ITK  5.1.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Types | Protected Member Functions | Private Types | Private Attributes | List of all members
itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision > Class Template Reference

#include <itkRichardsonLucyDeconvolutionImageFilter.h>

+ Inheritance diagram for itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >:
+ Collaboration diagram for itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using InputImageType = TInputImage
 
using InternalComplexImagePointerType = typename Superclass::InternalComplexImagePointerType
 
using InternalComplexImageType = typename Superclass::InternalComplexImageType
 
using InternalComplexType = typename Superclass::InternalComplexType
 
using InternalImagePointerType = typename Superclass::InternalImagePointerType
 
using InternalImageType = typename Superclass::InternalImageType
 
using KernelImageType = TKernelImage
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = RichardsonLucyDeconvolutionImageFilter
 
using Superclass = IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
 
- Public Types inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using ConstPointer = SmartPointer< const Self >
 
using InputImageType = TInputImage
 
using InternalComplexImagePointerType = typename Superclass::InternalComplexImagePointerType
 
using InternalComplexImageType = typename Superclass::InternalComplexImageType
 
using InternalComplexType = typename Superclass::InternalComplexType
 
using InternalImagePointerType = typename Superclass::InternalImagePointerType
 
using InternalImageType = typename Superclass::InternalImageType
 
using KernelImageType = TKernelImage
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = IterativeDeconvolutionImageFilter
 
using Superclass = FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
 
- Public Types inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using BoundaryConditionPointerType = typename Superclass::BoundaryConditionPointerType
 
using BoundaryConditionType = typename Superclass::BoundaryConditionType
 
using ConstPointer = SmartPointer< const Self >
 
using InputImageType = TInputImage
 
using InputIndexType = typename InputImageType::IndexType
 
using InputPixelType = typename InputImageType::PixelType
 
using InputRegionType = typename InputImageType::RegionType
 
using InputSizeType = typename InputImageType::SizeType
 
using InternalComplexImagePointerType = typename InternalComplexImageType::Pointer
 
using InternalComplexImageType = Image< InternalComplexType, TInputImage::ImageDimension >
 
using InternalComplexType = std::complex< TInternalPrecision >
 
using InternalImagePointerType = typename InternalImageType::Pointer
 
using InternalImageType = Image< TInternalPrecision, TInputImage::ImageDimension >
 
using KernelImageType = TKernelImage
 
using KernelIndexType = typename KernelImageType::IndexType
 
using KernelPixelType = typename KernelImageType::PixelType
 
using KernelRegionType = typename KernelImageType::RegionType
 
using KernelSizeType = typename KernelImageType::SizeType
 
using OutputImageType = TOutputImage
 
using OutputIndexType = typename OutputImageType::IndexType
 
using OutputPixelType = typename OutputImageType::PixelType
 
using OutputRegionType = typename OutputImageType::RegionType
 
using OutputSizeType = typename OutputImageType::SizeType
 
using Pointer = SmartPointer< Self >
 
using Self = FFTConvolutionImageFilter
 
using SizeValueType = typename InputSizeType::SizeValueType
 
using Superclass = ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
 
- Public Types inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
using BoundaryConditionPointerType = BoundaryConditionType *
 
using BoundaryConditionType = ImageBoundaryCondition< TInputImage >
 
using ConstPointer = SmartPointer< const Self >
 
using DefaultBoundaryConditionType = ZeroFluxNeumannBoundaryCondition< TInputImage >
 
using InputImageType = TInputImage
 
using InputIndexType = typename InputImageType::IndexType
 
using InputPixelType = typename InputImageType::PixelType
 
using InputRegionType = typename InputImageType::RegionType
 
using InputSizeType = typename InputImageType::SizeType
 
using KernelImageType = TKernelImage
 
using KernelIndexType = typename KernelImageType::IndexType
 
using KernelPixelType = typename KernelImageType::PixelType
 
using KernelRegionType = typename KernelImageType::RegionType
 
using KernelSizeType = typename KernelImageType::SizeType
 
using OutputImageType = TOutputImage
 
using OutputIndexType = typename OutputImageType::IndexType
 
using OutputPixelType = typename OutputImageType::PixelType
 
using OutputRegionType = typename OutputImageType::RegionType
 
using OutputSizeType = typename OutputImageType::SizeType
 
using Pointer = SmartPointer< Self >
 
using Self = ConvolutionImageFilterBase
 
using SizeValueType = typename InputSizeType::SizeValueType
 
using Superclass = ImageToImageFilter< TInputImage, TOutputImage >
 
using OutputRegionModeEnum = ConvolutionImageFilterOutputRegionEnum
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TOutputImage >
 
- Public Types inherited from itk::ImageSource< TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual const char * GetNameOfClass () const
 
- Public Member Functions inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
virtual void SetNumberOfIterations (unsigned int _arg)
 
virtual unsigned int GetNumberOfIterations ()
 
virtual InternalImageTypeGetModifiableCurrentEstimate ()
 
virtual const InternalImageTypeGetCurrentEstimate () const
 
void SetStopIteration (bool stop)
 
virtual bool GetStopIteration () const
 
virtual unsigned int GetIteration () const
 
- Public Member Functions inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
virtual SizeValueType GetSizeGreatestPrimeFactor ()
 
virtual void SetSizeGreatestPrimeFactor (SizeValueType _arg)
 
- Public Member Functions inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
virtual void SetBoundaryCondition (BoundaryConditionPointerType _arg)
 
virtual BoundaryConditionPointerType GetBoundaryCondition () const
 
virtual void SetKernelImage (const KernelImageType *input)
 
virtual const KernelImageTypeGetKernelImage () const
 
virtual void SetNormalize (bool _arg)
 
virtual bool GetNormalize () const
 
virtual void NormalizeOn ()
 
virtual void NormalizeOff ()
 
virtual void SetOutputRegionMode (const OutputRegionModeEnum _arg)
 
virtual OutputRegionModeEnum GetOutputRegionMode () const
 
virtual void SetOutputRegionModeToSame ()
 
virtual void SetOutputRegionModeToValid ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual const float & GetProgress () const
 
void UpdateProgress (float progress)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputInformation ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual void ResetPipeline ()
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
MultiThreaderTypeGetMultiThreader () const
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void PrepareOutputs ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static void SetGlobalDefaultDirectionTolerance (double)
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static double GetGlobalDefaultCoordinateTolerance ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Types

using FFTFilterType = typename Superclass::FFTFilterType
 
using IFFTFilterType = typename Superclass::IFFTFilterType
 
- Protected Types inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using FFTFilterType = typename Superclass::FFTFilterType
 
using IFFTFilterType = typename Superclass::IFFTFilterType
 
- Protected Types inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using FFTFilterType = RealToHalfHermitianForwardFFTImageFilter< InternalImageType, InternalComplexImageType >
 
using IFFTFilterType = HalfHermitianToRealInverseFFTImageFilter< InternalComplexImageType, InternalImageType >
 
- Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 

Protected Member Functions

void Finish (ProgressAccumulator *progress, float progressWeight) override
 
void Initialize (ProgressAccumulator *progress, float progressWeight, float iterationProgressWeight) override
 
void Iteration (ProgressAccumulator *progress, float iterationProgressWeight) override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 RichardsonLucyDeconvolutionImageFilter ()
 
 ~RichardsonLucyDeconvolutionImageFilter () override
 
- Protected Member Functions inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
 IterativeDeconvolutionImageFilter ()
 
 ~IterativeDeconvolutionImageFilter () override
 
void GenerateInputRequestedRegion () override
 
void GenerateData () override
 
- Protected Member Functions inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
void CropOutput (InternalImageType *paddedOutput, ProgressAccumulator *progress, float progressWeight)
 
 FFTConvolutionImageFilter ()
 
InputSizeType GetPadLowerBound () const
 
InputSizeType GetPadSize () const
 
bool GetXDimensionIsOdd () const
 
void PadInput (const InputImageType *input, InternalImagePointerType &paddedInput, ProgressAccumulator *progress, float progressWeight)
 
void PrepareInput (const InputImageType *input, InternalComplexImagePointerType &preparedInput, ProgressAccumulator *progress, float progressWeight)
 
void PrepareInputs (const InputImageType *input, const KernelImageType *kernel, InternalComplexImagePointerType &preparedInput, InternalComplexImagePointerType &preparedKernel, ProgressAccumulator *progress, float progressWeight)
 
void PrepareKernel (const KernelImageType *kernel, InternalComplexImagePointerType &preparedKernel, ProgressAccumulator *progress, float progressWeight)
 
void ProduceOutput (InternalComplexImageType *paddedOutput, ProgressAccumulator *progress, float progressWeight)
 
void TransformPaddedInput (const InternalImageType *paddedInput, InternalComplexImagePointerType &transformedInput, ProgressAccumulator *progress, float progressWeight)
 
 ~FFTConvolutionImageFilter () override=default
 
- Protected Member Functions inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
 ConvolutionImageFilterBase ()
 
 ~ConvolutionImageFilterBase () override=default
 
void GenerateOutputInformation () override
 
OutputRegionType GetValidRegion () const
 
void VerifyInputInformation () ITKv5_CONST override
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
 ImageToImageFilter ()
 
 ~ImageToImageFilter () override
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
 ImageSource ()
 
 ~ImageSource () override=default
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
virtual void AfterThreadedGenerateData ()
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
 ProcessObject ()
 
 ~ProcessObject () override
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void AddInput (DataObject *input)
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
virtual void SetPrimaryInput (DataObject *input)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
virtual void AddOutput (DataObject *output)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
virtual void VerifyPreconditions () ITKv5_CONST
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void RestoreInputReleaseDataFlags ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Types

using ComplexConjugateMultiplyType = MultiplyImageFilter< InternalComplexImageType, ConjugateAdaptorType, InternalComplexImageType >
 
using ComplexMultiplyType = MultiplyImageFilter< InternalComplexImageType >
 
using ConjugateAdaptorType = ComplexConjugateImageAdaptor< InternalComplexImageType >
 
using DivideFilterType = DivideOrZeroOutImageFilter< InternalImageType >
 
using MultiplyFilterType = MultiplyImageFilter< InternalImageType >
 

Private Attributes

ComplexMultiplyType::Pointer m_ComplexMultiplyFilter1
 
ComplexConjugateMultiplyType::Pointer m_ComplexMultiplyFilter2
 
ConjugateAdaptorType::Pointer m_ConjugateAdaptor
 
DivideFilterType::Pointer m_DivideFilter
 
FFTFilterType::Pointer m_FFTFilter
 
IFFTFilterType::Pointer m_IFFTFilter1
 
IFFTFilterType::Pointer m_IFFTFilter2
 
MultiplyFilterType::Pointer m_MultiplyFilter
 
InternalImagePointerType m_PaddedInput
 

Additional Inherited Members

- Static Public Attributes inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
static constexpr unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
static constexpr unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static constexpr unsigned int InputImageDimension = TInputImage::ImageDimension
 
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
InternalComplexImagePointerType m_TransferFunction
 
InternalImagePointerType m_CurrentEstimate
 
- Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
bool m_Updating
 
TimeStamp m_OutputInformationMTime
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

template<typename TInputImage, typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
class itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >

Deconvolve an image using the Richardson-Lucy deconvolution algorithm.

This filter implements the Richardson-Lucy deconvolution algorithm as defined in Bertero M and Boccacci P, "Introduction to Inverse Problems in Imaging", 1998. The algorithm assumes that the input image has been formed by a linear shift-invariant system with a known kernel.

The Richardson-Lucy algorithm assumes that noise in the image follows a Poisson distribution and that the distribution for each pixel is independent of the other pixels.

This code was adapted from the Insight Journal contribution:

"Deconvolution: infrastructure and reference algorithms" by Gaetan Lehmann https://hdl.handle.net/10380/3207

Author
Gaetan Lehmann, Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France
Cory Quammen, The University of North Carolina at Chapel Hill
See also
IterativeDeconvolutionImageFilter
LandweberDeconvolutionImageFilter
ProjectedLandweberDeconvolutionImageFilter

Definition at line 62 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Member Typedef Documentation

◆ ComplexConjugateMultiplyType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ComplexConjugateMultiplyType = MultiplyImageFilter<InternalComplexImageType, ConjugateAdaptorType, InternalComplexImageType>
private

Definition at line 118 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ ComplexMultiplyType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ComplexMultiplyType = MultiplyImageFilter<InternalComplexImageType>
private

Definition at line 114 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ ConjugateAdaptorType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ConjugateAdaptorType = ComplexConjugateImageAdaptor<InternalComplexImageType>
private

Definition at line 116 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ ConstPointer

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ConstPointer = SmartPointer<const Self>

Definition at line 72 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ DivideFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::DivideFilterType = DivideOrZeroOutImageFilter<InternalImageType>
private

Definition at line 115 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ FFTFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::FFTFilterType = typename Superclass::FFTFilterType
protected

Definition at line 105 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ IFFTFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::IFFTFilterType = typename Superclass::IFFTFilterType
protected

Definition at line 106 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ InputImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InputImageType = TInputImage

Other useful type alias.

Definition at line 75 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ InternalComplexImagePointerType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalComplexImagePointerType = typename Superclass::InternalComplexImagePointerType

Definition at line 84 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ InternalComplexImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalComplexImageType = typename Superclass::InternalComplexImageType

Definition at line 83 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ InternalComplexType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalComplexType = typename Superclass::InternalComplexType

Definition at line 82 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ InternalImagePointerType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalImagePointerType = typename Superclass::InternalImagePointerType

Definition at line 81 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ InternalImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalImageType = typename Superclass::InternalImageType

Internal types used by the FFT filters.

Definition at line 80 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ KernelImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::KernelImageType = TKernelImage

Definition at line 76 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ MultiplyFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::MultiplyFilterType = MultiplyImageFilter<InternalImageType>
private

Filters to compute each iterative update step.

Definition at line 113 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ OutputImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::OutputImageType = TOutputImage

Definition at line 77 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ Pointer

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Pointer = SmartPointer<Self>

Definition at line 71 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ Self

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Self = RichardsonLucyDeconvolutionImageFilter

Standard type alias.

Definition at line 69 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ Superclass

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Superclass = IterativeDeconvolutionImageFilter<TInputImage, TKernelImage, TOutputImage, TInternalPrecision>

Definition at line 70 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Constructor & Destructor Documentation

◆ RichardsonLucyDeconvolutionImageFilter()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::RichardsonLucyDeconvolutionImageFilter ( )
protected

◆ ~RichardsonLucyDeconvolutionImageFilter()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::~RichardsonLucyDeconvolutionImageFilter ( )
overrideprotected

Member Function Documentation

◆ CreateAnother()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
virtual::itk::LightObject::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

◆ Finish()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Finish ( ProgressAccumulator progress,
float  progressWeight 
)
overrideprotectedvirtual

◆ GetNameOfClass()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
virtual const char* itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::GetNameOfClass ( ) const
virtual

◆ Initialize()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Initialize ( ProgressAccumulator progress,
float  progressWeight,
float  iterationProgressWeight 
)
overrideprotectedvirtual

◆ Iteration()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Iteration ( ProgressAccumulator ,
float   
)
overrideprotectedvirtual

◆ New()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
static Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::New ( )
static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Discrete Fourier transform of the padded kernel.

Reimplemented from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

Member Data Documentation

◆ m_ComplexMultiplyFilter1

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
ComplexMultiplyType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_ComplexMultiplyFilter1
private

Definition at line 122 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_ComplexMultiplyFilter2

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
ComplexConjugateMultiplyType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_ComplexMultiplyFilter2
private

Definition at line 127 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_ConjugateAdaptor

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
ConjugateAdaptorType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_ConjugateAdaptor
private

Definition at line 126 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_DivideFilter

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
DivideFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_DivideFilter
private

Definition at line 124 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_FFTFilter

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
FFTFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_FFTFilter
private

Definition at line 125 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_IFFTFilter1

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
IFFTFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_IFFTFilter1
private

Definition at line 123 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_IFFTFilter2

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
IFFTFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_IFFTFilter2
private

Definition at line 128 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_MultiplyFilter

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
MultiplyFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_MultiplyFilter
private

Definition at line 129 of file itkRichardsonLucyDeconvolutionImageFilter.h.

◆ m_PaddedInput

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
InternalImagePointerType itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_PaddedInput
private

Definition at line 120 of file itkRichardsonLucyDeconvolutionImageFilter.h.


The documentation for this class was generated from the following file: