[ITK-users] [ANN] ITK 4.9 Release Candidate 3 is ready for testing!
Simon Alexander
skalexander at gmail.com
Mon Jan 4 19:56:54 EST 2016
Thanks!
Clean build and test on my machine this time, show's green on the dash for
4th.
On Tue, 22 Dec 2015 at 15:57 Matt McCormick <matt.mccormick at kitware.com>
wrote:
> On behalf of the Insight Toolkit community, we are proud to announce
> that ITK 4.9 release candidate 3 has been tagged and is available for
> testing! Please take this opportunity to test the new features in the
> release candidate.
>
>
> To obtain the source code,
>
> git clone http://itk.org/ITK.git
> cd ITK
> git checkout -q --detach v4.9rc03
>
> For more details, please see the Git documentation [1].
>
>
> A few selected highlights for this release:
>
> * New Remote modules: the Cuberille module for smooth generation of
> meshes from binary segmentation images, and the
> AnisotropicDiffusionLBR module improved edge-preserving smoothing.
> * Build your own ITK module outside the source tree, add continuous
> integration testing on GitHub, and easily add Python wrapping for your
> C++ algorithms.
> * Python wrapping, including Python 3, builds faster with a more
> standard installation
> * Improved performance of itk::Image::GetPixel and operations on
> itk::VariableLengthVector’s
> * Generate a FlatStructuringElement from an image
> * Point-set registration with time-varying B-splines
> * Module dependencies can now be specified as public / private / compile /
> test
>
>
> Please test the release candidate and share your experiences on the
> mailing list, issue tracker, and Gerrit Code Review. The new module
> dependency specification mechanism may unearth missing dependencies
> for projects that use ITK COMPONENTS with the CMake find_package
> command.
>
>
> An Experimental build, which demonstrates how the test suite performs
> on your local build system, can be submitted to the dashboard [2]
> with:
>
> mkdir ../ITK-build
> cd ../ITK-build
> cmake ../ITK
> ctest -j 4 -M Experimental -T Configure -T Build -T Test -T Submit
>
> Visual Studio builds must also add “-C Release” to the ctest command.
>
> Notify the mailing list if there are any unexpected failures. Testing
> your own applications against the RC is also appreciated.
>
>
> Congratulations and well done to the 43 contributors to this release.
> We would especially like to recognize the new contributors: Mikhail
> Isakov, Betsy McPhail, Luc Hermitte, Shawn Waldon, Tobias Wood,
> Ricardo Ortiz, Sreekanth Arikatla, Hyun Jae Kang, Lucas Gandel, Adam
> Snyder, Junjie Bai, Seun Odutola, Abhishek Tiwari, Eugene Prilepin,
> Zach Williamson, Alexander Leinoff, Alexis Girault, Laurentiu Nicola,
> Floris Berendsen, Max Smolens, and Pablo Hernandez-Cerdan.
>
> Many community members stepped up to contribute fixes for this release
> candidate. To allow testing and accommodate the upcoming holiday, the
> final release is re-scheduled for mid-January.
>
>
> Known issues in this release candidate, to be fixed before the final
> release:
> * TransformReadWriteTest fails on Mac OSX with shared libraries.
> * Mac OSX 10.6 has build errors.
>
>
> [1] http://www.itk.org/Wiki/ITK/Git
>
> [2] http://open.cdash.org/index.php?project=Insight
>
>
>
> New Features
> ---------------------
>
> * Wrapping improvements
> * Python 3 supported
> * Wrapping builds much faster due to CastXML binaries
> * LandmarkBasedTransformInitializer now wrapped
> * NumPy bridge with VisualStudio
> * Wrapping for the MinimalPathExtraction module
> * Wrapping is now installed into Python’s site-packages directory
> in the “itk” package
> * Wrapping package size is decreased
> * Better package portability on Mac OSX
>
> * New Remote Modules
> * Cuberille
> * Insight Journal Article: http://hdl.handle.net/10380/3186
> * AnisotropicDiffusionLBR
> * Insight Journal Article: http://hdl.handle.net/10380/3505
> * Web browser reproducibility:
> http://www.kitware.com/blog/home/post/942
>
> * Core Improvements
> * External Modules can now be developed outside of the ITK source
> tree and on GitHub
> * Details: http://www.kitware.com/blog/home/post/997
> * New utilities in itk::Math:
> * AlmostEquals
> * NotAlmostEquals
> * ExactlyEquals
> * NotExactlyEquals
> * New itk::NumericTraits
> * IsInteger
> * IsSigned
> * Improved C++11 support
> * New ITK_DELETE_FUNCTION macro for “=delete”
> * New ITK_NOEXCEPT macro for the “noexcept” keyword
> * Improved capabilities of itk::ResourceProbe and
> itk::ResourceProbesCollectorBase
> * Improve numerical stability in VNL eigen system estimation
> * itksys_ios:: and itksys_stl:: have been remove (use std::)
>
> * Filtering Improvements
> * Generate a FlatStructuringElement from an image
> * WarpImageFilter support VectorImage’s
> * ConvertLabelMap supports different LabelMap types
> * ImageToPathFilter moved from the ITKReview to the ITKPath module
> * itk::MovingHistogramImageFilter moved to the ITKImageFilterBase module
>
> * Registration Improvements
> * Point-set registration with time-varying B-splines
>
> * Build Improvements
> * Module dependencies can now be specified as public / private /
> compile / test
> * BUILD_EXAMPLES CMake option is now OFF by default
> * Option to export all library symbols on Windows:
> * Details: http://www.kitware.com/blog/home/post/939
> * Expat third party library is now name mangled
> * Many more modules can be built as shared libraries
> * KWStyle is automatically built and configured when tests are built
>
> * Performance Improvements
> * New MetaProgrammingLibrary namespace (itk::mpl) holds members for
> metaprogramming
> * itk::mpl::{TrueType,FalseType}
> * itk::mpl::{If,Not,And,Or,Xor}
> * itk::mpl::EnableIf
> * itk::mpl::IsBaseOf
> * itk::mpl::IsConvertible
> * itk::mpl::IsNumber
> * itk::mpl::IsSame
> * itk::mpl::PromoteType
> * Image::GetPixel performance improvements
> * Many itk::VariableLengthVector performance improvements
> * AdaptiveHistogramEqualization uses a moving histogram
> * WarpImageFilter performance improvements
>
> * Documentation Improvements
> * Updates to the Software Guide, Doxygen, Wiki and Sphinx Examples
> * ITK Software Guide improvements
> * How to use Python wrapping
> * How to create an ITK module
> * Improvements to segmentation examples
> * Expanded Canny edge detection example
> * Expanded tree container example
>
> * Third Party Library Updates
> * FFTW updated to latest upstream
> * Build with recent OpenCV 2 and 3
> * Build with the latest VTK
> * PNG update to the latest upstream
> * GDCM updated to the latest upstream
> * KWSys updated to the latest upstream
> * MINC updated to the latest upstream
> * SWIG updated to the latest upstream
> * Third party PNG and MINC are now Git subtrees
>
> * Style improvements -- ITK gets more stylish with every release!
> * Private copy constructors and operator= use ITK_DELETE_FUNCTION
>
> * Improved code coverage -- we are at 84.9%!
>
> * *Lots* of important bug fixes
>
> * And much more! See details in the log below.
>
>
> Changes from v4.9rc02..v4.9rc03
> ------------------------------------------------
>
> Alexis Girault (1):
> BUG: Implement SetAutoMinimumMaximum in
> itkScalarImageToHistogramGenerator
>
> Bill Lorensen (1):
> BUG: nifti_read_subregion_image was leaking file pointers
>
> Brad King (7):
> ENH: Teach ITK module macros to support independent header-only
> modules
> ENH: Add script to import KWIML library source code
> ENH: Add `ITKKWIML` module to provide external KWIML library
> ENH: Port TIFF integer types from KWSys to KWIML
> ENH: Port LSM integer types from KWSys to KWIML
> ENH: Port itkIntTypes.h from KWSys to KWIML
> ENH: Drop KWSys FundamentalType component
>
> Bradley Lowekamp (1):
> ENH: Add option to choose scheme for git download
>
> Davis Vigneault (1):
> STYLE: Use cstdlib return macros in ITK examples
>
> Dženan Zukić (3):
> BUG: do not pass 0,0,0 to Versor.Set()
> STYLE: Removing the unused NeighborhoodRadius property
> ENH: Write out transform in DeformableRegistration15
>
> Gert Wollny (1):
> BUG: Remove double-conversion from public interface, use system.
>
> Hyun Jae Kang (8):
> ENH: Use a data struct to export the system information of a probe.
> ENH: Create a test for the SpawnThread function ( ITK-3317)
> STYLE: Remove an unnecessary file (-w) from source code
> BUG: Fixed the failed case of itkStdStreamStateSaveTest on OS X 10.8
> BUG: Fixed the failed test case of itkThreadPoolTest on OS X 10.8
> BUG: Fixed a failed test of ITKDistanceMapTestDriver
> BUG: Fixed the failed test VideoSourceTest
> PERF: Improve the performance of a test of
> ITKRegistrationMethodsv4TestDriver
> COMP: Fixed the compiler error of
> itkDisplacementFieldToBSplineImageFilterTest
>
> Jean-Christophe Fillion-Robin (25):
> BUG: Build ITKIOTransformHDF5 as shared library. See #3393
> BUG: Build ITKIOTransformMINC as shared library. See #3393
> BUG: Build ITKIOTransformMatlab as shared library. See #3393
> BUG: Build ITKIOTransformInsightLegacy as shared library. See #3393
> STYLE: TransformIOFactory: Remove obsolete declaration. See #3393
> COMP: TransformIOFactory: Add missing ctor/dtor from hxx file. See
> #3393
> COMP: TransformFileWriter: Remove method "OpenStream()" without
> definition
> COMP: TransformFileReaderTemplate: Remove undefined method
> "CreateTransform()"
> ENH: Update ITKIOPhilipsREC to allow static initialization. See #3393
> ENH: Update ITKIOTransformMINC to allow static initialization. See
> #3393
> COMP: MINC: Fix VS2008 "unknown round" build error. See #3393
> COMP: MINC: Fix VS2008 "unknown arpa/inet.h" build error. See #3393
> COMP: Configure ENABLE_SHARED into <ModuleName>.cmake file. See #3393
> COMP: Fix configuration of IOFactory header. See #3393
> STYLE: UseITK: Removed redundant code setting ImageIO factory
> name. See #3393
> STYLE: UseITK: Re-factor introducing
> _configure_IOFactoryRegisterManager
> STYLE: UseITK: Set TransformIO factory and module name using
> convention.
> BUG: Ensure Image IO factories are registered once. See #3393
> BUG: Ensure Transform IO factories are registered once.
> COMP: ITKIOXML: Fix VS11 "already defined std::string" link
> error. See #3393
> BUG: TransformIO: Implement explicit template instantiation
> using "extern".
> COMP: TransformIO: Fix VS build errors removing extra EXPORT
> COMP: TransformIO: Handle compiler not supporting "pragma
> diagnostic".
> COMP: TransformIO: TransformFile(Reader|Writer) still need to be
> exported.
> COMP: TransformIO: Fix explicit instantiation approach
>
> Johan Andruejol (1):
> ENH: Add ITK_RUNTIME_LIBRARY_DIRS for external projects
>
> KWIML Upstream (1):
> KWIML 2015-12-09 (43f9f8d0)
>
> Lucas Gandel (1):
> BUG: PhysicsBasedNonRigidRegistrationMethod test failure on Debian
> 32bit
>
> Matthew McCormick (16):
> COMP: Fix PointDimension reference in AzimuthElevationToCartesian
> test.
> STYLE: Improve scoping in AzimuthElevationToCartesian test.
> STYLE: Explicitly mark the ProcessObject methods virtual in
> SignedMaurer.
> BUG: Do not try to install targets that do not exist when
> building externally.
> BUG: ITKIOMeta needs a public dependency on ITKMetaIO.
> COMP: Update LesionSizingToolkit for external build and style
> test failures.
> BUG: Add CMake OpenCV export code to ITKVideoBridgeOpenCV.
> COMP: Improve compatibility with OpenCV 3.
> DOC: Fix class references in StatisticsLabelMapFilter.
> STYLE: Improved readability of
> itkStatisticsUniqueLabelMapFilterTest1.
> DOC: Correct ReverseOrdering description in
> ShapeUniqueLabelMapFilter.
> STYLE: Add own copy of GenerateExportHeader
> COMP: Create _TEMPLATE_EXPORT macros.
> COMP: TransformIOBaseTemplate must be explicitly instantiated.
> BUG: Do not use dynamic_cast for DisplacementFieldType in HDF5 test.
> COMP: Do not use string(MAKE_C_IDENTIFIER with CMake < 2.8.12
>
> Max Smolens (1):
> BUG: VoronoiSegmentationRGBImageFilter: add pixel dimension check
>
> Mikhail Isakov (1):
> DOC: correction in DiffusionTensor3D Reconstruction
>
> Ricardo Ortiz (1):
> BUG: Set itkBinaryImageTo*LabelMapFilter foreground/background values
>
> Seun Odutola (1):
> BUG: absolute value of tolerance taken to cater for negative spacing
>
> Shawn Waldon (1):
> COMP: OSX set deployment target when building fftw
>
> Simon Alexander (4):
> STYLE: Change to make git bash on windows happy with the function
> name
> COMP: fixes for visual studio 2015update1 x86 in release mode
> COMP: fixes for visual studio 2015update1 x86 in release mode
> COMP: fixes for visual studio 2015update1 x86 in release mode
>
> Sreekanth Arikatla (2):
> BUG: Resolved const correctness in itkMatrix.h
> ENH: Fixes the symmetry of AzimuthElevationToCartesianTransform
> and adds tests
>
>
> Changes from v4.9rc01..v4.9rc02
> ------------------------------------------------
>
> Bill Lorensen (1):
> BUG: Valgrind detected an invalid read
>
> Davis Vigneault (1):
> STYLE: Address some warnings when running cppcheck
>
> Hyun Jae Kang (2):
> COMP: Fixed a warning message of data-conversion on VS14
> COMP: Update KWStyle to remove format-string warning message
>
> Matthew McCormick (3):
> DOC: Remove invalid wrapping example.
> BUG: Wrap AdaptiveEqualizationHistogram.
> COMP: Ignore Doxygen endcond warning in itkIsConvertible.h.
>
> Seun Odutola (1):
> COMP: Corrected minc2.h path installation from libsrc2/minc2.h to
> minc2.h
>
> Ziv Yaniv (2):
> BUG: Affine transformation was estimated without sufficient
> number of points.
> BUG: fixed BSpline initializer crash when reference image not set.
>
>
> Changes from v4.8.0..v4.9rc01
> --------------------------------------------
>
> Abhishek Tiwari (1):
> BUG: "tmpImageIndex" not initialized to 0.
>
> Adam Snyder (1):
> PERF: Reworked MMI Threading using a per-thread buffer
>
> Alexander Leinoff (6):
> ENH: Adds IsInteger and IsSigned to NumericTraits.
> COMP: Doxygen itkMath.h 'OneValue()' could not be resolved.
> ENH: Adds ExactlyEquals and NotExactlyEquals functions to itkMath.h
> COMP: Removes floating-point equality checks
> ENH: COMP: Adds support for complex values to Math::AlmostEquals
> ENH: Updates fftw dependency
>
> Arnaud Gelas (5):
> COMP: fix warning (unused local typedef)
> COMP: simplify ITKVideoBridgeOpenCV dependency
> DOC: add doxgen documentation for BinaryImageToLevelSetImageAdaptor
> ENH: add tests to exercise itk::ThreadedIteratorRangePartitioner
> COMP: fix compilation error with OpenCV2 and OpenCV3
>
> Betsy McPhail (1):
> BUG: Improve buffer alignment in OctreeNode .
>
> Bill Hoffman (2):
> ENH: Use new CMake Windows export symbol dll feature.
> COMP: Put vnl_export.h in the list of sources so it gets installed.
>
> Bill Lorensen (4):
> COMP: VTkGlue linker errors
> BUG: Inappropriate use of AlmostEquals
> ENH: Bump tag for wiki examples
> ENH: Better layout strategy
>
> Brad King (3):
> ENH: Remove use of include <itksys/ios/*> and itksys_ios::*
> ENH: Remove use of include <itksys/stl/*> and itksys_stl::*
> ENH: Update CMake Policy settings in Testing/TestExternal project
>
> Bradley Lowekamp (31):
> BUG: Avoid null deference in PrintSelf with default construction
> ENH: Enable base classes for templates of landmark initializer
> STYLE: Use "Swap" for ITK member name
> BUG: Demonstrate Eigen analysis failure
> BUG: Fix computation of Eigen analysis
> ENH: Update DiscreteHessianGaussian Test baseline
> ENH: Correctly demonstrate float point Eigen failure
> ENH: compile vnl_math_hypot, and use at least double
> ENH: Adding initial update script from used libpng version.
> ENH: removing non-subtree files for itkpng
> ENH: Ported ITK changes for building to subtree merged code
> ENH: Update libpng update script for v1.6.9
> BUG: Use ParameterValueType for computation of landmark affine
> ENH: Wrap LandmarkBasedTransformInitializer
> BUG: Avoid potential exception in itk::Object::UnRegister
> ENH: Update itkpng zlib, configuration, and rename
> ENH: Update itkpng name mangling
> BUG: Use const pointer in Set method for constant ReferenceImage ivar
> BUG: Increase tolerance for PhysicsBasedNonRigidRegistrationMethod
> BUG: Demonstrate side effect on registration due to BSplineScatter
> change
> ENH: Move MovingHistogramImageFilter base classes to ImageFilterBase
> BUG: Avoid potential exception in itk::Object::UnRegister
> BUG: Avoid null deference in PrintSelf with default construction
> BUG: Use const pointer in Set method for constant ReferenceImage ivar
> ENH: Optimize AdaptiveHistogramEqualization with MovingHistogram base
> COMP: address sign unsigned comparison warning
> COMP: Address signed unsigned comparison warning
> COMP: Address unused member variable and methods in anonymous ns
> BUG: Fix segfault when with empty IsolatedWatershed Threshold range
> BUG: Adjust intensity tolerance for PhysicsBasedNonRigid test
> BUG: Reduce number of targets with MSVC
>
> Davis Vigneault (7):
> DOC: Minor improvements to segmentation examples.
> DOC: Expanded Canny Edge Detection Example
> DOC: Expanded TreeContainer Example
> COMP: Warnings in itkVTKImageExport when compiling with c++11
> COMP: Warnings in FFTW Classes when compiling with c++11
> COMP: Update Git Tag for Subdivision Module
> COMP: Warnings in FFTW Classes when compiling with c++11
>
> Dženan Zukić (1):
> STYLE: better formatting of the "usage" message
>
> Eugene Prilepin (1):
> BUG: Fix a template name formation in python wrappings
>
> Floris Berendsen (1):
> STYLE: Improve naming conventions in comments.
>
> Hans Johnson (29):
> STYLE: Instrument for FixedParameters typedef
> BUG: Demonstrate DisplacementTransformFailure
> BUG: FixedParameters should be double precision
> STYLE: Minor code style issues for MGHIO
> COMP: Update to version for WikiExamples
> ENH: Update Sphinx for ITK 4.8.0
> ENH: Update MGHIO to be shared lib
> ENH: Provide consistent floating point comparisons
> BUG: Fix MGHIO to fix write failures
> PERF: Remove floating point as sentinal value
> COMP: Const correctness needs to be maintained
> BUG: Preserve backwards compatibility
> DOC: Provide consistent naming in comments
> ENH: Conversion between transform type tolerance
> STYLE: Prefer initialization to assignment
> ENH: Missing ITK_OVERRIDE
> COMP: Need to propagate ITKGDCM
> COMP: Need to propagate ITKGDCM
> COMP: Add missing ITK_OVERRIDE
> STYLE: Minor code style issues for MGHIO
> COMP: Update to version for WikiExamples
> ENH: Update Sphinx for ITK 4.8.0
> ENH: Update MGHIO to be shared lib
> BUG: Fix MGHIO to fix write failures
> ENH: C++11 allows for rigorous =delete
> COMP: Remove unnecessary failing assert test
> ENH: Ignore internal files for the Clion editor
> COMP: Fix VNL compilation for wider C++11 support
> BUG: In configuration test need to mirror code
>
> Hyun Jae Kang (27):
> BUG: Remove std::cout calls from class
> BUG: Avoid an unexpected output of static_cast
> BUG: Update python example codes for ImageRegistration
> BUG: Retrieve the missed wrap file
> BUG: itkVTKImageIO class does not handle blank lines in VTK file
> header.
> BUG: Fix HDF5 CMake configuration with VS2015
> BUG: Fix a compilation issue on ITK4 with FFTW and shared libraries
> BUG: Fixed older XCode linking error
> ENH: Use CastXML binaries when building with x86_64 Mac OS X
> BUG: Remove std::cout calls from class
> BUG: itkVTKImageIO class does not handle blank lines in VTK file
> header.
> BUG: Fixed older XCode linking error
> ENH: Add automatic KWStyle build and configuration setup
> COMP: KWStyle shadow, format-nonliteral and autological-compare
> warning.
> COMP: Fixed the warning messages from itkGPU Module
> COMP: Fixed a warning message of unused-private-field
> COMP: Apply latest version of KWStyle
> COMP: Update KWStyle to fix its additional warning messages
> COMP: Update KWStyle to fix its additional warning messages
> COMP: Fix data-conversion warning messages on Windows
> ENH: Update itkResourceProbe to calculate statistical data
> COMP: Fix data-conversion warning messages on VS14
> COMP: Fixed 'std::sqrt' : ambiguous call to overloaded function
> ENH: Update the Report() function of itkResourceProbesCollectorBase
> COMP: Fix data-conversion warning message on itkResourceProbe
> COMP: Fix additional warning messages of KWStyle
> COMP: Fix data-conversion warning messages
>
> Jon Haitz Legarreta (6):
> ENH: Add test for itkStatisticsUniqueLabelMapFilter
> BUG: Fix compilation issues for StatisticsUniqueLabelMapFilterTest
> BUG: Fix comparison issues for itkStatisticsUniqueLabelMapFilter
> BUG: Test for StatisticsUniqueLabelMapFilter stability
> ENH: Add test for itkParametricStpaceToImageSpaceFilter
> ENH: Improve code coverage for
> itkParametricSpaceToImageSpaceMeshFilter
>
> Julien Michel (1):
> ENH: Support of VectorImage as template parameters for WarpImageFilter
>
> Junjie Bai (2):
> BUG: ConvertLabelMap with different LabelMapTypes
> BUG: LabelObject CopyAttribute support different LabelObject type
>
> KWSys Robot (4):
> KWSys 2015-07-10 (c9336bcf)
> KWSys 2015-07-30 (f63febb7)
> KWSys 2015-08-24 (cdaf522c)
> KWSys 2015-08-28 (dc3fdd7f)
>
> LIBPNG Upstream (2):
> PNG 2009-04-06 (e68f5a36)
> PNG 2014-02-05 (3e753eb8)
>
> Laurentiu Nicola (2):
> PERF: Avoid temporary smartptr in ProcessObject::GetInput
> PERF: Optimize WarpImageFilter by avoiding refcount bouncing
>
> Luc Hermitte (8):
> PERF: itk::Image::GetPixel() performance improvment.
> PERF: Performance enhancements on VariableLengthVectors 1/...
> ENH: Dependencies on itkVariableLengthVector.h reduced
> BUG: Error in VariableLengthVector Unit Tests
> PERF: Performance enhancements on VLV 2/...
> PERF: Performances enhancements on VLV 3/...
> COMP: Fix signed/unsigned warnings
> BUG: std::copy/fill on empty VLV
>
> Lucas Gandel (4):
> ENH: Move ImageToPathFilter from ITKReview to ITKPath module.
> BUG: Fixing ImageToPathFilter wrapping call from Review Module
> STYLE: Fix KWStyle dashboard errors
> BUG: Fix external module BUILD_SHARED_LIBS status
>
> Mathieu Malaterre (1):
> BUG: Name mangle the included expat third party library.
>
> Matthew McCormick (94):
> ENH: Change itkSystemInformationTest to itkCMakeConfigurationTest.
> ENH: Add AnisotropicDiffusionLBR Remote Module.
> ENH: Bump ITK version to 4.9.0.
> BUG: Remove std::cout calls from classes.
> COMP: Remove unused argument in ConditionVariableNoThreads.
> BUG: Implement UpdateLargestPossibleRegion for ImageToVTKImageFilter.
> COMP: Add link interface specification for wrapping
> target_link_libraries.
> STYLE: Fix indentation in itkMINCTransformIOFactory.cxx.
> COMP: Fix MINCTransformIO factory registration.
> COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with Emscripten-1.
> COMP: Remove unknown doxygen command in AnisotropicDiffusionLBR.
> BUG: Initialize mutex for 32 bit AtomicInt.
> ENH: Use CastXML binaries when building with x86_64 Linux.
> STYLE: Rename gccxml -> castxml in {idx,igenerator}.py.
> COMP: Disable the gold linker for static builds on Ubuntu 14.04.
> ENH: Use Windows binaries for CastXML.
> ENH: Add better scoping in igenerator.py.
> BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja + MSVC.
> BUG: LevelSetsv4 used signed char instead of char.
> ENH: Add better scoping to idx.py.
> COMP: Define newSize and oldSize in VariableLengthVector.
> STYLE: Use prefix increment operator in ImageBase.
> DOC: Correct spelling of Continuous.
> ENH: Add more progress information to IterativeClosestPoint2.
> BUG: Build BridgeNumPy with Visual Studio.
> ENH: Add ITKModuleExternal.cmake
> COMP: Wrap Image< bool, D > for FlatStructuringElement.
> BUG: Use CastXML binary built in Release.
> BUG: ContinuousIndex should not be templated over TCoordRep.
> COMP: Set CMP0054 to new.
> COMP: Address line length too long for Software Guide.
> COMP: Fix CannyEdgeDetectionImageFilter.cxx types.
> BUG: Support Python 3 wrapping module initialization.
> BUG: Update itkTemplate.py for Python 3.
> BUG: Update itkExtras.py for Python 3.
> BUG: Prevent Python callback addition recursion.
> BUG: Fix test scripts for Python 3.
> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
> ENH: Allow projects to build against an external module.
> ENH: Replace CABLE_CONFIGURATION with ITK_WRAPPING_PARSER.
> ENH: Rename _cable_ to _wrappers_.
> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
> BUG: Define ITK_WRAPPING_PARSER when wrapping.
> COMP: Do not use C++11 alignas in itkAlignedTypedef.
> ENH: Bump CMakeLists.txt version to 4.8.1.
> BUG: Pass the CMAKE_CXX_FLAGS to castxml.
> ENH: Bump CastXML version to 2015-30-29.
> ENH: Bump LLVM / Clang to 3.7.0.
> COMP: Avoid itklibminc linking with ITK_USE_SYSTEM_HDF5.
> COMP: Add missing ITKIOImageBase dependency for ITKTransformMINC.
> COMP: Use itkSimpleNewMacro in ThreadedIteratorRangePartitionerTest.
> ENH: Add wrapping support for building modules externally.
> BUG: Fix KWStyle test paths when building a module externally.
> ENH: Add Cuberille Remote module.
> COMP: Remove carriage returns from Cuberille remote.
> COMP: Remove unused argument in ConditionVariableNoThreads.
> DOC: Correct spelling of Continuous.
> ENH: Bump the MinimalPathExtraction Remote to 2015-10-20.
> COMP: Fix KernelTransform SetFixedParameters argument type.
> STYLE: Use prefix increment operator in ImageBase.
> COMP: Use ITK's pygccxml by correctly setting up the sys.path
> Revert "COMP: Put vnl_export.h in the list of sources so it gets
> installed."
> BUG: Revert "BUG: ConvertLabelMap with different LabelMapTypes"
> ENH: Marking wrapping CMake configuration variables as advanced.
> STYLE: Rename CASTXML to CASTXML_EXECUTABLE.
> COMP: Non-virtual copy attribute members in LabelMap cannot have
> override.
> COMP: Add wrapping for AdaptiveHistogramEqualizationImageFilter.
> COMP: Add itkMacro.h to itkPromoteType.h for ITK_EXCEPT.
> ENH: Remove CMake version check in ITKModuleHeaderTest.cmake
> BUG: Improve KWStyle ExternalProject utilization.
> ENH: Remove old KWStyle build script.
> COMP: Address VariableLengthVector Doxygen rhs @param not found.
> ENH: Rename WRAPPING_LIBRARY_GROUPS to WRAPPING_SUBMODULE_ORDER.
> ENH: Install Python bindings into site-packages.
> ENH: Improve readability of Python site-packages path detection.
> COMP: DiscreteGaussianDerivativeImageFilter unsigned expression
> warning.
> BUG: ITKCommon publically depends on ITKDoubleConversion.
> COMP: Improve scoping in CovariantVectorGeometryTest.
> ENH: Improves names and export of module dependencies.
> STYLE: Improve namespace bracket style in itkIsConvertible.
> COMP: Set CMP0054 to new.
> BUG: Remove unused wrapping files.
> BUG: Do install install wrapping development files.
> ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.
> BUG: Remove duplicate inclusion of wrapping submodules.
> COMP: Do not use C++ style comments for Doxygen cond.
> BUG: Fix detection of the gold linker.
> BUG: Update Python package installation locations.
> ENH: Bump CMakeLists.txt version to 4.8.2.
> ENH: Change BUILD_EXAMPLES default to OFF.
> BUG: Use 'from itk import ITKCommon' in module2module test.
> COMP: Link to VTK Python when built with Kits support.
> BUG: Install itk_minc2.h header.
> COMP: ITKIOMINC has a public dependency on ITKIOImageBase.
>
> Michka Popoff (9):
> ENH: Update to swig 3.0.7
> ENH: Do not link against specific Python library on OS X
> COMP: Fix wrapping warnings when building with ITK_WRAP_IMAGE_DIMS=2
> COMP: Add missing wrapping for TransformBase
> COMP: Use ITK's pygccxml by correctly setting up the sys.path
> COMP: Disable incompatible modules when using Python 3 wrapping
> COMP: Move MovingHistogramImageFilterBase wrapping to
> ImageFilterBase module
> COMP: Disable incompatible modules when using Python 3 wrapping
> ENH: Allow operations on Indexes and Offsets in Python
>
> Mikhail Isakov (1):
> BUG: DiffusionTensor3DReconstruction segfault if no baseline image
>
> Nick Tustison (5):
> BUG: Set a default b-spline epsilon.
> ENH: Adding testing for closed loop.
> BUG: Updating B-spline classes with the same epsilon strategy.
> PERF: Switch vnl_vectors for fixed arrays.
> ENH: Point-set registration with time-varying B-spline.
>
> Olivier Commowick (3):
> BUG: Correct discrepancy in tridiagonal reduction wrt VNL eigen system
> BUG: Correct under/overflows in vnl_math_hypot (taken from pythag
> from V3P)
> BUG: Switch eigenvalues computation to double
>
> Pablo Hernandez-Cerdan (2):
> ENH: Help class for itkFlatStructuringElement with constructor from
> images.
> COMP: Fix test errors and warnings in FlatStructuringElement.
>
> Seun Odutola (1):
> COMP: Fixed name clash with Apple header (check Macro), renamed
> check to Check
>
> Shawn Waldon (1):
> COMP: Set target OS X version in environment for tools using compiler
>
> Simon Alexander (1):
> BUG: incorrect closest point computation
>
> Tobias Wood (2):
> BUG: LBFGSB was printing messages even with debug switched off.
> BUG: Removed an unguarded print statement.
>
> Vladimir S. FONOV (9):
> BUG: Missing ITKIOMINC_EXPORT on __Private()
> COMP: Changing the order of HDF5 library components
> COMP: Splitting up IOMINC module into two parts: MINC and Transform
> STYLE: updated comments to properly reference LIBMINC
> ENH: Add script to merge upstream MINC as a subtree
> MINC 2015-07-23 (c033d431)
> COMP: Update MINC CMake code
> MINC 2015-08-18 (6d7e3ba8)
> MINC 2015-09-13 (95cd5374)
>
> Xiaoxiao Liu (1):
> DOC: update email address for xiaoxiao.
>
> Zach Williamson (10):
> BUG: Use correct libraries for ImageFusion tests
> ENH: Consolidate Library Dependencies
> COMP: Add a missing link to Review module
> COMP: Use correct linking macro in DCMTK
> BUG: Use correct libraries for TestKernel tests
> COMP: Fix inconsistant naming of GPUPDEDeformableRegistration
> ENH: Use new linking system macros
> PERF: Avoid searching private dependencies for include directories
> COMP: Recover missing dependencies
> ENH: use new linking macros in Filtering module
>
>
>
> -----------------------------------------------------
> Errors or omissions? Please fix them here:
>
>
> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit
> _____________________________________
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>
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