>>> https://open.cdash.org/testDetails.php?test=395263772&build=4117158
>>>>>>>>>> )
>>>>>>>>>>
>>>>>>>>>> The other (
>>>>>>>>>> https://open.cdash.org/testDetails.php?test=395264938&build=4117158)
>>>>>>>>>> is less obvious.
>>>>>>>>>>
>>>>>>>>>> If I have time this evening I'll try and have a look at these.
>>>>>>>>>>
>>>>>>>>>> Is your standard test build in 32 bit ? That might explain the
>>>>>>>>>> difference if there are some underlying type assumptions, but not obvious
>>>>>>>>>> why 2015 would trigger but not 2013.
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> On Wed, 25 Nov 2015 at 11:01 Matt McCormick <
>>>>>>>>>> matt.mccormick at kitware.com> wrote:
>>>>>>>>>>
>>>>>>>>>>> Ah, cool! Here:
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> https://open.cdash.org/viewBuildError.php?type=1&buildid=4117158
>>>>>>>>>>>
>>>>>>>>>>> Could you please look into the test failures?
>>>>>>>>>>>
>>>>>>>>>>> @Hyun Jae, could you please look into the KWStyle warnings?
>>>>>>>>>>>
>>>>>>>>>>> Thanks,
>>>>>>>>>>> Matt
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> On Wed, Nov 25, 2015 at 10:55 AM, Simon Alexander <
>>>>>>>>>>> skalexander at gmail.com> wrote:
>>>>>>>>>>> > Sorry, if I wasn't clear - I submitted two builds yesterday
>>>>>>>>>>> from SIMON-LAP,
>>>>>>>>>>> > (actually 3 as I wasn't sure the config was right on the first
>>>>>>>>>>> one). VS2013
>>>>>>>>>>> > was green, three failures on VS2015 (and 18 warnings). Looks
>>>>>>>>>>> like a
>>>>>>>>>>> > truncation problem on the resuts.
>>>>>>>>>>> >
>>>>>>>>>>> > On Wed, 25 Nov 2015 at 10:51 Matt McCormick <
>>>>>>>>>>> matt.mccormick at kitware.com>
>>>>>>>>>>> > wrote:
>>>>>>>>>>> >>
>>>>>>>>>>> >> Hi Simon,
>>>>>>>>>>> >>
>>>>>>>>>>> >> Thanks for testing.
>>>>>>>>>>> >>
>>>>>>>>>>> >> We have a Visual Studio 2015 build on the dashboard that is
>>>>>>>>>>> green:
>>>>>>>>>>> >>
>>>>>>>>>>> >> https://open.cdash.org/buildSummary.php?buildid=4117955
>>>>>>>>>>> >>
>>>>>>>>>>> >> Are there any different flags? Could you please submit an
>>>>>>>>>>> Experimental
>>>>>>>>>>> >> build?
>>>>>>>>>>> >>
>>>>>>>>>>> >> ctest -j 4 -M Experimental -T Configure -T Build -T Test
>>>>>>>>>>> -T Submit -C
>>>>>>>>>>> >> Release
>>>>>>>>>>> >>
>>>>>>>>>>> >> from a fresh build tree.
>>>>>>>>>>> >>
>>>>>>>>>>> >> Thanks,
>>>>>>>>>>> >> Matt
>>>>>>>>>>> >>
>>>>>>>>>>> >> On Wed, Nov 25, 2015 at 9:07 AM, Simon Alexander <
>>>>>>>>>>> skalexander at gmail.com>
>>>>>>>>>>> >> wrote:
>>>>>>>>>>> >> > Looks like a few problems with x64 build on visual studio
>>>>>>>>>>> 2015 - do you
>>>>>>>>>>> >> > have
>>>>>>>>>>> >> > a test machine in this configuration?
>>>>>>>>>>> >> >
>>>>>>>>>>> >> > On Mon, 23 Nov 2015 at 17:53 Matt McCormick <
>>>>>>>>>>> matt.mccormick at kitware.com>
>>>>>>>>>>> >> > wrote:
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> On behalf of the Insight Toolkit community, we are proud
>>>>>>>>>>> to announce
>>>>>>>>>>> >> >> that
>>>>>>>>>>> >> >> ITK 4.9 release candidate 1 has been tagged and is
>>>>>>>>>>> available for
>>>>>>>>>>> >> >> testing!
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Please take this opportunity to test the new features in
>>>>>>>>>>> the release
>>>>>>>>>>> >> >> candidate.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> To obtain the source code,
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> git clone http://itk.org/ITK.git
>>>>>>>>>>> >> >> cd ITK
>>>>>>>>>>> >> >> git checkout -q --detach v4.9rc01
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> For more details, please see the Git documentation [1].
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> A few selected highlights for this release:
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * New Remote modules: the Cuberille module for smooth
>>>>>>>>>>> generation of
>>>>>>>>>>> >> >> meshes
>>>>>>>>>>> >> >> from binary segmentation images, and the
>>>>>>>>>>> AnisotropicDiffusionLBR module
>>>>>>>>>>> >> >> improved edge-preserving smoothing.
>>>>>>>>>>> >> >> * Build your own ITK module outside the source tree, add
>>>>>>>>>>> continuous
>>>>>>>>>>> >> >> integration testing on GitHub, and easily add Python
>>>>>>>>>>> wrapping for your
>>>>>>>>>>> >> >> C++
>>>>>>>>>>> >> >> algorithms.
>>>>>>>>>>> >> >> * Python wrapping, including Python 3, builds faster with
>>>>>>>>>>> a more
>>>>>>>>>>> >> >> standard
>>>>>>>>>>> >> >> installation
>>>>>>>>>>> >> >> * Improved performance of itk::Image::GetPixel and
>>>>>>>>>>> operations on
>>>>>>>>>>> >> >> itk::VariableLengthVector’s
>>>>>>>>>>> >> >> * Generate a FlatStructuringElement from an image
>>>>>>>>>>> >> >> * Point-set registration with time-varying B-splines
>>>>>>>>>>> >> >> * Module dependencies can now be specified as public /
>>>>>>>>>>> private /
>>>>>>>>>>> >> >> compile /
>>>>>>>>>>> >> >> test
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Please test the release candidate and share your
>>>>>>>>>>> experiences on the
>>>>>>>>>>> >> >> mailing list, issue tracker, and Gerrit Code Review. The
>>>>>>>>>>> new module
>>>>>>>>>>> >> >> dependency specification mechanism may unearth missing
>>>>>>>>>>> dependencies for
>>>>>>>>>>> >> >> projects that use ITK COMPONENTS with the CMake
>>>>>>>>>>> find_package command.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> An Experimental build, which demonstrates how the test
>>>>>>>>>>> suite performs
>>>>>>>>>>> >> >> on
>>>>>>>>>>> >> >> your local build system, can be submitted to the dashboard
>>>>>>>>>>> [2] with:
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> mkdir ../ITK-build
>>>>>>>>>>> >> >> cd ../ITK-build
>>>>>>>>>>> >> >> cmake ../ITK
>>>>>>>>>>> >> >> ctest -j 4 -M Experimental -T Configure -T Build -T
>>>>>>>>>>> Test -T Submit
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Visual Studio builds must also add “-C Release” to the
>>>>>>>>>>> ctest command.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Notify the mailing list if there are any unexpected
>>>>>>>>>>> failures. Testing
>>>>>>>>>>> >> >> your own applications against the RC is also appreciated.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Congratulations and well done to the 35 contributors to
>>>>>>>>>>> this release.
>>>>>>>>>>> >> >> We
>>>>>>>>>>> >> >> would especially like to recognize the new contributors:
>>>>>>>>>>> Mikhail
>>>>>>>>>>> >> >> Isakov,
>>>>>>>>>>> >> >> Betsy McPhail, Alexander Leinoff, Shawn Waldon, Tobias
>>>>>>>>>>> Wood, Seun
>>>>>>>>>>> >> >> Odutola,
>>>>>>>>>>> >> >> Hyun Jae Kang, Lucas Gandel, Adam Snyder, Junjie Bai, Pablo
>>>>>>>>>>> >> >> Hernandez-Cerdan, Abhishek Tiwari, Eugene Prilepin, Zach
>>>>>>>>>>> Williamson,
>>>>>>>>>>> >> >> Luc
>>>>>>>>>>> >> >> Hermitte, Laurentiu Nicola, and Floris Berendsen.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> The final release is scheduled for mid-December.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> [1] http://www.itk.org/Wiki/ITK/Git
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> [2] http://open.cdash.org/index.php?project=Insight
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> New Features
>>>>>>>>>>> >> >> ---------------------
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Wrapping improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Python 3 supported
>>>>>>>>>>> >> >> * Wrapping builds much faster due to CastXML binaries
>>>>>>>>>>> >> >> * LandmarkBasedTransformInitializer now wrapped
>>>>>>>>>>> >> >> * NumPy bridge with VisualStudio
>>>>>>>>>>> >> >> * Wrapping for the MinimalPathExtraction module
>>>>>>>>>>> >> >> * Wrapping is now installed into Python’s site-packages
>>>>>>>>>>> directory in
>>>>>>>>>>> >> >> the
>>>>>>>>>>> >> >> “itk” package
>>>>>>>>>>> >> >> * Wrapping package size is decreased
>>>>>>>>>>> >> >> * Better package portability on Mac OSX
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> New Remote Modules
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Cuberille
>>>>>>>>>>> >> >> * Insight Journal Article:
>>>>>>>>>>> http://hdl.handle.net/10380/3186
>>>>>>>>>>> >> >> * AnisotropicDiffusionLBR
>>>>>>>>>>> >> >> * Insight Journal Article:
>>>>>>>>>>> http://hdl.handle.net/10380/3505
>>>>>>>>>>> >> >> * Web browser reproducibility:
>>>>>>>>>>> >> >> http://www.kitware.com/blog/home/post/942
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Core Improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * External Modules can now be developed outside of the ITK
>>>>>>>>>>> source tree
>>>>>>>>>>> >> >> and
>>>>>>>>>>> >> >> on GitHub
>>>>>>>>>>> >> >> * Details: http://www.kitware.com/blog/home/post/997
>>>>>>>>>>> >> >> * New utilities in itk::Math:
>>>>>>>>>>> >> >> * AlmostEquals
>>>>>>>>>>> >> >> * NotAlmostEquals
>>>>>>>>>>> >> >> * ExactlyEquals
>>>>>>>>>>> >> >> * NotExactlyEquals
>>>>>>>>>>> >> >> * New itk::NumericTraits
>>>>>>>>>>> >> >> * IsInteger
>>>>>>>>>>> >> >> * IsSigned
>>>>>>>>>>> >> >> * Improved C++11 support
>>>>>>>>>>> >> >> * New ITK_DELETE_FUNCTION macro for “=delete”
>>>>>>>>>>> >> >> * New ITK_NOEXCEPT macro for the “noexcept” keyword
>>>>>>>>>>> >> >> * Improved capabilities of itk::ResourceProbe and
>>>>>>>>>>> >> >> itk::ResourceProbesCollectorBase
>>>>>>>>>>> >> >> * Improve numerical stability in VNL eigen system
>>>>>>>>>>> estimation
>>>>>>>>>>> >> >> * itksys_ios:: and itksys_stl:: have been remove (use
>>>>>>>>>>> std::)
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Filtering Improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Generate a FlatStructuringElement from an image
>>>>>>>>>>> >> >> * WarpImageFilter support VectorImage’s
>>>>>>>>>>> >> >> * ConvertLabelMap supports different LabelMap types
>>>>>>>>>>> >> >> * ImageToPathFilter moved from the ITKReview to the
>>>>>>>>>>> ITKPath module
>>>>>>>>>>> >> >> * itk::MovingHistogramImageFilter moved to the
>>>>>>>>>>> ITKImageFilterBase
>>>>>>>>>>> >> >> module
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Registration Improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Point-set registration with time-varying B-splines
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Build Improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Module dependencies can now be specified as public /
>>>>>>>>>>> private /
>>>>>>>>>>> >> >> compile /
>>>>>>>>>>> >> >> test
>>>>>>>>>>> >> >> * BUILD_EXAMPLES CMake option is now OFF by default
>>>>>>>>>>> >> >> * Option to export all library symbols on Windows:
>>>>>>>>>>> >> >> * Details: http://www.kitware.com/blog/home/post/939
>>>>>>>>>>> >> >> * Expat third party library is now name mangled
>>>>>>>>>>> >> >> * Many more modules can be built as shared libraries
>>>>>>>>>>> >> >> * KWStyle is automatically built and configured when tests
>>>>>>>>>>> are built
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Performance Improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * New MetaProgrammingLibrary namespace (itk::mpl) holds
>>>>>>>>>>> members for
>>>>>>>>>>> >> >> metaprogramming
>>>>>>>>>>> >> >> * itk::mpl::{TrueType,FalseType}
>>>>>>>>>>> >> >> * itk::mpl::{If,Not,And,Or,Xor}
>>>>>>>>>>> >> >> * itk::mpl::EnableIf
>>>>>>>>>>> >> >> * itk::mpl::IsBaseOf
>>>>>>>>>>> >> >> * itk::mpl::IsConvertible
>>>>>>>>>>> >> >> * itk::mpl::IsNumber
>>>>>>>>>>> >> >> * itk::mpl::IsSame
>>>>>>>>>>> >> >> * itk::mpl::PromoteType
>>>>>>>>>>> >> >> * Image::GetPixel performance improvements
>>>>>>>>>>> >> >> * Many itk::VariableLengthVector performance improvements
>>>>>>>>>>> >> >> * AdaptiveHistogramEqualization uses a moving histogram
>>>>>>>>>>> >> >> * WarpImageFilter performance improvements
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Documentation Improvements
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Updates to the Software Guide, Doxygen, Wiki and Sphinx
>>>>>>>>>>> Examples
>>>>>>>>>>> >> >> * ITK Software Guide improvements
>>>>>>>>>>> >> >> * How to use Python wrapping
>>>>>>>>>>> >> >> * How to create an ITK module
>>>>>>>>>>> >> >> * Improvements to segmentation examples
>>>>>>>>>>> >> >> * Expanded Canny edge detection example
>>>>>>>>>>> >> >> * Expanded tree container example
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Third Party Library Updates
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * FFTW updated to latest upstream
>>>>>>>>>>> >> >> * Build with recent OpenCV 2 and 3
>>>>>>>>>>> >> >> * Build with the latest VTK
>>>>>>>>>>> >> >> * PNG update to the latest upstream
>>>>>>>>>>> >> >> * GDCM updated to the latest upstream
>>>>>>>>>>> >> >> * KWSys updated to the latest upstream
>>>>>>>>>>> >> >> * MINC updated to the latest upstream
>>>>>>>>>>> >> >> * SWIG updated to the latest upstream
>>>>>>>>>>> >> >> * Third party PNG and MINC are now Git subtrees
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Style improvements -- ITK gets more stylish with every
>>>>>>>>>>> release!
>>>>>>>>>>> >> >>
>>>>>>>>>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * Private copy constructors and operator= use
>>>>>>>>>>> ITK_DELETE_FUNCTION
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Improved code coverage -- we are at 84.9%!
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * *Lots* of important bug fixes
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> * And much more! See details in the log below.
>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Changes from v4.8.0..v4.9rc01
>>>>>>>>>>> >> >> --------------------------------------------
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Abhishek Tiwari (1):
>>>>>>>>>>> >> >> BUG: "tmpImageIndex" not initialized to 0.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Adam Snyder (1):
>>>>>>>>>>> >> >> PERF: Reworked MMI Threading using a per-thread buffer
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Alexander Leinoff (6):
>>>>>>>>>>> >> >> ENH: Adds IsInteger and IsSigned to NumericTraits.
>>>>>>>>>>> >> >> COMP: Doxygen itkMath.h 'OneValue()' could not be
>>>>>>>>>>> resolved.
>>>>>>>>>>> >> >> ENH: Adds ExactlyEquals and NotExactlyEquals
>>>>>>>>>>> functions to
>>>>>>>>>>> >> >> itkMath.h
>>>>>>>>>>> >> >> COMP: Removes floating-point equality checks
>>>>>>>>>>> >> >> ENH: COMP: Adds support for complex values to
>>>>>>>>>>> Math::AlmostEquals
>>>>>>>>>>> >> >> ENH: Updates fftw dependency
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Arnaud Gelas (5):
>>>>>>>>>>> >> >> COMP: fix warning (unused local typedef)
>>>>>>>>>>> >> >> COMP: simplify ITKVideoBridgeOpenCV dependency
>>>>>>>>>>> >> >> DOC: add doxgen documentation for
>>>>>>>>>>> >> >> BinaryImageToLevelSetImageAdaptor
>>>>>>>>>>> >> >> ENH: add tests to exercise
>>>>>>>>>>> itk::ThreadedIteratorRangePartitioner
>>>>>>>>>>> >> >> COMP: fix compilation error with OpenCV2 and OpenCV3
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Betsy McPhail (1):
>>>>>>>>>>> >> >> BUG: Improve buffer alignment in OctreeNode .
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Bill Hoffman (2):
>>>>>>>>>>> >> >> ENH: Use new CMake Windows export symbol dll feature.
>>>>>>>>>>> >> >> COMP: Put vnl_export.h in the list of sources so it
>>>>>>>>>>> gets
>>>>>>>>>>> >> >> installed.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Bill Lorensen (4):
>>>>>>>>>>> >> >> COMP: VTkGlue linker errors
>>>>>>>>>>> >> >> BUG: Inappropriate use of AlmostEquals
>>>>>>>>>>> >> >> ENH: Bump tag for wiki examples
>>>>>>>>>>> >> >> ENH: Better layout strategy
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Brad King (3):
>>>>>>>>>>> >> >> ENH: Remove use of include <itksys/ios/*> and
>>>>>>>>>>> itksys_ios::*
>>>>>>>>>>> >> >> ENH: Remove use of include <itksys/stl/*> and
>>>>>>>>>>> itksys_stl::*
>>>>>>>>>>> >> >> ENH: Update CMake Policy settings in
>>>>>>>>>>> Testing/TestExternal project
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Bradley Lowekamp (31):
>>>>>>>>>>> >> >> BUG: Avoid null deference in PrintSelf with default
>>>>>>>>>>> construction
>>>>>>>>>>> >> >> ENH: Enable base classes for templates of landmark
>>>>>>>>>>> initializer
>>>>>>>>>>> >> >> STYLE: Use "Swap" for ITK member name
>>>>>>>>>>> >> >> BUG: Demonstrate Eigen analysis failure
>>>>>>>>>>> >> >> BUG: Fix computation of Eigen analysis
>>>>>>>>>>> >> >> ENH: Update DiscreteHessianGaussian Test baseline
>>>>>>>>>>> >> >> ENH: Correctly demonstrate float point Eigen failure
>>>>>>>>>>> >> >> ENH: compile vnl_math_hypot, and use at least double
>>>>>>>>>>> >> >> ENH: Adding initial update script from used libpng
>>>>>>>>>>> version.
>>>>>>>>>>> >> >> ENH: removing non-subtree files for itkpng
>>>>>>>>>>> >> >> ENH: Ported ITK changes for building to subtree
>>>>>>>>>>> merged code
>>>>>>>>>>> >> >> ENH: Update libpng update script for v1.6.9
>>>>>>>>>>> >> >> BUG: Use ParameterValueType for computation of
>>>>>>>>>>> landmark affine
>>>>>>>>>>> >> >> ENH: Wrap LandmarkBasedTransformInitializer
>>>>>>>>>>> >> >> BUG: Avoid potential exception in
>>>>>>>>>>> itk::Object::UnRegister
>>>>>>>>>>> >> >> ENH: Update itkpng zlib, configuration, and rename
>>>>>>>>>>> >> >> ENH: Update itkpng name mangling
>>>>>>>>>>> >> >> BUG: Use const pointer in Set method for constant
>>>>>>>>>>> ReferenceImage
>>>>>>>>>>> >> >> ivar
>>>>>>>>>>> >> >> BUG: Increase tolerance for
>>>>>>>>>>> PhysicsBasedNonRigidRegistrationMethod
>>>>>>>>>>> >> >> BUG: Demonstrate side effect on registration due to
>>>>>>>>>>> BSplineScatter
>>>>>>>>>>> >> >> change
>>>>>>>>>>> >> >> ENH: Move MovingHistogramImageFilter base classes to
>>>>>>>>>>> >> >> ImageFilterBase
>>>>>>>>>>> >> >> BUG: Avoid potential exception in
>>>>>>>>>>> itk::Object::UnRegister
>>>>>>>>>>> >> >> BUG: Avoid null deference in PrintSelf with default
>>>>>>>>>>> construction
>>>>>>>>>>> >> >> BUG: Use const pointer in Set method for constant
>>>>>>>>>>> ReferenceImage
>>>>>>>>>>> >> >> ivar
>>>>>>>>>>> >> >> ENH: Optimize AdaptiveHistogramEqualization with
>>>>>>>>>>> MovingHistogram
>>>>>>>>>>> >> >> base
>>>>>>>>>>> >> >> COMP: address sign unsigned comparison warning
>>>>>>>>>>> >> >> COMP: Address signed unsigned comparison warning
>>>>>>>>>>> >> >> COMP: Address unused member variable and methods in
>>>>>>>>>>> anonymous ns
>>>>>>>>>>> >> >> BUG: Fix segfault when with empty IsolatedWatershed
>>>>>>>>>>> Threshold
>>>>>>>>>>> >> >> range
>>>>>>>>>>> >> >> BUG: Adjust intensity tolerance for
>>>>>>>>>>> PhysicsBasedNonRigid test
>>>>>>>>>>> >> >> BUG: Reduce number of targets with MSVC
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Davis Vigneault (7):
>>>>>>>>>>> >> >> DOC: Minor improvements to segmentation examples.
>>>>>>>>>>> >> >> DOC: Expanded Canny Edge Detection Example
>>>>>>>>>>> >> >> DOC: Expanded TreeContainer Example
>>>>>>>>>>> >> >> COMP: Warnings in itkVTKImageExport when compiling
>>>>>>>>>>> with c++11
>>>>>>>>>>> >> >> COMP: Warnings in FFTW Classes when compiling with
>>>>>>>>>>> c++11
>>>>>>>>>>> >> >> COMP: Update Git Tag for Subdivision Module
>>>>>>>>>>> >> >> COMP: Warnings in FFTW Classes when compiling with
>>>>>>>>>>> c++11
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Dženan Zukić (1):
>>>>>>>>>>> >> >> STYLE: better formatting of the "usage" message
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Eugene Prilepin (1):
>>>>>>>>>>> >> >> BUG: Fix a template name formation in python wrappings
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Floris Berendsen (1):
>>>>>>>>>>> >> >> STYLE: Improve naming conventions in comments.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Hans Johnson (29):
>>>>>>>>>>> >> >> STYLE: Instrument for FixedParameters typedef
>>>>>>>>>>> >> >> BUG: Demonstrate DisplacementTransformFailure
>>>>>>>>>>> >> >> BUG: FixedParameters should be double precision
>>>>>>>>>>> >> >> STYLE: Minor code style issues for MGHIO
>>>>>>>>>>> >> >> COMP: Update to version for WikiExamples
>>>>>>>>>>> >> >> ENH: Update Sphinx for ITK 4.8.0
>>>>>>>>>>> >> >> ENH: Update MGHIO to be shared lib
>>>>>>>>>>> >> >> ENH: Provide consistent floating point comparisons
>>>>>>>>>>> >> >> BUG: Fix MGHIO to fix write failures
>>>>>>>>>>> >> >> PERF: Remove floating point as sentinal value
>>>>>>>>>>> >> >> COMP: Const correctness needs to be maintained
>>>>>>>>>>> >> >> BUG: Preserve backwards compatibility
>>>>>>>>>>> >> >> DOC: Provide consistent naming in comments
>>>>>>>>>>> >> >> ENH: Conversion between transform type tolerance
>>>>>>>>>>> >> >> STYLE: Prefer initialization to assignment
>>>>>>>>>>> >> >> ENH: Missing ITK_OVERRIDE
>>>>>>>>>>> >> >> COMP: Need to propagate ITKGDCM
>>>>>>>>>>> >> >> COMP: Need to propagate ITKGDCM
>>>>>>>>>>> >> >> COMP: Add missing ITK_OVERRIDE
>>>>>>>>>>> >> >> STYLE: Minor code style issues for MGHIO
>>>>>>>>>>> >> >> COMP: Update to version for WikiExamples
>>>>>>>>>>> >> >> ENH: Update Sphinx for ITK 4.8.0
>>>>>>>>>>> >> >> ENH: Update MGHIO to be shared lib
>>>>>>>>>>> >> >> BUG: Fix MGHIO to fix write failures
>>>>>>>>>>> >> >> ENH: C++11 allows for rigorous =delete
>>>>>>>>>>> >> >> COMP: Remove unnecessary failing assert test
>>>>>>>>>>> >> >> ENH: Ignore internal files for the Clion editor
>>>>>>>>>>> >> >> COMP: Fix VNL compilation for wider C++11 support
>>>>>>>>>>> >> >> BUG: In configuration test need to mirror code
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Hyun Jae Kang (27):
>>>>>>>>>>> >> >> BUG: Remove std::cout calls from class
>>>>>>>>>>> >> >> BUG: Avoid an unexpected output of static_cast
>>>>>>>>>>> >> >> BUG: Update python example codes for ImageRegistration
>>>>>>>>>>> >> >> BUG: Retrieve the missed wrap file
>>>>>>>>>>> >> >> BUG: itkVTKImageIO class does not handle blank lines
>>>>>>>>>>> in VTK file
>>>>>>>>>>> >> >> header.
>>>>>>>>>>> >> >> BUG: Fix HDF5 CMake configuration with VS2015
>>>>>>>>>>> >> >> BUG: Fix a compilation issue on ITK4 with FFTW and
>>>>>>>>>>> shared
>>>>>>>>>>> >> >> libraries
>>>>>>>>>>> >> >> BUG: Fixed older XCode linking error
>>>>>>>>>>> >> >> ENH: Use CastXML binaries when building with x86_64
>>>>>>>>>>> Mac OS X
>>>>>>>>>>> >> >> BUG: Remove std::cout calls from class
>>>>>>>>>>> >> >> BUG: itkVTKImageIO class does not handle blank lines
>>>>>>>>>>> in VTK file
>>>>>>>>>>> >> >> header.
>>>>>>>>>>> >> >> BUG: Fixed older XCode linking error
>>>>>>>>>>> >> >> ENH: Add automatic KWStyle build and configuration
>>>>>>>>>>> setup
>>>>>>>>>>> >> >> COMP: KWStyle shadow, format-nonliteral and
>>>>>>>>>>> autological-compare
>>>>>>>>>>> >> >> warning.
>>>>>>>>>>> >> >> COMP: Fixed the warning messages from itkGPU Module
>>>>>>>>>>> >> >> COMP: Fixed a warning message of unused-private-field
>>>>>>>>>>> >> >> COMP: Apply latest version of KWStyle
>>>>>>>>>>> >> >> COMP: Update KWStyle to fix its additional warning
>>>>>>>>>>> messages
>>>>>>>>>>> >> >> COMP: Update KWStyle to fix its additional warning
>>>>>>>>>>> messages
>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages on Windows
>>>>>>>>>>> >> >> ENH: Update itkResourceProbe to calculate statistical
>>>>>>>>>>> data
>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages on VS14
>>>>>>>>>>> >> >> COMP: Fixed 'std::sqrt' : ambiguous call to
>>>>>>>>>>> overloaded function
>>>>>>>>>>> >> >> ENH: Update the Report() function of
>>>>>>>>>>> >> >> itkResourceProbesCollectorBase
>>>>>>>>>>> >> >> COMP: Fix data-conversion warning message on
>>>>>>>>>>> itkResourceProbe
>>>>>>>>>>> >> >> COMP: Fix additional warning messages of KWStyle
>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Jon Haitz Legarreta (6):
>>>>>>>>>>> >> >> ENH: Add test for itkStatisticsUniqueLabelMapFilter
>>>>>>>>>>> >> >> BUG: Fix compilation issues for
>>>>>>>>>>> StatisticsUniqueLabelMapFilterTest
>>>>>>>>>>> >> >> BUG: Fix comparison issues for
>>>>>>>>>>> itkStatisticsUniqueLabelMapFilter
>>>>>>>>>>> >> >> BUG: Test for StatisticsUniqueLabelMapFilter stability
>>>>>>>>>>> >> >> ENH: Add test for
>>>>>>>>>>> itkParametricStpaceToImageSpaceFilter
>>>>>>>>>>> >> >> ENH: Improve code coverage for
>>>>>>>>>>> >> >> itkParametricSpaceToImageSpaceMeshFilter
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Julien Michel (1):
>>>>>>>>>>> >> >> ENH: Support of VectorImage as template parameters for
>>>>>>>>>>> >> >> WarpImageFilter
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Junjie Bai (2):
>>>>>>>>>>> >> >> BUG: ConvertLabelMap with different LabelMapTypes
>>>>>>>>>>> >> >> BUG: LabelObject CopyAttribute support different
>>>>>>>>>>> LabelObject type
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> KWSys Robot (4):
>>>>>>>>>>> >> >> KWSys 2015-07-10 (c9336bcf)
>>>>>>>>>>> >> >> KWSys 2015-07-30 (f63febb7)
>>>>>>>>>>> >> >> KWSys 2015-08-24 (cdaf522c)
>>>>>>>>>>> >> >> KWSys 2015-08-28 (dc3fdd7f)
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> LIBPNG Upstream (2):
>>>>>>>>>>> >> >> PNG 2009-04-06 (e68f5a36)
>>>>>>>>>>> >> >> PNG 2014-02-05 (3e753eb8)
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Laurentiu Nicola (2):
>>>>>>>>>>> >> >> PERF: Avoid temporary smartptr in
>>>>>>>>>>> ProcessObject::GetInput
>>>>>>>>>>> >> >> PERF: Optimize WarpImageFilter by avoiding refcount
>>>>>>>>>>> bouncing
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Luc Hermitte (8):
>>>>>>>>>>> >> >> PERF: itk::Image::GetPixel() performance improvment.
>>>>>>>>>>> >> >> PERF: Performance enhancements on
>>>>>>>>>>> VariableLengthVectors 1/...
>>>>>>>>>>> >> >> ENH: Dependencies on itkVariableLengthVector.h reduced
>>>>>>>>>>> >> >> BUG: Error in VariableLengthVector Unit Tests
>>>>>>>>>>> >> >> PERF: Performance enhancements on VLV 2/...
>>>>>>>>>>> >> >> PERF: Performances enhancements on VLV 3/...
>>>>>>>>>>> >> >> COMP: Fix signed/unsigned warnings
>>>>>>>>>>> >> >> BUG: std::copy/fill on empty VLV
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Lucas Gandel (4):
>>>>>>>>>>> >> >> ENH: Move ImageToPathFilter from ITKReview to ITKPath
>>>>>>>>>>> module.
>>>>>>>>>>> >> >> BUG: Fixing ImageToPathFilter wrapping call from
>>>>>>>>>>> Review Module
>>>>>>>>>>> >> >> STYLE: Fix KWStyle dashboard errors
>>>>>>>>>>> >> >> BUG: Fix external module BUILD_SHARED_LIBS status
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Mathieu Malaterre (1):
>>>>>>>>>>> >> >> BUG: Name mangle the included expat third party
>>>>>>>>>>> library.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Matthew McCormick (94):
>>>>>>>>>>> >> >> ENH: Change itkSystemInformationTest to
>>>>>>>>>>> itkCMakeConfigurationTest.
>>>>>>>>>>> >> >> ENH: Add AnisotropicDiffusionLBR Remote Module.
>>>>>>>>>>> >> >> ENH: Bump ITK version to 4.9.0.
>>>>>>>>>>> >> >> BUG: Remove std::cout calls from classes.
>>>>>>>>>>> >> >> COMP: Remove unused argument in
>>>>>>>>>>> ConditionVariableNoThreads.
>>>>>>>>>>> >> >> BUG: Implement UpdateLargestPossibleRegion for
>>>>>>>>>>> >> >> ImageToVTKImageFilter.
>>>>>>>>>>> >> >> COMP: Add link interface specification for wrapping
>>>>>>>>>>> >> >> target_link_libraries.
>>>>>>>>>>> >> >> STYLE: Fix indentation in
>>>>>>>>>>> itkMINCTransformIOFactory.cxx.
>>>>>>>>>>> >> >> COMP: Fix MINCTransformIO factory registration.
>>>>>>>>>>> >> >> COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with
>>>>>>>>>>> Emscripten-1.
>>>>>>>>>>> >> >> COMP: Remove unknown doxygen command in
>>>>>>>>>>> AnisotropicDiffusionLBR.
>>>>>>>>>>> >> >> BUG: Initialize mutex for 32 bit AtomicInt.
>>>>>>>>>>> >> >> ENH: Use CastXML binaries when building with x86_64
>>>>>>>>>>> Linux.
>>>>>>>>>>> >> >> STYLE: Rename gccxml -> castxml in
>>>>>>>>>>> {idx,igenerator}.py.
>>>>>>>>>>> >> >> COMP: Disable the gold linker for static builds on
>>>>>>>>>>> Ubuntu 14.04.
>>>>>>>>>>> >> >> ENH: Use Windows binaries for CastXML.
>>>>>>>>>>> >> >> ENH: Add better scoping in igenerator.py.
>>>>>>>>>>> >> >> BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja +
>>>>>>>>>>> MSVC.
>>>>>>>>>>> >> >> BUG: LevelSetsv4 used signed char instead of char.
>>>>>>>>>>> >> >> ENH: Add better scoping to idx.py.
>>>>>>>>>>> >> >> COMP: Define newSize and oldSize in
>>>>>>>>>>> VariableLengthVector.
>>>>>>>>>>> >> >> STYLE: Use prefix increment operator in ImageBase.
>>>>>>>>>>> >> >> DOC: Correct spelling of Continuous.
>>>>>>>>>>> >> >> ENH: Add more progress information to
>>>>>>>>>>> IterativeClosestPoint2.
>>>>>>>>>>> >> >> BUG: Build BridgeNumPy with Visual Studio.
>>>>>>>>>>> >> >> ENH: Add ITKModuleExternal.cmake
>>>>>>>>>>> >> >> COMP: Wrap Image< bool, D > for
>>>>>>>>>>> FlatStructuringElement.
>>>>>>>>>>> >> >> BUG: Use CastXML binary built in Release.
>>>>>>>>>>> >> >> BUG: ContinuousIndex should not be templated over
>>>>>>>>>>> TCoordRep.
>>>>>>>>>>> >> >> COMP: Set CMP0054 to new.
>>>>>>>>>>> >> >> COMP: Address line length too long for Software Guide.
>>>>>>>>>>> >> >> COMP: Fix CannyEdgeDetectionImageFilter.cxx types.
>>>>>>>>>>> >> >> BUG: Support Python 3 wrapping module initialization.
>>>>>>>>>>> >> >> BUG: Update itkTemplate.py for Python 3.
>>>>>>>>>>> >> >> BUG: Update itkExtras.py for Python 3.
>>>>>>>>>>> >> >> BUG: Prevent Python callback addition recursion.
>>>>>>>>>>> >> >> BUG: Fix test scripts for Python 3.
>>>>>>>>>>> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>>>>>>>>>>> >> >> ENH: Allow projects to build against an external
>>>>>>>>>>> module.
>>>>>>>>>>> >> >> ENH: Replace CABLE_CONFIGURATION with
>>>>>>>>>>> ITK_WRAPPING_PARSER.
>>>>>>>>>>> >> >> ENH: Rename _cable_ to _wrappers_.
>>>>>>>>>>> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>>>>>>>>>>> >> >> BUG: Define ITK_WRAPPING_PARSER when wrapping.
>>>>>>>>>>> >> >> COMP: Do not use C++11 alignas in itkAlignedTypedef.
>>>>>>>>>>> >> >> ENH: Bump CMakeLists.txt version to 4.8.1.
>>>>>>>>>>> >> >> BUG: Pass the CMAKE_CXX_FLAGS to castxml.
>>>>>>>>>>> >> >> ENH: Bump CastXML version to 2015-30-29.
>>>>>>>>>>> >> >> ENH: Bump LLVM / Clang to 3.7.0.
>>>>>>>>>>> >> >> COMP: Avoid itklibminc linking with
>>>>>>>>>>> ITK_USE_SYSTEM_HDF5.
>>>>>>>>>>> >> >> COMP: Add missing ITKIOImageBase dependency for
>>>>>>>>>>> ITKTransformMINC.
>>>>>>>>>>> >> >> COMP: Use itkSimpleNewMacro in
>>>>>>>>>>> >> >> ThreadedIteratorRangePartitionerTest.
>>>>>>>>>>> >> >> ENH: Add wrapping support for building modules
>>>>>>>>>>> externally.
>>>>>>>>>>> >> >> BUG: Fix KWStyle test paths when building a module
>>>>>>>>>>> externally.
>>>>>>>>>>> >> >> ENH: Add Cuberille Remote module.
>>>>>>>>>>> >> >> COMP: Remove carriage returns from Cuberille remote.
>>>>>>>>>>> >> >> COMP: Remove unused argument in
>>>>>>>>>>> ConditionVariableNoThreads.
>>>>>>>>>>> >> >> DOC: Correct spelling of Continuous.
>>>>>>>>>>> >> >> ENH: Bump the MinimalPathExtraction Remote to
>>>>>>>>>>> 2015-10-20.
>>>>>>>>>>> >> >> COMP: Fix KernelTransform SetFixedParameters argument
>>>>>>>>>>> type.
>>>>>>>>>>> >> >> STYLE: Use prefix increment operator in ImageBase.
>>>>>>>>>>> >> >> COMP: Use ITK's pygccxml by correctly setting up the
>>>>>>>>>>> sys.path
>>>>>>>>>>> >> >> Revert "COMP: Put vnl_export.h in the list of sources
>>>>>>>>>>> so it gets
>>>>>>>>>>> >> >> installed."
>>>>>>>>>>> >> >> BUG: Revert "BUG: ConvertLabelMap with different
>>>>>>>>>>> LabelMapTypes"
>>>>>>>>>>> >> >> ENH: Marking wrapping CMake configuration variables
>>>>>>>>>>> as advanced.
>>>>>>>>>>> >> >> STYLE: Rename CASTXML to CASTXML_EXECUTABLE.
>>>>>>>>>>> >> >> COMP: Non-virtual copy attribute members in LabelMap
>>>>>>>>>>> cannot have
>>>>>>>>>>> >> >> override.
>>>>>>>>>>> >> >> COMP: Add wrapping for
>>>>>>>>>>> AdaptiveHistogramEqualizationImageFilter.
>>>>>>>>>>> >> >> COMP: Add itkMacro.h to itkPromoteType.h for
>>>>>>>>>>> ITK_EXCEPT.
>>>>>>>>>>> >> >> ENH: Remove CMake version check in
>>>>>>>>>>> ITKModuleHeaderTest.cmake
>>>>>>>>>>> >> >> BUG: Improve KWStyle ExternalProject utilization.
>>>>>>>>>>> >> >> ENH: Remove old KWStyle build script.
>>>>>>>>>>> >> >> COMP: Address VariableLengthVector Doxygen rhs @param
>>>>>>>>>>> not found.
>>>>>>>>>>> >> >> ENH: Rename WRAPPING_LIBRARY_GROUPS to
>>>>>>>>>>> WRAPPING_SUBMODULE_ORDER.
>>>>>>>>>>> >> >> ENH: Install Python bindings into site-packages.
>>>>>>>>>>> >> >> ENH: Improve readability of Python site-packages path
>>>>>>>>>>> detection.
>>>>>>>>>>> >> >> COMP: DiscreteGaussianDerivativeImageFilter unsigned
>>>>>>>>>>> expression
>>>>>>>>>>> >> >> warning.
>>>>>>>>>>> >> >> BUG: ITKCommon publically depends on
>>>>>>>>>>> ITKDoubleConversion.
>>>>>>>>>>> >> >> COMP: Improve scoping in CovariantVectorGeometryTest.
>>>>>>>>>>> >> >> ENH: Improves names and export of module dependencies.
>>>>>>>>>>> >> >> STYLE: Improve namespace bracket style in
>>>>>>>>>>> itkIsConvertible.
>>>>>>>>>>> >> >> COMP: Set CMP0054 to new.
>>>>>>>>>>> >> >> BUG: Remove unused wrapping files.
>>>>>>>>>>> >> >> BUG: Do install install wrapping development files.
>>>>>>>>>>> >> >> ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.
>>>>>>>>>>> >> >> BUG: Remove duplicate inclusion of wrapping
>>>>>>>>>>> submodules.
>>>>>>>>>>> >> >> COMP: Do not use C++ style comments for Doxygen cond.
>>>>>>>>>>> >> >> BUG: Fix detection of the gold linker.
>>>>>>>>>>> >> >> BUG: Update Python package installation locations.
>>>>>>>>>>> >> >> ENH: Bump CMakeLists.txt version to 4.8.2.
>>>>>>>>>>> >> >> ENH: Change BUILD_EXAMPLES default to OFF.
>>>>>>>>>>> >> >> BUG: Use 'from itk import ITKCommon' in module2module
>>>>>>>>>>> test.
>>>>>>>>>>> >> >> COMP: Link to VTK Python when built with Kits support.
>>>>>>>>>>> >> >> BUG: Install itk_minc2.h header.
>>>>>>>>>>> >> >> COMP: ITKIOMINC has a public dependency on
>>>>>>>>>>> ITKIOImageBase.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Michka Popoff (9):
>>>>>>>>>>> >> >> ENH: Update to swig 3.0.7
>>>>>>>>>>> >> >> ENH: Do not link against specific Python library on
>>>>>>>>>>> OS X
>>>>>>>>>>> >> >> COMP: Fix wrapping warnings when building with
>>>>>>>>>>> >> >> ITK_WRAP_IMAGE_DIMS=2
>>>>>>>>>>> >> >> COMP: Add missing wrapping for TransformBase
>>>>>>>>>>> >> >> COMP: Use ITK's pygccxml by correctly setting up the
>>>>>>>>>>> sys.path
>>>>>>>>>>> >> >> COMP: Disable incompatible modules when using Python
>>>>>>>>>>> 3 wrapping
>>>>>>>>>>> >> >> COMP: Move MovingHistogramImageFilterBase wrapping to
>>>>>>>>>>> >> >> ImageFilterBase
>>>>>>>>>>> >> >> module
>>>>>>>>>>> >> >> COMP: Disable incompatible modules when using Python
>>>>>>>>>>> 3 wrapping
>>>>>>>>>>> >> >> ENH: Allow operations on Indexes and Offsets in Python
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Mikhail Isakov (1):
>>>>>>>>>>> >> >> BUG: DiffusionTensor3DReconstruction segfault if no
>>>>>>>>>>> baseline image
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Nick Tustison (5):
>>>>>>>>>>> >> >> BUG: Set a default b-spline epsilon.
>>>>>>>>>>> >> >> ENH: Adding testing for closed loop.
>>>>>>>>>>> >> >> BUG: Updating B-spline classes with the same epsilon
>>>>>>>>>>> strategy.
>>>>>>>>>>> >> >> PERF: Switch vnl_vectors for fixed arrays.
>>>>>>>>>>> >> >> ENH: Point-set registration with time-varying
>>>>>>>>>>> B-spline.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Olivier Commowick (3):
>>>>>>>>>>> >> >> BUG: Correct discrepancy in tridiagonal reduction wrt
>>>>>>>>>>> VNL eigen
>>>>>>>>>>> >> >> system
>>>>>>>>>>> >> >> BUG: Correct under/overflows in vnl_math_hypot (taken
>>>>>>>>>>> from pythag
>>>>>>>>>>> >> >> from V3P)
>>>>>>>>>>> >> >> BUG: Switch eigenvalues computation to double
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Pablo Hernandez-Cerdan (2):
>>>>>>>>>>> >> >> ENH: Help class for itkFlatStructuringElement with
>>>>>>>>>>> constructor
>>>>>>>>>>> >> >> from
>>>>>>>>>>> >> >> images.
>>>>>>>>>>> >> >> COMP: Fix test errors and warnings in
>>>>>>>>>>> FlatStructuringElement.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Seun Odutola (1):
>>>>>>>>>>> >> >> COMP: Fixed name clash with Apple header (check
>>>>>>>>>>> Macro), renamed
>>>>>>>>>>> >> >> check
>>>>>>>>>>> >> >> to Check
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Shawn Waldon (1):
>>>>>>>>>>> >> >> COMP: Set target OS X version in environment for
>>>>>>>>>>> tools using
>>>>>>>>>>> >> >> compiler
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Simon Alexander (1):
>>>>>>>>>>> >> >> BUG: incorrect closest point computation
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Tobias Wood (2):
>>>>>>>>>>> >> >> BUG: LBFGSB was printing messages even with debug
>>>>>>>>>>> switched off.
>>>>>>>>>>> >> >> BUG: Removed an unguarded print statement.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Vladimir S. FONOV (9):
>>>>>>>>>>> >> >> BUG: Missing ITKIOMINC_EXPORT on __Private()
>>>>>>>>>>> >> >> COMP: Changing the order of HDF5 library components
>>>>>>>>>>> >> >> COMP: Splitting up IOMINC module into two parts: MINC
>>>>>>>>>>> and
>>>>>>>>>>> >> >> Transform
>>>>>>>>>>> >> >> STYLE: updated comments to properly reference LIBMINC
>>>>>>>>>>> >> >> ENH: Add script to merge upstream MINC as a subtree
>>>>>>>>>>> >> >> MINC 2015-07-23 (c033d431)
>>>>>>>>>>> >> >> COMP: Update MINC CMake code
>>>>>>>>>>> >> >> MINC 2015-08-18 (6d7e3ba8)
>>>>>>>>>>> >> >> MINC 2015-09-13 (95cd5374)
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Xiaoxiao Liu (1):
>>>>>>>>>>> >> >> DOC: update email address for xiaoxiao.
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Zach Williamson (10):
>>>>>>>>>>> >> >> BUG: Use correct libraries for ImageFusion tests
>>>>>>>>>>> >> >> ENH: Consolidate Library Dependencies
>>>>>>>>>>> >> >> COMP: Add a missing link to Review module
>>>>>>>>>>> >> >> COMP: Use correct linking macro in DCMTK
>>>>>>>>>>> >> >> BUG: Use correct libraries for TestKernel tests
>>>>>>>>>>> >> >> COMP: Fix inconsistant naming of
>>>>>>>>>>> GPUPDEDeformableRegistration
>>>>>>>>>>> >> >> ENH: Use new linking system macros
>>>>>>>>>>> >> >> PERF: Avoid searching private dependencies for
>>>>>>>>>>> include directories
>>>>>>>>>>> >> >> COMP: Recover missing dependencies
>>>>>>>>>>> >> >> ENH: use new linking macros in Filtering module
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> -----------------------------------------------------
>>>>>>>>>>> >> >> Errors or omissions? Please fix them here:
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >>
>>>>>>>>>>> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit
>>>>>>>>>>> >> >> _____________________________________
>>>>>>>>>>> >> >> Powered by www.kitware.com
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Visit other Kitware open-source projects at
>>>>>>>>>>> >> >> http://www.kitware.com/opensource/opensource.html
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Kitware offers ITK Training Courses, for more information
>>>>>>>>>>> visit:
>>>>>>>>>>> >> >> http://www.kitware.com/products/protraining.php
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Please keep messages on-topic and check the ITK FAQ at:
>>>>>>>>>>> >> >> http://www.itk.org/Wiki/ITK_FAQ
>>>>>>>>>>> >> >>
>>>>>>>>>>> >> >> Follow this link to subscribe/unsubscribe:
>>>>>>>>>>> >> >> http://public.kitware.com/mailman/listinfo/insight-users
>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> _______________________________________________
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>> Powered by www.kitware.com
>>>>>>>>>>
>>>>>>>>>> Visit other Kitware open-source projects at
>>>>>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>>>>>
>>>>>>>>>> Kitware offers ITK Training Courses, for more information visit:
>>>>>>>>>>
>>>>>>>>> http://kitware.com/products/protraining.php
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>>>>>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>>>>>>>
>>>>>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>>>>>>
>>>>>>>>> http://public.kitware.com/mailman/listinfo/insight-developers
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>
>>>>>>>
>>>>>
>>>
>>
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