[ITK-users] [ANN] ITK 4.9 Release Candidate 3 is ready for testing!
Matt McCormick
matt.mccormick at kitware.com
Tue Jan 5 14:55:10 EST 2016
Excellent!
Thanks for the patches and feedback!
On Mon, Jan 4, 2016 at 7:56 PM, Simon Alexander <skalexander at gmail.com> wrote:
> Thanks!
>
> Clean build and test on my machine this time, show's green on the dash for
> 4th.
>
> On Tue, 22 Dec 2015 at 15:57 Matt McCormick <matt.mccormick at kitware.com>
> wrote:
>>
>> On behalf of the Insight Toolkit community, we are proud to announce
>> that ITK 4.9 release candidate 3 has been tagged and is available for
>> testing! Please take this opportunity to test the new features in the
>> release candidate.
>>
>>
>> To obtain the source code,
>>
>> git clone http://itk.org/ITK.git
>> cd ITK
>> git checkout -q --detach v4.9rc03
>>
>> For more details, please see the Git documentation [1].
>>
>>
>> A few selected highlights for this release:
>>
>> * New Remote modules: the Cuberille module for smooth generation of
>> meshes from binary segmentation images, and the
>> AnisotropicDiffusionLBR module improved edge-preserving smoothing.
>> * Build your own ITK module outside the source tree, add continuous
>> integration testing on GitHub, and easily add Python wrapping for your
>> C++ algorithms.
>> * Python wrapping, including Python 3, builds faster with a more
>> standard installation
>> * Improved performance of itk::Image::GetPixel and operations on
>> itk::VariableLengthVector’s
>> * Generate a FlatStructuringElement from an image
>> * Point-set registration with time-varying B-splines
>> * Module dependencies can now be specified as public / private / compile /
>> test
>>
>>
>> Please test the release candidate and share your experiences on the
>> mailing list, issue tracker, and Gerrit Code Review. The new module
>> dependency specification mechanism may unearth missing dependencies
>> for projects that use ITK COMPONENTS with the CMake find_package
>> command.
>>
>>
>> An Experimental build, which demonstrates how the test suite performs
>> on your local build system, can be submitted to the dashboard [2]
>> with:
>>
>> mkdir ../ITK-build
>> cd ../ITK-build
>> cmake ../ITK
>> ctest -j 4 -M Experimental -T Configure -T Build -T Test -T Submit
>>
>> Visual Studio builds must also add “-C Release” to the ctest command.
>>
>> Notify the mailing list if there are any unexpected failures. Testing
>> your own applications against the RC is also appreciated.
>>
>>
>> Congratulations and well done to the 43 contributors to this release.
>> We would especially like to recognize the new contributors: Mikhail
>> Isakov, Betsy McPhail, Luc Hermitte, Shawn Waldon, Tobias Wood,
>> Ricardo Ortiz, Sreekanth Arikatla, Hyun Jae Kang, Lucas Gandel, Adam
>> Snyder, Junjie Bai, Seun Odutola, Abhishek Tiwari, Eugene Prilepin,
>> Zach Williamson, Alexander Leinoff, Alexis Girault, Laurentiu Nicola,
>> Floris Berendsen, Max Smolens, and Pablo Hernandez-Cerdan.
>>
>> Many community members stepped up to contribute fixes for this release
>> candidate. To allow testing and accommodate the upcoming holiday, the
>> final release is re-scheduled for mid-January.
>>
>>
>> Known issues in this release candidate, to be fixed before the final
>> release:
>> * TransformReadWriteTest fails on Mac OSX with shared libraries.
>> * Mac OSX 10.6 has build errors.
>>
>>
>> [1] http://www.itk.org/Wiki/ITK/Git
>>
>> [2] http://open.cdash.org/index.php?project=Insight
>>
>>
>>
>> New Features
>> ---------------------
>>
>> * Wrapping improvements
>> * Python 3 supported
>> * Wrapping builds much faster due to CastXML binaries
>> * LandmarkBasedTransformInitializer now wrapped
>> * NumPy bridge with VisualStudio
>> * Wrapping for the MinimalPathExtraction module
>> * Wrapping is now installed into Python’s site-packages directory
>> in the “itk” package
>> * Wrapping package size is decreased
>> * Better package portability on Mac OSX
>>
>> * New Remote Modules
>> * Cuberille
>> * Insight Journal Article: http://hdl.handle.net/10380/3186
>> * AnisotropicDiffusionLBR
>> * Insight Journal Article: http://hdl.handle.net/10380/3505
>> * Web browser reproducibility:
>> http://www.kitware.com/blog/home/post/942
>>
>> * Core Improvements
>> * External Modules can now be developed outside of the ITK source
>> tree and on GitHub
>> * Details: http://www.kitware.com/blog/home/post/997
>> * New utilities in itk::Math:
>> * AlmostEquals
>> * NotAlmostEquals
>> * ExactlyEquals
>> * NotExactlyEquals
>> * New itk::NumericTraits
>> * IsInteger
>> * IsSigned
>> * Improved C++11 support
>> * New ITK_DELETE_FUNCTION macro for “=delete”
>> * New ITK_NOEXCEPT macro for the “noexcept” keyword
>> * Improved capabilities of itk::ResourceProbe and
>> itk::ResourceProbesCollectorBase
>> * Improve numerical stability in VNL eigen system estimation
>> * itksys_ios:: and itksys_stl:: have been remove (use std::)
>>
>> * Filtering Improvements
>> * Generate a FlatStructuringElement from an image
>> * WarpImageFilter support VectorImage’s
>> * ConvertLabelMap supports different LabelMap types
>> * ImageToPathFilter moved from the ITKReview to the ITKPath module
>> * itk::MovingHistogramImageFilter moved to the ITKImageFilterBase
>> module
>>
>> * Registration Improvements
>> * Point-set registration with time-varying B-splines
>>
>> * Build Improvements
>> * Module dependencies can now be specified as public / private /
>> compile / test
>> * BUILD_EXAMPLES CMake option is now OFF by default
>> * Option to export all library symbols on Windows:
>> * Details: http://www.kitware.com/blog/home/post/939
>> * Expat third party library is now name mangled
>> * Many more modules can be built as shared libraries
>> * KWStyle is automatically built and configured when tests are built
>>
>> * Performance Improvements
>> * New MetaProgrammingLibrary namespace (itk::mpl) holds members for
>> metaprogramming
>> * itk::mpl::{TrueType,FalseType}
>> * itk::mpl::{If,Not,And,Or,Xor}
>> * itk::mpl::EnableIf
>> * itk::mpl::IsBaseOf
>> * itk::mpl::IsConvertible
>> * itk::mpl::IsNumber
>> * itk::mpl::IsSame
>> * itk::mpl::PromoteType
>> * Image::GetPixel performance improvements
>> * Many itk::VariableLengthVector performance improvements
>> * AdaptiveHistogramEqualization uses a moving histogram
>> * WarpImageFilter performance improvements
>>
>> * Documentation Improvements
>> * Updates to the Software Guide, Doxygen, Wiki and Sphinx Examples
>> * ITK Software Guide improvements
>> * How to use Python wrapping
>> * How to create an ITK module
>> * Improvements to segmentation examples
>> * Expanded Canny edge detection example
>> * Expanded tree container example
>>
>> * Third Party Library Updates
>> * FFTW updated to latest upstream
>> * Build with recent OpenCV 2 and 3
>> * Build with the latest VTK
>> * PNG update to the latest upstream
>> * GDCM updated to the latest upstream
>> * KWSys updated to the latest upstream
>> * MINC updated to the latest upstream
>> * SWIG updated to the latest upstream
>> * Third party PNG and MINC are now Git subtrees
>>
>> * Style improvements -- ITK gets more stylish with every release!
>> * Private copy constructors and operator= use ITK_DELETE_FUNCTION
>>
>> * Improved code coverage -- we are at 84.9%!
>>
>> * *Lots* of important bug fixes
>>
>> * And much more! See details in the log below.
>>
>>
>> Changes from v4.9rc02..v4.9rc03
>> ------------------------------------------------
>>
>> Alexis Girault (1):
>> BUG: Implement SetAutoMinimumMaximum in
>> itkScalarImageToHistogramGenerator
>>
>> Bill Lorensen (1):
>> BUG: nifti_read_subregion_image was leaking file pointers
>>
>> Brad King (7):
>> ENH: Teach ITK module macros to support independent header-only
>> modules
>> ENH: Add script to import KWIML library source code
>> ENH: Add `ITKKWIML` module to provide external KWIML library
>> ENH: Port TIFF integer types from KWSys to KWIML
>> ENH: Port LSM integer types from KWSys to KWIML
>> ENH: Port itkIntTypes.h from KWSys to KWIML
>> ENH: Drop KWSys FundamentalType component
>>
>> Bradley Lowekamp (1):
>> ENH: Add option to choose scheme for git download
>>
>> Davis Vigneault (1):
>> STYLE: Use cstdlib return macros in ITK examples
>>
>> Dženan Zukić (3):
>> BUG: do not pass 0,0,0 to Versor.Set()
>> STYLE: Removing the unused NeighborhoodRadius property
>> ENH: Write out transform in DeformableRegistration15
>>
>> Gert Wollny (1):
>> BUG: Remove double-conversion from public interface, use system.
>>
>> Hyun Jae Kang (8):
>> ENH: Use a data struct to export the system information of a probe.
>> ENH: Create a test for the SpawnThread function ( ITK-3317)
>> STYLE: Remove an unnecessary file (-w) from source code
>> BUG: Fixed the failed case of itkStdStreamStateSaveTest on OS X 10.8
>> BUG: Fixed the failed test case of itkThreadPoolTest on OS X 10.8
>> BUG: Fixed a failed test of ITKDistanceMapTestDriver
>> BUG: Fixed the failed test VideoSourceTest
>> PERF: Improve the performance of a test of
>> ITKRegistrationMethodsv4TestDriver
>> COMP: Fixed the compiler error of
>> itkDisplacementFieldToBSplineImageFilterTest
>>
>> Jean-Christophe Fillion-Robin (25):
>> BUG: Build ITKIOTransformHDF5 as shared library. See #3393
>> BUG: Build ITKIOTransformMINC as shared library. See #3393
>> BUG: Build ITKIOTransformMatlab as shared library. See #3393
>> BUG: Build ITKIOTransformInsightLegacy as shared library. See #3393
>> STYLE: TransformIOFactory: Remove obsolete declaration. See #3393
>> COMP: TransformIOFactory: Add missing ctor/dtor from hxx file. See
>> #3393
>> COMP: TransformFileWriter: Remove method "OpenStream()" without
>> definition
>> COMP: TransformFileReaderTemplate: Remove undefined method
>> "CreateTransform()"
>> ENH: Update ITKIOPhilipsREC to allow static initialization. See
>> #3393
>> ENH: Update ITKIOTransformMINC to allow static initialization. See
>> #3393
>> COMP: MINC: Fix VS2008 "unknown round" build error. See #3393
>> COMP: MINC: Fix VS2008 "unknown arpa/inet.h" build error. See #3393
>> COMP: Configure ENABLE_SHARED into <ModuleName>.cmake file. See
>> #3393
>> COMP: Fix configuration of IOFactory header. See #3393
>> STYLE: UseITK: Removed redundant code setting ImageIO factory
>> name. See #3393
>> STYLE: UseITK: Re-factor introducing
>> _configure_IOFactoryRegisterManager
>> STYLE: UseITK: Set TransformIO factory and module name using
>> convention.
>> BUG: Ensure Image IO factories are registered once. See #3393
>> BUG: Ensure Transform IO factories are registered once.
>> COMP: ITKIOXML: Fix VS11 "already defined std::string" link
>> error. See #3393
>> BUG: TransformIO: Implement explicit template instantiation
>> using "extern".
>> COMP: TransformIO: Fix VS build errors removing extra EXPORT
>> COMP: TransformIO: Handle compiler not supporting "pragma
>> diagnostic".
>> COMP: TransformIO: TransformFile(Reader|Writer) still need to be
>> exported.
>> COMP: TransformIO: Fix explicit instantiation approach
>>
>> Johan Andruejol (1):
>> ENH: Add ITK_RUNTIME_LIBRARY_DIRS for external projects
>>
>> KWIML Upstream (1):
>> KWIML 2015-12-09 (43f9f8d0)
>>
>> Lucas Gandel (1):
>> BUG: PhysicsBasedNonRigidRegistrationMethod test failure on Debian
>> 32bit
>>
>> Matthew McCormick (16):
>> COMP: Fix PointDimension reference in AzimuthElevationToCartesian
>> test.
>> STYLE: Improve scoping in AzimuthElevationToCartesian test.
>> STYLE: Explicitly mark the ProcessObject methods virtual in
>> SignedMaurer.
>> BUG: Do not try to install targets that do not exist when
>> building externally.
>> BUG: ITKIOMeta needs a public dependency on ITKMetaIO.
>> COMP: Update LesionSizingToolkit for external build and style
>> test failures.
>> BUG: Add CMake OpenCV export code to ITKVideoBridgeOpenCV.
>> COMP: Improve compatibility with OpenCV 3.
>> DOC: Fix class references in StatisticsLabelMapFilter.
>> STYLE: Improved readability of
>> itkStatisticsUniqueLabelMapFilterTest1.
>> DOC: Correct ReverseOrdering description in
>> ShapeUniqueLabelMapFilter.
>> STYLE: Add own copy of GenerateExportHeader
>> COMP: Create _TEMPLATE_EXPORT macros.
>> COMP: TransformIOBaseTemplate must be explicitly instantiated.
>> BUG: Do not use dynamic_cast for DisplacementFieldType in HDF5 test.
>> COMP: Do not use string(MAKE_C_IDENTIFIER with CMake < 2.8.12
>>
>> Max Smolens (1):
>> BUG: VoronoiSegmentationRGBImageFilter: add pixel dimension check
>>
>> Mikhail Isakov (1):
>> DOC: correction in DiffusionTensor3D Reconstruction
>>
>> Ricardo Ortiz (1):
>> BUG: Set itkBinaryImageTo*LabelMapFilter foreground/background
>> values
>>
>> Seun Odutola (1):
>> BUG: absolute value of tolerance taken to cater for negative spacing
>>
>> Shawn Waldon (1):
>> COMP: OSX set deployment target when building fftw
>>
>> Simon Alexander (4):
>> STYLE: Change to make git bash on windows happy with the function
>> name
>> COMP: fixes for visual studio 2015update1 x86 in release mode
>> COMP: fixes for visual studio 2015update1 x86 in release mode
>> COMP: fixes for visual studio 2015update1 x86 in release mode
>>
>> Sreekanth Arikatla (2):
>> BUG: Resolved const correctness in itkMatrix.h
>> ENH: Fixes the symmetry of AzimuthElevationToCartesianTransform
>> and adds tests
>>
>>
>> Changes from v4.9rc01..v4.9rc02
>> ------------------------------------------------
>>
>> Bill Lorensen (1):
>> BUG: Valgrind detected an invalid read
>>
>> Davis Vigneault (1):
>> STYLE: Address some warnings when running cppcheck
>>
>> Hyun Jae Kang (2):
>> COMP: Fixed a warning message of data-conversion on VS14
>> COMP: Update KWStyle to remove format-string warning message
>>
>> Matthew McCormick (3):
>> DOC: Remove invalid wrapping example.
>> BUG: Wrap AdaptiveEqualizationHistogram.
>> COMP: Ignore Doxygen endcond warning in itkIsConvertible.h.
>>
>> Seun Odutola (1):
>> COMP: Corrected minc2.h path installation from libsrc2/minc2.h to
>> minc2.h
>>
>> Ziv Yaniv (2):
>> BUG: Affine transformation was estimated without sufficient
>> number of points.
>> BUG: fixed BSpline initializer crash when reference image not set.
>>
>>
>> Changes from v4.8.0..v4.9rc01
>> --------------------------------------------
>>
>> Abhishek Tiwari (1):
>> BUG: "tmpImageIndex" not initialized to 0.
>>
>> Adam Snyder (1):
>> PERF: Reworked MMI Threading using a per-thread buffer
>>
>> Alexander Leinoff (6):
>> ENH: Adds IsInteger and IsSigned to NumericTraits.
>> COMP: Doxygen itkMath.h 'OneValue()' could not be resolved.
>> ENH: Adds ExactlyEquals and NotExactlyEquals functions to itkMath.h
>> COMP: Removes floating-point equality checks
>> ENH: COMP: Adds support for complex values to Math::AlmostEquals
>> ENH: Updates fftw dependency
>>
>> Arnaud Gelas (5):
>> COMP: fix warning (unused local typedef)
>> COMP: simplify ITKVideoBridgeOpenCV dependency
>> DOC: add doxgen documentation for BinaryImageToLevelSetImageAdaptor
>> ENH: add tests to exercise itk::ThreadedIteratorRangePartitioner
>> COMP: fix compilation error with OpenCV2 and OpenCV3
>>
>> Betsy McPhail (1):
>> BUG: Improve buffer alignment in OctreeNode .
>>
>> Bill Hoffman (2):
>> ENH: Use new CMake Windows export symbol dll feature.
>> COMP: Put vnl_export.h in the list of sources so it gets installed.
>>
>> Bill Lorensen (4):
>> COMP: VTkGlue linker errors
>> BUG: Inappropriate use of AlmostEquals
>> ENH: Bump tag for wiki examples
>> ENH: Better layout strategy
>>
>> Brad King (3):
>> ENH: Remove use of include <itksys/ios/*> and itksys_ios::*
>> ENH: Remove use of include <itksys/stl/*> and itksys_stl::*
>> ENH: Update CMake Policy settings in Testing/TestExternal project
>>
>> Bradley Lowekamp (31):
>> BUG: Avoid null deference in PrintSelf with default construction
>> ENH: Enable base classes for templates of landmark initializer
>> STYLE: Use "Swap" for ITK member name
>> BUG: Demonstrate Eigen analysis failure
>> BUG: Fix computation of Eigen analysis
>> ENH: Update DiscreteHessianGaussian Test baseline
>> ENH: Correctly demonstrate float point Eigen failure
>> ENH: compile vnl_math_hypot, and use at least double
>> ENH: Adding initial update script from used libpng version.
>> ENH: removing non-subtree files for itkpng
>> ENH: Ported ITK changes for building to subtree merged code
>> ENH: Update libpng update script for v1.6.9
>> BUG: Use ParameterValueType for computation of landmark affine
>> ENH: Wrap LandmarkBasedTransformInitializer
>> BUG: Avoid potential exception in itk::Object::UnRegister
>> ENH: Update itkpng zlib, configuration, and rename
>> ENH: Update itkpng name mangling
>> BUG: Use const pointer in Set method for constant ReferenceImage ivar
>> BUG: Increase tolerance for PhysicsBasedNonRigidRegistrationMethod
>> BUG: Demonstrate side effect on registration due to BSplineScatter
>> change
>> ENH: Move MovingHistogramImageFilter base classes to ImageFilterBase
>> BUG: Avoid potential exception in itk::Object::UnRegister
>> BUG: Avoid null deference in PrintSelf with default construction
>> BUG: Use const pointer in Set method for constant ReferenceImage ivar
>> ENH: Optimize AdaptiveHistogramEqualization with MovingHistogram base
>> COMP: address sign unsigned comparison warning
>> COMP: Address signed unsigned comparison warning
>> COMP: Address unused member variable and methods in anonymous ns
>> BUG: Fix segfault when with empty IsolatedWatershed Threshold range
>> BUG: Adjust intensity tolerance for PhysicsBasedNonRigid test
>> BUG: Reduce number of targets with MSVC
>>
>> Davis Vigneault (7):
>> DOC: Minor improvements to segmentation examples.
>> DOC: Expanded Canny Edge Detection Example
>> DOC: Expanded TreeContainer Example
>> COMP: Warnings in itkVTKImageExport when compiling with c++11
>> COMP: Warnings in FFTW Classes when compiling with c++11
>> COMP: Update Git Tag for Subdivision Module
>> COMP: Warnings in FFTW Classes when compiling with c++11
>>
>> Dženan Zukić (1):
>> STYLE: better formatting of the "usage" message
>>
>> Eugene Prilepin (1):
>> BUG: Fix a template name formation in python wrappings
>>
>> Floris Berendsen (1):
>> STYLE: Improve naming conventions in comments.
>>
>> Hans Johnson (29):
>> STYLE: Instrument for FixedParameters typedef
>> BUG: Demonstrate DisplacementTransformFailure
>> BUG: FixedParameters should be double precision
>> STYLE: Minor code style issues for MGHIO
>> COMP: Update to version for WikiExamples
>> ENH: Update Sphinx for ITK 4.8.0
>> ENH: Update MGHIO to be shared lib
>> ENH: Provide consistent floating point comparisons
>> BUG: Fix MGHIO to fix write failures
>> PERF: Remove floating point as sentinal value
>> COMP: Const correctness needs to be maintained
>> BUG: Preserve backwards compatibility
>> DOC: Provide consistent naming in comments
>> ENH: Conversion between transform type tolerance
>> STYLE: Prefer initialization to assignment
>> ENH: Missing ITK_OVERRIDE
>> COMP: Need to propagate ITKGDCM
>> COMP: Need to propagate ITKGDCM
>> COMP: Add missing ITK_OVERRIDE
>> STYLE: Minor code style issues for MGHIO
>> COMP: Update to version for WikiExamples
>> ENH: Update Sphinx for ITK 4.8.0
>> ENH: Update MGHIO to be shared lib
>> BUG: Fix MGHIO to fix write failures
>> ENH: C++11 allows for rigorous =delete
>> COMP: Remove unnecessary failing assert test
>> ENH: Ignore internal files for the Clion editor
>> COMP: Fix VNL compilation for wider C++11 support
>> BUG: In configuration test need to mirror code
>>
>> Hyun Jae Kang (27):
>> BUG: Remove std::cout calls from class
>> BUG: Avoid an unexpected output of static_cast
>> BUG: Update python example codes for ImageRegistration
>> BUG: Retrieve the missed wrap file
>> BUG: itkVTKImageIO class does not handle blank lines in VTK file
>> header.
>> BUG: Fix HDF5 CMake configuration with VS2015
>> BUG: Fix a compilation issue on ITK4 with FFTW and shared libraries
>> BUG: Fixed older XCode linking error
>> ENH: Use CastXML binaries when building with x86_64 Mac OS X
>> BUG: Remove std::cout calls from class
>> BUG: itkVTKImageIO class does not handle blank lines in VTK file
>> header.
>> BUG: Fixed older XCode linking error
>> ENH: Add automatic KWStyle build and configuration setup
>> COMP: KWStyle shadow, format-nonliteral and autological-compare
>> warning.
>> COMP: Fixed the warning messages from itkGPU Module
>> COMP: Fixed a warning message of unused-private-field
>> COMP: Apply latest version of KWStyle
>> COMP: Update KWStyle to fix its additional warning messages
>> COMP: Update KWStyle to fix its additional warning messages
>> COMP: Fix data-conversion warning messages on Windows
>> ENH: Update itkResourceProbe to calculate statistical data
>> COMP: Fix data-conversion warning messages on VS14
>> COMP: Fixed 'std::sqrt' : ambiguous call to overloaded function
>> ENH: Update the Report() function of itkResourceProbesCollectorBase
>> COMP: Fix data-conversion warning message on itkResourceProbe
>> COMP: Fix additional warning messages of KWStyle
>> COMP: Fix data-conversion warning messages
>>
>> Jon Haitz Legarreta (6):
>> ENH: Add test for itkStatisticsUniqueLabelMapFilter
>> BUG: Fix compilation issues for StatisticsUniqueLabelMapFilterTest
>> BUG: Fix comparison issues for itkStatisticsUniqueLabelMapFilter
>> BUG: Test for StatisticsUniqueLabelMapFilter stability
>> ENH: Add test for itkParametricStpaceToImageSpaceFilter
>> ENH: Improve code coverage for
>> itkParametricSpaceToImageSpaceMeshFilter
>>
>> Julien Michel (1):
>> ENH: Support of VectorImage as template parameters for
>> WarpImageFilter
>>
>> Junjie Bai (2):
>> BUG: ConvertLabelMap with different LabelMapTypes
>> BUG: LabelObject CopyAttribute support different LabelObject type
>>
>> KWSys Robot (4):
>> KWSys 2015-07-10 (c9336bcf)
>> KWSys 2015-07-30 (f63febb7)
>> KWSys 2015-08-24 (cdaf522c)
>> KWSys 2015-08-28 (dc3fdd7f)
>>
>> LIBPNG Upstream (2):
>> PNG 2009-04-06 (e68f5a36)
>> PNG 2014-02-05 (3e753eb8)
>>
>> Laurentiu Nicola (2):
>> PERF: Avoid temporary smartptr in ProcessObject::GetInput
>> PERF: Optimize WarpImageFilter by avoiding refcount bouncing
>>
>> Luc Hermitte (8):
>> PERF: itk::Image::GetPixel() performance improvment.
>> PERF: Performance enhancements on VariableLengthVectors 1/...
>> ENH: Dependencies on itkVariableLengthVector.h reduced
>> BUG: Error in VariableLengthVector Unit Tests
>> PERF: Performance enhancements on VLV 2/...
>> PERF: Performances enhancements on VLV 3/...
>> COMP: Fix signed/unsigned warnings
>> BUG: std::copy/fill on empty VLV
>>
>> Lucas Gandel (4):
>> ENH: Move ImageToPathFilter from ITKReview to ITKPath module.
>> BUG: Fixing ImageToPathFilter wrapping call from Review Module
>> STYLE: Fix KWStyle dashboard errors
>> BUG: Fix external module BUILD_SHARED_LIBS status
>>
>> Mathieu Malaterre (1):
>> BUG: Name mangle the included expat third party library.
>>
>> Matthew McCormick (94):
>> ENH: Change itkSystemInformationTest to itkCMakeConfigurationTest.
>> ENH: Add AnisotropicDiffusionLBR Remote Module.
>> ENH: Bump ITK version to 4.9.0.
>> BUG: Remove std::cout calls from classes.
>> COMP: Remove unused argument in ConditionVariableNoThreads.
>> BUG: Implement UpdateLargestPossibleRegion for ImageToVTKImageFilter.
>> COMP: Add link interface specification for wrapping
>> target_link_libraries.
>> STYLE: Fix indentation in itkMINCTransformIOFactory.cxx.
>> COMP: Fix MINCTransformIO factory registration.
>> COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with Emscripten-1.
>> COMP: Remove unknown doxygen command in AnisotropicDiffusionLBR.
>> BUG: Initialize mutex for 32 bit AtomicInt.
>> ENH: Use CastXML binaries when building with x86_64 Linux.
>> STYLE: Rename gccxml -> castxml in {idx,igenerator}.py.
>> COMP: Disable the gold linker for static builds on Ubuntu 14.04.
>> ENH: Use Windows binaries for CastXML.
>> ENH: Add better scoping in igenerator.py.
>> BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja + MSVC.
>> BUG: LevelSetsv4 used signed char instead of char.
>> ENH: Add better scoping to idx.py.
>> COMP: Define newSize and oldSize in VariableLengthVector.
>> STYLE: Use prefix increment operator in ImageBase.
>> DOC: Correct spelling of Continuous.
>> ENH: Add more progress information to IterativeClosestPoint2.
>> BUG: Build BridgeNumPy with Visual Studio.
>> ENH: Add ITKModuleExternal.cmake
>> COMP: Wrap Image< bool, D > for FlatStructuringElement.
>> BUG: Use CastXML binary built in Release.
>> BUG: ContinuousIndex should not be templated over TCoordRep.
>> COMP: Set CMP0054 to new.
>> COMP: Address line length too long for Software Guide.
>> COMP: Fix CannyEdgeDetectionImageFilter.cxx types.
>> BUG: Support Python 3 wrapping module initialization.
>> BUG: Update itkTemplate.py for Python 3.
>> BUG: Update itkExtras.py for Python 3.
>> BUG: Prevent Python callback addition recursion.
>> BUG: Fix test scripts for Python 3.
>> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>> ENH: Allow projects to build against an external module.
>> ENH: Replace CABLE_CONFIGURATION with ITK_WRAPPING_PARSER.
>> ENH: Rename _cable_ to _wrappers_.
>> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>> BUG: Define ITK_WRAPPING_PARSER when wrapping.
>> COMP: Do not use C++11 alignas in itkAlignedTypedef.
>> ENH: Bump CMakeLists.txt version to 4.8.1.
>> BUG: Pass the CMAKE_CXX_FLAGS to castxml.
>> ENH: Bump CastXML version to 2015-30-29.
>> ENH: Bump LLVM / Clang to 3.7.0.
>> COMP: Avoid itklibminc linking with ITK_USE_SYSTEM_HDF5.
>> COMP: Add missing ITKIOImageBase dependency for ITKTransformMINC.
>> COMP: Use itkSimpleNewMacro in ThreadedIteratorRangePartitionerTest.
>> ENH: Add wrapping support for building modules externally.
>> BUG: Fix KWStyle test paths when building a module externally.
>> ENH: Add Cuberille Remote module.
>> COMP: Remove carriage returns from Cuberille remote.
>> COMP: Remove unused argument in ConditionVariableNoThreads.
>> DOC: Correct spelling of Continuous.
>> ENH: Bump the MinimalPathExtraction Remote to 2015-10-20.
>> COMP: Fix KernelTransform SetFixedParameters argument type.
>> STYLE: Use prefix increment operator in ImageBase.
>> COMP: Use ITK's pygccxml by correctly setting up the sys.path
>> Revert "COMP: Put vnl_export.h in the list of sources so it gets
>> installed."
>> BUG: Revert "BUG: ConvertLabelMap with different LabelMapTypes"
>> ENH: Marking wrapping CMake configuration variables as advanced.
>> STYLE: Rename CASTXML to CASTXML_EXECUTABLE.
>> COMP: Non-virtual copy attribute members in LabelMap cannot have
>> override.
>> COMP: Add wrapping for AdaptiveHistogramEqualizationImageFilter.
>> COMP: Add itkMacro.h to itkPromoteType.h for ITK_EXCEPT.
>> ENH: Remove CMake version check in ITKModuleHeaderTest.cmake
>> BUG: Improve KWStyle ExternalProject utilization.
>> ENH: Remove old KWStyle build script.
>> COMP: Address VariableLengthVector Doxygen rhs @param not found.
>> ENH: Rename WRAPPING_LIBRARY_GROUPS to WRAPPING_SUBMODULE_ORDER.
>> ENH: Install Python bindings into site-packages.
>> ENH: Improve readability of Python site-packages path detection.
>> COMP: DiscreteGaussianDerivativeImageFilter unsigned expression
>> warning.
>> BUG: ITKCommon publically depends on ITKDoubleConversion.
>> COMP: Improve scoping in CovariantVectorGeometryTest.
>> ENH: Improves names and export of module dependencies.
>> STYLE: Improve namespace bracket style in itkIsConvertible.
>> COMP: Set CMP0054 to new.
>> BUG: Remove unused wrapping files.
>> BUG: Do install install wrapping development files.
>> ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.
>> BUG: Remove duplicate inclusion of wrapping submodules.
>> COMP: Do not use C++ style comments for Doxygen cond.
>> BUG: Fix detection of the gold linker.
>> BUG: Update Python package installation locations.
>> ENH: Bump CMakeLists.txt version to 4.8.2.
>> ENH: Change BUILD_EXAMPLES default to OFF.
>> BUG: Use 'from itk import ITKCommon' in module2module test.
>> COMP: Link to VTK Python when built with Kits support.
>> BUG: Install itk_minc2.h header.
>> COMP: ITKIOMINC has a public dependency on ITKIOImageBase.
>>
>> Michka Popoff (9):
>> ENH: Update to swig 3.0.7
>> ENH: Do not link against specific Python library on OS X
>> COMP: Fix wrapping warnings when building with ITK_WRAP_IMAGE_DIMS=2
>> COMP: Add missing wrapping for TransformBase
>> COMP: Use ITK's pygccxml by correctly setting up the sys.path
>> COMP: Disable incompatible modules when using Python 3 wrapping
>> COMP: Move MovingHistogramImageFilterBase wrapping to
>> ImageFilterBase module
>> COMP: Disable incompatible modules when using Python 3 wrapping
>> ENH: Allow operations on Indexes and Offsets in Python
>>
>> Mikhail Isakov (1):
>> BUG: DiffusionTensor3DReconstruction segfault if no baseline image
>>
>> Nick Tustison (5):
>> BUG: Set a default b-spline epsilon.
>> ENH: Adding testing for closed loop.
>> BUG: Updating B-spline classes with the same epsilon strategy.
>> PERF: Switch vnl_vectors for fixed arrays.
>> ENH: Point-set registration with time-varying B-spline.
>>
>> Olivier Commowick (3):
>> BUG: Correct discrepancy in tridiagonal reduction wrt VNL eigen
>> system
>> BUG: Correct under/overflows in vnl_math_hypot (taken from pythag
>> from V3P)
>> BUG: Switch eigenvalues computation to double
>>
>> Pablo Hernandez-Cerdan (2):
>> ENH: Help class for itkFlatStructuringElement with constructor from
>> images.
>> COMP: Fix test errors and warnings in FlatStructuringElement.
>>
>> Seun Odutola (1):
>> COMP: Fixed name clash with Apple header (check Macro), renamed
>> check to Check
>>
>> Shawn Waldon (1):
>> COMP: Set target OS X version in environment for tools using compiler
>>
>> Simon Alexander (1):
>> BUG: incorrect closest point computation
>>
>> Tobias Wood (2):
>> BUG: LBFGSB was printing messages even with debug switched off.
>> BUG: Removed an unguarded print statement.
>>
>> Vladimir S. FONOV (9):
>> BUG: Missing ITKIOMINC_EXPORT on __Private()
>> COMP: Changing the order of HDF5 library components
>> COMP: Splitting up IOMINC module into two parts: MINC and Transform
>> STYLE: updated comments to properly reference LIBMINC
>> ENH: Add script to merge upstream MINC as a subtree
>> MINC 2015-07-23 (c033d431)
>> COMP: Update MINC CMake code
>> MINC 2015-08-18 (6d7e3ba8)
>> MINC 2015-09-13 (95cd5374)
>>
>> Xiaoxiao Liu (1):
>> DOC: update email address for xiaoxiao.
>>
>> Zach Williamson (10):
>> BUG: Use correct libraries for ImageFusion tests
>> ENH: Consolidate Library Dependencies
>> COMP: Add a missing link to Review module
>> COMP: Use correct linking macro in DCMTK
>> BUG: Use correct libraries for TestKernel tests
>> COMP: Fix inconsistant naming of GPUPDEDeformableRegistration
>> ENH: Use new linking system macros
>> PERF: Avoid searching private dependencies for include directories
>> COMP: Recover missing dependencies
>> ENH: use new linking macros in Filtering module
>>
>>
>>
>> -----------------------------------------------------
>> Errors or omissions? Please fix them here:
>>
>>
>> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit
>> _____________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Kitware offers ITK Training Courses, for more information visit:
>> http://www.kitware.com/products/protraining.php
>>
>> Please keep messages on-topic and check the ITK FAQ at:
>> http://www.itk.org/Wiki/ITK_FAQ
>>
>> Follow this link to subscribe/unsubscribe:
>> http://public.kitware.com/mailman/listinfo/insight-users
More information about the Insight-users
mailing list