ITK  5.1.0
Insight Toolkit
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itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType > Class Template Reference

#include <itkFiniteDifferenceSparseImageFilter.h>

+ Inheritance diagram for itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >:
+ Collaboration diagram for itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >:

Classes

struct  FDThreadStruct
 
struct  ThreadRegionType
 

Public Types

using ConstPointer = SmartPointer< const Self >
 
using FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
 
using IndexType = typename SparseOutputImageType::IndexType
 
using InputImageType = typename Superclass::InputImageType
 
using NodeDataType = typename OutputNodeType::NodeDataType
 
using NodeListType = typename SparseOutputImageType::NodeListType
 
using NodeValueType = typename OutputNodeType::NodeValueType
 
using OutputNodeType = typename SparseOutputImageType::NodeType
 
using PixelType = typename Superclass::PixelType
 
using Pointer = SmartPointer< Self >
 
using Self = FiniteDifferenceSparseImageFilter
 
using SizeType = typename SparseOutputImageType::SizeType
 
using SparseFunctionType = FiniteDifferenceSparseImageFunction< SparseOutputImageType >
 
using SparseOutputImageType = typename Superclass::OutputImageType
 
using Superclass = FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >
 
using TimeStepType = typename Superclass::TimeStepType
 
- Public Types inherited from itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >
using ConstPointer = SmartPointer< const Self >
 
using FiniteDifferenceFunctionType = FiniteDifferenceFunction< TSparseOutputImageType >
 
using InputImageType = TInputImageType
 
using InputPixelType = typename TInputImageType ::PixelType
 
using InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType
 
using NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType
 
using OutputImageType = TSparseOutputImageType
 
using OutputPixelType = typename TSparseOutputImageType ::PixelType
 
using OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType
 
using PixelType = OutputPixelType
 
using Pointer = SmartPointer< Self >
 
using RadiusType = typename FiniteDifferenceFunctionType::RadiusType
 
using Self = FiniteDifferenceImageFilter
 
using Superclass = InPlaceImageFilter< TInputImageType, TSparseOutputImageType >
 
using TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType
 
- Public Types inherited from itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImageType
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using OutputImageType = typename Superclass::OutputImageType
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TInputImageType, TSparseOutputImageType >
 
- Public Types inherited from itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImageType
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TSparseOutputImageType >
 
- Public Types inherited from itk::ImageSource< TSparseOutputImageType >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TSparseOutputImageType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual const char * GetNameOfClass () const
 
virtual bool GetPrecomputeFlag () const
 
virtual void SetPrecomputeFlag (bool _arg)
 
void SetSparseFunction (SparseFunctionType *sf)
 
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >
virtual const FiniteDifferenceFunctionType ::PointerGetDifferenceFunction () const
 
virtual const IdentifierTypeGetElapsedIterations () const
 
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
 
virtual void SetNumberOfIterations (IdentifierType _arg)
 
virtual const IdentifierTypeGetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
virtual void SetIsInitialized (bool _arg)
 
virtual bool GetIsInitialized ()
 
void SetStateToUninitialized ()
 
void SetStateToInitialized ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
virtual bool CanRunInPlace () const
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TInputImageType *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TSparseOutputImageType >
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual const float & GetProgress () const
 
void UpdateProgress (float progress)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputInformation ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual void ResetPipeline ()
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
MultiThreaderTypeGetMultiThreader () const
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void PrepareOutputs ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
LightObject::Pointer CreateAnother () const override
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Attributes

static constexpr unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TSparseOutputImageType >
static constexpr unsigned int OutputImageDimension
 

Protected Member Functions

void AllocateUpdateBuffer () override
 
void ApplyUpdate (const TimeStepType &dt) override
 
TimeStepType CalculateChange () override
 
virtual NodeDataType DataConstraint (const NodeDataType &data) const
 
 FiniteDifferenceSparseImageFilter ()
 
ThreadIdType GetSplitRegion (ThreadIdType i, ThreadIdType num, ThreadRegionType &splitRegion)
 
void Initialize () override
 
virtual void PrecalculateChange ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
virtual TimeStepType ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
virtual void ThreadedPrecalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
 ~FiniteDifferenceSparseImageFilter () override=default
 
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >
 FiniteDifferenceImageFilter ()
 
 ~FiniteDifferenceImageFilter () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ApplyUpdate (const TimeStepType &dt)=0
 
virtual void CopyInputToOutput ()=0
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
virtual bool Halt ()
 
virtual bool ThreadedHalt (void *)
 
virtual void InitializeIteration ()
 
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const
 
virtual void SetElapsedIterations (IdentifierType _arg)
 
virtual void PostProcessOutput ()
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >
 InPlaceImageFilter ()=default
 
 ~InPlaceImageFilter () override=default
 
void AllocateOutputs () override
 
void ReleaseInputs () override
 
virtual bool GetRunningInPlace () const
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
 ImageToImageFilter ()
 
 ~ImageToImageFilter () override
 
void VerifyInputInformation () ITKv5_CONST override
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
- Protected Member Functions inherited from itk::ImageSource< TSparseOutputImageType >
 ImageSource ()
 
 ~ImageSource () override=default
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual void BeforeThreadedGenerateData ()
 
virtual void AfterThreadedGenerateData ()
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
 ProcessObject ()
 
 ~ProcessObject () override
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void AddInput (DataObject *input)
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
virtual void SetPrimaryInput (DataObject *input)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
virtual void AddOutput (DataObject *output)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
virtual void VerifyPreconditions () ITKv5_CONST
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual void GenerateOutputInformation ()
 
virtual void PropagateResetPipeline ()
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void RestoreInputReleaseDataFlags ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Static Protected Member Functions

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ApplyUpdateThreaderCallback (void *arg)
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION CalculateChangeThreaderCallback (void *arg)
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION PrecalculateChangeThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ImageSource< TSparseOutputImageType >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 

Private Attributes

bool m_PrecomputeFlag
 
NodeListType::RegionListType m_RegionList
 
SparseFunctionTypem_SparseFunction
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >
static void SetGlobalDefaultDirectionTolerance (double)
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static double GetGlobalDefaultCoordinateTolerance ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 
- Protected Types inherited from itk::ImageToImageFilter< TInputImageType, TSparseOutputImageType >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >
bool m_IsInitialized
 
IdentifierType m_NumberOfIterations
 
IdentifierType m_ElapsedIterations
 
bool m_ManualReinitialization
 
double m_RMSChange
 
double m_MaximumRMSError
 
- Protected Attributes inherited from itk::ImageSource< TSparseOutputImageType >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
bool m_Updating
 
TimeStamp m_OutputInformationMTime
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

template<typename TInputImageType, typename TSparseOutputImageType>
class itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >

This class implements a multi-threaded base class for Image to SparseImage finite difference processes.

This class implements a multi-threading mechanism for implementing finite difference PDE's on sparse image types. The sparse image is a image of pointers to node variables at valid pixel locations and null pointers at others. The node variable type must have the following members: m_Index, m_Data and m_Update.
This class also adds precomputing support to the finite difference image filter scheme. This support can be used by certain filters to speed up the processing. The m_PrecomputeFlag should be set to true to use this and the Function object must provide a PrecomputeSparseUpdate method.
INPUTS
The input to this filter is either a regular or sparse image. Subclasses should provide a way of copying this information to the output sparse image or initializing the output image nodes from the input image.
OUTPUTS
The output is a sparse image. The output will be in the m_Data members of the nodes of the sparse image.
IMPORTANT
The output sparse image type must be templated with a node type that at least has the following member variables: m_Index, m_Data and m_Update.

Definition at line 63 of file itkFiniteDifferenceSparseImageFilter.h.

Member Typedef Documentation

◆ ConstPointer

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ConstPointer = SmartPointer<const Self>

Definition at line 74 of file itkFiniteDifferenceSparseImageFilter.h.

◆ FiniteDifferenceFunctionType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

Definition at line 84 of file itkFiniteDifferenceSparseImageFilter.h.

◆ IndexType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::IndexType = typename SparseOutputImageType::IndexType

Typedefs from the sparse output image type.

Definition at line 92 of file itkFiniteDifferenceSparseImageFilter.h.

◆ InputImageType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::InputImageType = typename Superclass::InputImageType

Typedefs from the superclass

Definition at line 80 of file itkFiniteDifferenceSparseImageFilter.h.

◆ NodeDataType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::NodeDataType = typename OutputNodeType::NodeDataType

The type for the data variable of OutputNodeType.

Definition at line 98 of file itkFiniteDifferenceSparseImageFilter.h.

◆ NodeListType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::NodeListType = typename SparseOutputImageType::NodeListType

Definition at line 95 of file itkFiniteDifferenceSparseImageFilter.h.

◆ NodeValueType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::NodeValueType = typename OutputNodeType::NodeValueType

The basic scalar variable type used in OutputNodeType. Expected to be float or double. If NodeDataType is a scalar, then this is the same type as that.

Definition at line 103 of file itkFiniteDifferenceSparseImageFilter.h.

◆ OutputNodeType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::OutputNodeType = typename SparseOutputImageType::NodeType

Definition at line 94 of file itkFiniteDifferenceSparseImageFilter.h.

◆ PixelType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::PixelType = typename Superclass::PixelType

Definition at line 82 of file itkFiniteDifferenceSparseImageFilter.h.

◆ Pointer

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::Pointer = SmartPointer<Self>

Definition at line 73 of file itkFiniteDifferenceSparseImageFilter.h.

◆ Self

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::Self = FiniteDifferenceSparseImageFilter

Standard class type alias

Definition at line 70 of file itkFiniteDifferenceSparseImageFilter.h.

◆ SizeType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::SizeType = typename SparseOutputImageType::SizeType

Definition at line 93 of file itkFiniteDifferenceSparseImageFilter.h.

◆ SparseFunctionType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::SparseFunctionType = FiniteDifferenceSparseImageFunction<SparseOutputImageType>

The sparse image finite difference function type used in this class.

Definition at line 106 of file itkFiniteDifferenceSparseImageFilter.h.

◆ SparseOutputImageType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::SparseOutputImageType = typename Superclass::OutputImageType

Definition at line 81 of file itkFiniteDifferenceSparseImageFilter.h.

◆ Superclass

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::Superclass = FiniteDifferenceImageFilter<TInputImageType, TSparseOutputImageType>

Definition at line 71 of file itkFiniteDifferenceSparseImageFilter.h.

◆ TimeStepType

template<typename TInputImageType, typename TSparseOutputImageType>
using itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::TimeStepType = typename Superclass::TimeStepType

Definition at line 83 of file itkFiniteDifferenceSparseImageFilter.h.

Constructor & Destructor Documentation

◆ FiniteDifferenceSparseImageFilter()

template<typename TInputImageType, typename TSparseOutputImageType>
itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::FiniteDifferenceSparseImageFilter ( )
protected

◆ ~FiniteDifferenceSparseImageFilter()

template<typename TInputImageType, typename TSparseOutputImageType>
itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::~FiniteDifferenceSparseImageFilter ( )
overrideprotecteddefault

Member Function Documentation

◆ AllocateUpdateBuffer()

template<typename TInputImageType, typename TSparseOutputImageType>
void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::AllocateUpdateBuffer ( )
inlineoverrideprotectedvirtual

This class does not use AllocateUpdateBuffer to allocate memory for its narrow band. All memory is handled through the SparseImage class.

Implements itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >.

Definition at line 130 of file itkFiniteDifferenceSparseImageFilter.h.

◆ ApplyUpdate()

template<typename TInputImageType, typename TSparseOutputImageType>
void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ApplyUpdate ( const TimeStepType dt)
overrideprotected

This function updates the m_Data variable in the output image nodes using the update values computed by CalculateChange.

◆ ApplyUpdateThreaderCallback()

template<typename TInputImageType, typename TSparseOutputImageType>
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ApplyUpdateThreaderCallback ( void *  arg)
staticprotected

Multi-threaded implementation of ApplyUpdate.

◆ CalculateChange()

template<typename TInputImageType, typename TSparseOutputImageType>
TimeStepType itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::CalculateChange ( )
overrideprotectedvirtual

This method computes changes to the output image using the ComputeSparseUpdate method in the Sparse Function object.

Implements itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >.

◆ CalculateChangeThreaderCallback()

template<typename TInputImageType, typename TSparseOutputImageType>
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::CalculateChangeThreaderCallback ( void *  arg)
staticprotected

Multuthreaded implementation of CalculateChange

◆ DataConstraint()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual NodeDataType itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::DataConstraint ( const NodeDataType data) const
inlineprotectedvirtual

This function can be used to implements constraints on the range of data values. Default is no constraint.

Definition at line 136 of file itkFiniteDifferenceSparseImageFilter.h.

◆ GetNameOfClass()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual const char* itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::GetNameOfClass ( ) const
virtual

◆ GetPrecomputeFlag()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual bool itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::GetPrecomputeFlag ( ) const
virtual

◆ GetSplitRegion()

template<typename TInputImageType, typename TSparseOutputImageType>
ThreadIdType itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::GetSplitRegion ( ThreadIdType  i,
ThreadIdType  num,
ThreadRegionType splitRegion 
)
protected

This function returns a single region for use in multi-threading.

◆ Initialize()

template<typename TInputImageType, typename TSparseOutputImageType>
void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::Initialize ( )
overrideprotectedvirtual

This method splits the active pixels of the sparse image into equal size lists for multi-threading. These lists remain constant throughout the operation of this filter.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImageType, TSparseOutputImageType >.

◆ PrecalculateChange()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::PrecalculateChange ( )
protectedvirtual

This method provides a means of performing a first pass for computing the change and storing intermediate values that will then be used by CalculateChange. This can be used to speed up certain update rules.

◆ PrecalculateChangeThreaderCallback()

template<typename TInputImageType, typename TSparseOutputImageType>
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::PrecalculateChangeThreaderCallback ( void *  arg)
staticprotected

Multi-threaded implementation of PrecalculateChange

◆ PrintSelf()

template<typename TInputImageType, typename TSparseOutputImageType>
void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

STL map to store the named inputs and outputs

Reimplemented from itk::ProcessObject.

◆ SetPrecomputeFlag()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::SetPrecomputeFlag ( bool  _arg)
virtual

◆ SetSparseFunction()

template<typename TInputImageType, typename TSparseOutputImageType>
void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::SetSparseFunction ( SparseFunctionType sf)

Sets the function object that will be called for computing updates.

◆ ThreadedApplyUpdate()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ThreadedApplyUpdate ( const TimeStepType dt,
const ThreadRegionType regionToProcess,
ThreadIdType  threadId 
)
protectedvirtual

◆ ThreadedCalculateChange()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual TimeStepType itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ThreadedCalculateChange ( const ThreadRegionType regionToProcess,
ThreadIdType  threadId 
)
protectedvirtual

◆ ThreadedPrecalculateChange()

template<typename TInputImageType, typename TSparseOutputImageType>
virtual void itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ThreadedPrecalculateChange ( const ThreadRegionType regionToProcess,
ThreadIdType  threadId 
)
protectedvirtual

Member Data Documentation

◆ ImageDimension

template<typename TInputImageType, typename TSparseOutputImageType>
constexpr unsigned int itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::ImageDimension = Superclass::ImageDimension
staticconstexpr

Dimensionality of input and output data is assumed to be the same. It is inherited from the superclass.

Definition at line 89 of file itkFiniteDifferenceSparseImageFilter.h.

◆ m_PrecomputeFlag

template<typename TInputImageType, typename TSparseOutputImageType>
bool itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::m_PrecomputeFlag
private

Flag to let the class know whether or not to call PrecalculateChange.

Definition at line 205 of file itkFiniteDifferenceSparseImageFilter.h.

◆ m_RegionList

template<typename TInputImageType, typename TSparseOutputImageType>
NodeListType::RegionListType itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::m_RegionList
private

A list of subregions of the active set of pixels in the sparse image which are passed to each thread for parallel processing.

Definition at line 212 of file itkFiniteDifferenceSparseImageFilter.h.

◆ m_SparseFunction

template<typename TInputImageType, typename TSparseOutputImageType>
SparseFunctionType* itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::m_SparseFunction
private

The Sparse function type.

Definition at line 208 of file itkFiniteDifferenceSparseImageFilter.h.


The documentation for this class was generated from the following file: