ITK  5.1.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | List of all members
itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField > Class Template Reference

#include <itkPDEDeformableRegistrationFilter.h>

+ Inheritance diagram for itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:
+ Collaboration diagram for itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using DisplacementFieldPointer = typename DisplacementFieldType::Pointer
 
using DisplacementFieldType = TDisplacementField
 
using FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
 
using FixedImageConstPointer = typename FixedImageType::ConstPointer
 
using FixedImagePointer = typename FixedImageType::Pointer
 
using FixedImageType = TFixedImage
 
using MovingImageConstPointer = typename MovingImageType::ConstPointer
 
using MovingImagePointer = typename MovingImageType::Pointer
 
using MovingImageType = TMovingImage
 
using OutputImageType = typename Superclass::OutputImageType
 
using PDEDeformableRegistrationFunctionType = PDEDeformableRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType >
 
using Pointer = SmartPointer< Self >
 
using Self = PDEDeformableRegistrationFilter
 
using Superclass = DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 
- Public Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
 
using InputImageType = typename Superclass::InputImageType
 
using OutputImageType = typename Superclass::OutputImageType
 
using PixelType = typename Superclass::PixelType
 
using Pointer = SmartPointer< Self >
 
using Self = DenseFiniteDifferenceImageFilter
 
using Superclass = FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 
using TimeStepType = typename Superclass::TimeStepType
 
using UpdateBufferType = OutputImageType
 
- Public Types inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using FiniteDifferenceFunctionType = FiniteDifferenceFunction< TDisplacementField >
 
using InputImageType = TDisplacementField
 
using InputPixelType = typename TDisplacementField ::PixelType
 
using InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType
 
using NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType
 
using OutputImageType = TDisplacementField
 
using OutputPixelType = typename TDisplacementField ::PixelType
 
using OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType
 
using PixelType = OutputPixelType
 
using Pointer = SmartPointer< Self >
 
using RadiusType = typename FiniteDifferenceFunctionType::RadiusType
 
using Self = FiniteDifferenceImageFilter
 
using Superclass = InPlaceImageFilter< TDisplacementField, TDisplacementField >
 
using TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType
 
- Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TDisplacementField
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using OutputImageType = typename Superclass::OutputImageType
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TDisplacementField, TDisplacementField >
 
- Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TDisplacementField
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TDisplacementField >
 
- Public Types inherited from itk::ImageSource< TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TDisplacementField
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
DisplacementFieldTypeGetDisplacementField ()
 
virtual const FixedImageTypeGetFixedImage () const
 
virtual const DisplacementFieldTypeGetInitialDisplacementField () const
 
virtual const MovingImageTypeGetMovingImage () const
 
virtual const char * GetNameOfClass () const
 
std::vector< SmartPointer< DataObject > >::size_type GetNumberOfValidRequiredInputs () const override
 
virtual void SetFixedImage (const FixedImageType *input)
 
virtual void SetInitialDisplacementField (const DisplacementFieldType *input)
 
virtual void SetMovingImage (const MovingImageType *input)
 
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual const FiniteDifferenceFunctionType ::PointerGetDifferenceFunction () const
 
virtual const IdentifierTypeGetElapsedIterations () const
 
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
 
virtual void SetNumberOfIterations (IdentifierType _arg)
 
virtual const IdentifierTypeGetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
virtual void SetIsInitialized (bool _arg)
 
virtual bool GetIsInitialized ()
 
void SetStateToUninitialized ()
 
void SetStateToInitialized ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
virtual bool CanRunInPlace () const
 
- Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TDisplacementField *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual const float & GetProgress () const
 
void UpdateProgress (float progress)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputInformation ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual void ResetPipeline ()
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
MultiThreaderTypeGetMultiThreader () const
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void PrepareOutputs ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static void SetGlobalDefaultDirectionTolerance (double)
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static double GetGlobalDefaultCoordinateTolerance ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static constexpr unsigned int OutputImageDimension
 
using StandardDeviationsType = FixedArray< double, ImageDimension >
 
StandardDeviationsType m_StandardDeviations
 
StandardDeviationsType m_UpdateFieldStandardDeviations
 
bool m_SmoothDisplacementField
 
bool m_SmoothUpdateField
 
DisplacementFieldPointer m_TempField
 
double m_MaximumError
 
unsigned int m_MaximumKernelWidth
 
bool m_StopRegistrationFlag
 
virtual void SetSmoothDisplacementField (bool _arg)
 
virtual bool GetSmoothDisplacementField () const
 
virtual void SmoothDisplacementFieldOn ()
 
virtual void SmoothDisplacementFieldOff ()
 
virtual void SetStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetStandardDeviations (double value)
 
virtual const StandardDeviationsTypeGetStandardDeviations () const
 
virtual void SetSmoothUpdateField (bool _arg)
 
virtual bool GetSmoothUpdateField () const
 
virtual void SmoothUpdateFieldOn ()
 
virtual void SmoothUpdateFieldOff ()
 
virtual void SetUpdateFieldStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetUpdateFieldStandardDeviations (double value)
 
virtual const StandardDeviationsTypeGetUpdateFieldStandardDeviations () const
 
virtual void StopRegistration ()
 
virtual void SetMaximumError (double _arg)
 
virtual double GetMaximumError () const
 
virtual void SetMaximumKernelWidth (unsigned int _arg)
 
virtual unsigned int GetMaximumKernelWidth () const
 
 PDEDeformableRegistrationFilter ()
 
 ~PDEDeformableRegistrationFilter () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
bool Halt () override
 
void CopyInputToOutput () override
 
void InitializeIteration () override
 
virtual void SmoothDisplacementField ()
 
virtual void SmoothUpdateField ()
 
void PostProcessOutput () override
 
void Initialize () override
 
void GenerateOutputInformation () override
 
void GenerateInputRequestedRegion () override
 

Additional Inherited Members

- Protected Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using ThreadRegionType = typename UpdateBufferType::RegionType
 
- Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Protected Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
void AllocateUpdateBuffer () override
 
void ApplyUpdate (const TimeStepType &dt) override
 
TimeStepType CalculateChange () override
 
void CopyInputToOutput () override
 
 DenseFiniteDifferenceImageFilter ()
 
virtual UpdateBufferTypeGetUpdateBuffer ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
virtual TimeStepType ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
 ~DenseFiniteDifferenceImageFilter () override=default
 
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 FiniteDifferenceImageFilter ()
 
 ~FiniteDifferenceImageFilter () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ApplyUpdate (const TimeStepType &dt)=0
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
virtual bool ThreadedHalt (void *)
 
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const
 
virtual void SetElapsedIterations (IdentifierType _arg)
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
 InPlaceImageFilter ()=default
 
 ~InPlaceImageFilter () override=default
 
void AllocateOutputs () override
 
void ReleaseInputs () override
 
virtual bool GetRunningInPlace () const
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
 ImageToImageFilter ()
 
 ~ImageToImageFilter () override
 
void VerifyInputInformation () ITKv5_CONST override
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
- Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
 ImageSource ()
 
 ~ImageSource () override=default
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual void BeforeThreadedGenerateData ()
 
virtual void AfterThreadedGenerateData ()
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
 ProcessObject ()
 
 ~ProcessObject () override
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void AddInput (DataObject *input)
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
virtual void SetPrimaryInput (DataObject *input)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
virtual void AddOutput (DataObject *output)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
virtual void VerifyPreconditions () ITKv5_CONST
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual void PropagateResetPipeline ()
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void RestoreInputReleaseDataFlags ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 
- Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
bool m_IsInitialized
 
IdentifierType m_NumberOfIterations
 
IdentifierType m_ElapsedIterations
 
bool m_ManualReinitialization
 
double m_RMSChange
 
double m_MaximumRMSError
 
- Protected Attributes inherited from itk::ImageSource< TDisplacementField >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
bool m_Updating
 
TimeStamp m_OutputInformationMTime
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Deformably register two images using a PDE algorithm.

PDEDeformableRegistrationFilter is a base case for filter implementing a PDE deformable algorithm that register two images by computing the displacement field which will map a moving image onto a fixed image.

A displacement field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type and the displacement Field type.

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial displacement field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The output displacement field can be obtained via methods GetOutput or GetDisplacementField.

The PDE algorithm is run for a user defined number of iterations. Typically the PDE algorithm requires period Gaussin smoothing of the displacement field to enforce an elastic-like condition. The amount of smoothing is governed by a set of user defined standard deviations (one for each dimension).

In terms of memory, this filter keeps two internal buffers: one for storing the intermediate updates to the field and one for double-buffering when smoothing the displacement field. Both buffers are the same type and size as the output displacement field.

This class make use of the finite difference solver hierarchy. Update for each iteration is computed using a PDEDeformableRegistrationFunction.

Warning
This filter assumes that the fixed image type, moving image type and displacement field type all have the same number of dimensions.
See also
PDEDeformableRegistrationFunction.

Definition at line 73 of file itkPDEDeformableRegistrationFilter.h.

Member Typedef Documentation

◆ ConstPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer = SmartPointer<const Self>

Definition at line 83 of file itkPDEDeformableRegistrationFilter.h.

◆ DisplacementFieldPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldPointer = typename DisplacementFieldType::Pointer

Definition at line 103 of file itkPDEDeformableRegistrationFilter.h.

◆ DisplacementFieldType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType = TDisplacementField

Deformation field type.

Definition at line 102 of file itkPDEDeformableRegistrationFilter.h.

◆ FiniteDifferenceFunctionType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

◆ FixedImageConstPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageConstPointer = typename FixedImageType::ConstPointer

Definition at line 94 of file itkPDEDeformableRegistrationFilter.h.

◆ FixedImagePointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer = typename FixedImageType::Pointer

Definition at line 93 of file itkPDEDeformableRegistrationFilter.h.

◆ FixedImageType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType = TFixedImage

FixedImage image type.

Definition at line 92 of file itkPDEDeformableRegistrationFilter.h.

◆ MovingImageConstPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageConstPointer = typename MovingImageType::ConstPointer

Definition at line 99 of file itkPDEDeformableRegistrationFilter.h.

◆ MovingImagePointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer = typename MovingImageType::Pointer

Definition at line 98 of file itkPDEDeformableRegistrationFilter.h.

◆ MovingImageType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType = TMovingImage

MovingImage image type.

Definition at line 97 of file itkPDEDeformableRegistrationFilter.h.

◆ OutputImageType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::OutputImageType = typename Superclass::OutputImageType

Types inherithed from the superclass

Definition at line 106 of file itkPDEDeformableRegistrationFilter.h.

◆ PDEDeformableRegistrationFunctionType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PDEDeformableRegistrationFunctionType = PDEDeformableRegistrationFunction<FixedImageType, MovingImageType, DisplacementFieldType>

PDEDeformableRegistrationFilterFunction type.

Definition at line 113 of file itkPDEDeformableRegistrationFilter.h.

◆ Pointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Pointer = SmartPointer<Self>

Definition at line 82 of file itkPDEDeformableRegistrationFilter.h.

◆ Self

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Self = PDEDeformableRegistrationFilter

Standard class type aliases.

Definition at line 80 of file itkPDEDeformableRegistrationFilter.h.

◆ StandardDeviationsType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::StandardDeviationsType = FixedArray<double, ImageDimension>

Standard deviation for Gaussian smoothing

Definition at line 161 of file itkPDEDeformableRegistrationFilter.h.

◆ Superclass

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
using itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Superclass = DenseFiniteDifferenceImageFilter<TDisplacementField, TDisplacementField>

Definition at line 81 of file itkPDEDeformableRegistrationFilter.h.

Constructor & Destructor Documentation

◆ PDEDeformableRegistrationFilter()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PDEDeformableRegistrationFilter ( )
protected

Standard deviation for Gaussian smoothing

◆ ~PDEDeformableRegistrationFilter()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::~PDEDeformableRegistrationFilter ( )
overrideprotecteddefault

Standard deviation for Gaussian smoothing

Member Function Documentation

◆ CopyInputToOutput()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CopyInputToOutput ( )
overrideprotectedvirtual

A simple method to copy the data from the input to the output. If the input does not exist, a zero field is written to the output.

Implements itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

◆ CreateAnother()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual::itk::LightObject::Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

Reimplemented in itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

◆ GenerateInputRequestedRegion()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GenerateInputRequestedRegion ( )
overrideprotectedvirtual

It is difficult to compute in advance the input moving image region required to compute the requested output region. Thus the safest thing to do is to request for the whole moving image.

For the fixed image and displacement field, the input requested region set to be the same as that of the output requested region.

Reimplemented from itk::ProcessObject.

◆ GenerateOutputInformation()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GenerateOutputInformation ( )
overrideprotectedvirtual

By default the output displacement field has the same Spacing, Origin and LargestPossibleRegion as the input/initial displacement field. If the initial displacement field is not set, the output information is copied from the fixed image.

Reimplemented from itk::ProcessObject.

◆ GetDisplacementField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
DisplacementFieldType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetDisplacementField ( )
inline

Get output displacement field.

Definition at line 138 of file itkPDEDeformableRegistrationFilter.h.

◆ GetFixedImage()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const FixedImageType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetFixedImage ( ) const
virtual

Get the fixed image.

◆ GetInitialDisplacementField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const DisplacementFieldType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetInitialDisplacementField ( ) const
virtual

Get initial displacement field.

◆ GetMaximumError()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual double itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMaximumError ( ) const
virtual

Standard deviation for Gaussian smoothing

◆ GetMaximumKernelWidth()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual unsigned int itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMaximumKernelWidth ( ) const
virtual

Standard deviation for Gaussian smoothing

◆ GetMovingImage()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const MovingImageType* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImage ( ) const
virtual

Get the moving image.

◆ GetNameOfClass()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const char* itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const
virtual

◆ GetNumberOfValidRequiredInputs()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
std::vector<SmartPointer<DataObject> >::size_type itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNumberOfValidRequiredInputs ( ) const
overridevirtual

Get the number of valid inputs. For PDEDeformableRegistration, this checks whether the fixed and moving images have been set. While PDEDeformableRegistration can take a third input as an initial displacement field, this input is not a required input.

Reimplemented from itk::ProcessObject.

◆ GetSmoothDisplacementField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetSmoothDisplacementField ( ) const
virtual

Standard deviation for Gaussian smoothing

◆ GetSmoothUpdateField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetSmoothUpdateField ( ) const
virtual

Standard deviation for Gaussian smoothing

◆ GetStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const StandardDeviationsType& itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetStandardDeviations ( ) const
virtual

Get the Gaussian smoothing standard deviations use for smoothing the displacement field.

◆ GetUpdateFieldStandardDeviations()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const StandardDeviationsType& itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetUpdateFieldStandardDeviations ( ) const
virtual

Get the Gaussian smoothing standard deviations used for smoothing the update field.

◆ Halt()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Halt ( )
inlineoverrideprotectedvirtual

Supplies the halting criteria for this class of filters. The algorithm will stop after a user-specified number of iterations.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

Definition at line 224 of file itkPDEDeformableRegistrationFilter.h.

◆ Initialize()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Initialize ( )
overrideprotectedvirtual

This method is called before iterating the solution.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

◆ InitializeIteration()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )
overrideprotectedvirtual

Initialize the state of filter and equation before each iteration. Progress feeback is implemented as part of this method.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

Reimplemented in itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

◆ New()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
static Pointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::New ( )
static

Method for creation through the object factory.

◆ PostProcessOutput()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PostProcessOutput ( )
overrideprotectedvirtual

This method is called after the solution has been generated. In this case, the filter release the memory of the internal buffers.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

◆ PrintSelf()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Standard deviation for Gaussian smoothing

Reimplemented from itk::ProcessObject.

Reimplemented in itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

◆ SetFixedImage()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetFixedImage ( const FixedImageType input)
virtual

Set the fixed image.

◆ SetInitialDisplacementField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetInitialDisplacementField ( const DisplacementFieldType input)
virtual

Set initial displacement field.

◆ SetMaximumError()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetMaximumError ( double  _arg)
virtual

Set/Get the desired maximum error of the Gaussian kernel approximate.

See also
GaussianOperator.

◆ SetMaximumKernelWidth()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetMaximumKernelWidth ( unsigned int  _arg)
virtual

Set/Get the desired limits of the Gaussian kernel width.

See also
GaussianOperator.

◆ SetMovingImage()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImage ( const MovingImageType input)
virtual

Set the moving image.

◆ SetSmoothDisplacementField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetSmoothDisplacementField ( bool  _arg)
virtual

Set/Get whether the displacement field is smoothed (regularized). Smoothing the displacement yields a solution elastic in nature. If SmoothDisplacementField is on, then the displacement field is smoothed with a Gaussian whose standard deviations are specified with SetStandardDeviations()

◆ SetSmoothUpdateField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetSmoothUpdateField ( bool  _arg)
virtual

Set/Get whether the update field is smoothed (regularized). Smoothing the update field yields a solution viscous in nature. If SmoothUpdateField is on, then the update field is smoothed with a Gaussian whose standard deviations are specified with SetUpdateFieldStandardDeviations()

◆ SetStandardDeviations() [1/2]

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetStandardDeviations ( double  value)
virtual

Standard deviation for Gaussian smoothing

◆ SetStandardDeviations() [2/2]

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetStandardDeviations ( StandardDeviationsType  _arg)
virtual

Set the Gaussian smoothing standard deviations for the displacement field. The values are set with respect to pixel coordinates.

◆ SetUpdateFieldStandardDeviations() [1/2]

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetUpdateFieldStandardDeviations ( double  value)
virtual

Standard deviation for Gaussian smoothing

◆ SetUpdateFieldStandardDeviations() [2/2]

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetUpdateFieldStandardDeviations ( StandardDeviationsType  _arg)
virtual

Set the Gaussian smoothing standard deviations for the update field. The values are set with respect to pixel coordinates.

◆ SmoothDisplacementField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothDisplacementField ( )
protectedvirtual

Utility to smooth the displacement field (represented in the Output) using a Gaussian operator. The amount of smoothing can be specified by setting the StandardDeviations.

◆ SmoothDisplacementFieldOff()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothDisplacementFieldOff ( )
virtual

Standard deviation for Gaussian smoothing

◆ SmoothDisplacementFieldOn()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothDisplacementFieldOn ( )
virtual

Standard deviation for Gaussian smoothing

◆ SmoothUpdateField()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothUpdateField ( )
protectedvirtual

Utility to smooth the UpdateBuffer using a Gaussian operator. The amount of smoothing can be specified by setting the UpdateFieldStandardDeviations.

◆ SmoothUpdateFieldOff()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothUpdateFieldOff ( )
virtual

Standard deviation for Gaussian smoothing

◆ SmoothUpdateFieldOn()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SmoothUpdateFieldOn ( )
virtual

Standard deviation for Gaussian smoothing

◆ StopRegistration()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::StopRegistration ( )
inlinevirtual

Stop the registration after the current iteration.

Definition at line 198 of file itkPDEDeformableRegistrationFilter.h.

Member Data Documentation

◆ ImageDimension

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
constexpr unsigned int itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ImageDimension = Superclass::ImageDimension
staticconstexpr

Inherit some enums and type alias from the superclass.

Definition at line 116 of file itkPDEDeformableRegistrationFilter.h.

◆ m_MaximumError

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
double itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_MaximumError
private

Maximum error for Gaussian operator approximation.

Definition at line 296 of file itkPDEDeformableRegistrationFilter.h.

◆ m_MaximumKernelWidth

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
unsigned int itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_MaximumKernelWidth
private

Limits of Gaussian kernel width.

Definition at line 299 of file itkPDEDeformableRegistrationFilter.h.

◆ m_SmoothDisplacementField

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_SmoothDisplacementField
private

Modes to control smoothing of the update and displacement fields

Definition at line 287 of file itkPDEDeformableRegistrationFilter.h.

◆ m_SmoothUpdateField

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_SmoothUpdateField
private

Standard deviation for Gaussian smoothing

Definition at line 288 of file itkPDEDeformableRegistrationFilter.h.

◆ m_StandardDeviations

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
StandardDeviationsType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_StandardDeviations
private

Standard deviation for Gaussian smoothing

Definition at line 283 of file itkPDEDeformableRegistrationFilter.h.

◆ m_StopRegistrationFlag

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
bool itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_StopRegistrationFlag
private

Flag to indicate user stop registration request.

Definition at line 302 of file itkPDEDeformableRegistrationFilter.h.

◆ m_TempField

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
DisplacementFieldPointer itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_TempField
private

Temporary displacement field use for smoothing the the displacement field.

Definition at line 292 of file itkPDEDeformableRegistrationFilter.h.

◆ m_UpdateFieldStandardDeviations

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
StandardDeviationsType itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_UpdateFieldStandardDeviations
private

Standard deviation for Gaussian smoothing

Definition at line 284 of file itkPDEDeformableRegistrationFilter.h.


The documentation for this class was generated from the following file: