ITK  5.2.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | List of all members
itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions > Class Template Reference

#include <itkTimeVaryingBSplineVelocityFieldTransform.h>

+ Inheritance diagram for itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >:
+ Collaboration diagram for itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using DerivativeType = typename Superclass::DerivativeType
 
using DisplacementFieldDirectionType = typename DisplacementFieldType::DirectionType
 
using DisplacementFieldPointType = typename DisplacementFieldType::PointType
 
using DisplacementFieldSizeType = typename DisplacementFieldType::SizeType
 
using DisplacementFieldSpacingType = typename DisplacementFieldType::SpacingType
 
using DisplacementFieldType = typename Superclass::DisplacementFieldType
 
using DisplacementVectorType = typename DisplacementFieldType::PixelType
 
using FixedParametersType = typename Superclass::FixedParametersType
 
using FixedParametersValueType = typename FixedParametersType::ValueType
 
using InterpolatorType = typename Superclass::InterpolatorType
 
using InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer
 
using NumberOfParametersType = typename Superclass::NumberOfParametersType
 
using ParametersType = typename Superclass::ParametersType
 
using ParametersValueType = typename ParametersType::ValueType
 
using Pointer = SmartPointer< Self >
 
using ScalarType = typename Superclass::ScalarType
 
using Self = TimeVaryingBSplineVelocityFieldTransform
 
using Superclass = VelocityFieldTransform< TParametersValueType, NDimensions >
 
using TimeVaryingVelocityFieldControlPointLatticePointer = typename VelocityFieldType::Pointer
 
using TimeVaryingVelocityFieldControlPointLatticeType = VelocityFieldType
 
using VelocityFieldDirectionType = typename VelocityFieldType::DirectionType
 
using VelocityFieldIntegratorType = typename Superclass::VelocityFieldInterpolatorType
 
using VelocityFieldPointType = typename VelocityFieldType::PointType
 
using VelocityFieldSizeType = typename VelocityFieldType::SizeType
 
using VelocityFieldSpacingType = typename VelocityFieldType::SpacingType
 
using VelocityFieldType = typename Superclass::VelocityFieldType
 
- Public Types inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions >
using ConstPointer = SmartPointer< const Self >
 
using DerivativeType = typename Superclass::DerivativeType
 
using DirectionType = typename VelocityFieldType::DirectionType
 
using DisplacementFieldPointer = typename DisplacementFieldType::Pointer
 
using DisplacementFieldType = typename Superclass::DisplacementFieldType
 
using FixedParametersType = typename Superclass::FixedParametersType
 
using FixedParametersValueType = typename Superclass::FixedParametersValueType
 
using IndexType = typename VelocityFieldType::IndexType
 
using InputPointType = typename Superclass::InputPointType
 
using InputVectorPixelType = typename Superclass::InputVectorPixelType
 
using InputVectorType = typename Superclass::InputVectorType
 
using InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer
 
using NumberOfParametersType = typename Superclass::NumberOfParametersType
 
using OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper< ScalarType, Dimension, VelocityFieldDimension >
 
using OutputPointType = typename Superclass::OutputPointType
 
using OutputVectorPixelType = typename Superclass::OutputVectorPixelType
 
using OutputVectorType = typename Superclass::OutputVectorType
 
using ParametersType = typename Superclass::ParametersType
 
using ParametersValueType = typename Superclass::ParametersValueType
 
using PixelType = typename VelocityFieldType::PixelType
 
using Pointer = SmartPointer< Self >
 
using PointType = typename VelocityFieldType::PointType
 
using RegionType = typename VelocityFieldType::RegionType
 
using ScalarType = typename Superclass::ScalarType
 
using Self = VelocityFieldTransform
 
using SizeType = typename VelocityFieldType::SizeType
 
using SpacingType = typename VelocityFieldType::SpacingType
 
using Superclass = DisplacementFieldTransform< TParametersValueType, NDimensions >
 
using TransformCategoryEnum = typename Superclass::TransformCategoryEnum
 
using VelocityFieldInterpolatorPointer = typename VelocityFieldInterpolatorType::Pointer
 
using VelocityFieldInterpolatorType = VectorInterpolateImageFunction< VelocityFieldType, ScalarType >
 
using VelocityFieldPointer = typename VelocityFieldType::Pointer
 
using VelocityFieldType = Image< OutputVectorType, VelocityFieldDimension >
 
- Public Types inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
using ConstPointer = SmartPointer< const Self >
 
using DerivativeType = typename Superclass::DerivativeType
 
using DirectionType = typename DisplacementFieldType::DirectionType
 
using DisplacementFieldConstPointer = typename DisplacementFieldType::ConstPointer
 
using DisplacementFieldPointer = typename DisplacementFieldType::Pointer
 
using DisplacementFieldType = Image< OutputVectorType, Dimension >
 
using FixedParametersType = typename Superclass::FixedParametersType
 
using FixedParametersValueType = typename Superclass::FixedParametersValueType
 
using IndexType = typename DisplacementFieldType::IndexType
 
using InputCovariantVectorType = typename Superclass::InputCovariantVectorType
 
using InputDiffusionTensor3DType = typename Superclass::InputDiffusionTensor3DType
 
using InputPointType = typename Superclass::InputPointType
 
using InputTensorEigenVectorType = CovariantVector< ScalarType, InputDiffusionTensor3DType::Dimension >
 
using InputVectorPixelType = typename Superclass::InputVectorPixelType
 
using InputVectorType = typename Superclass::InputVectorType
 
using InputVnlVectorType = typename Superclass::InputVnlVectorType
 
using InterpolatorType = VectorInterpolateImageFunction< DisplacementFieldType, ScalarType >
 
using InverseJacobianPositionType = typename Superclass::InverseJacobianPositionType
 
using InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer
 
using JacobianPositionType = typename Superclass::JacobianPositionType
 
using JacobianType = typename Superclass::JacobianType
 
using NumberOfParametersType = typename Superclass::NumberOfParametersType
 
using OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper< ScalarType, OutputVectorType::Dimension, Dimension >
 
using OutputCovariantVectorType = typename Superclass::OutputCovariantVectorType
 
using OutputDiffusionTensor3DType = typename Superclass::OutputDiffusionTensor3DType
 
using OutputPointType = typename Superclass::OutputPointType
 
using OutputTensorEigenVectorType = CovariantVector< ScalarType, OutputDiffusionTensor3DType::Dimension >
 
using OutputVectorPixelType = typename Superclass::OutputVectorPixelType
 
using OutputVectorType = typename Superclass::OutputVectorType
 
using OutputVnlVectorType = typename Superclass::OutputVnlVectorType
 
using ParametersType = typename Superclass::ParametersType
 
using ParametersValueType = typename Superclass::ParametersValueType
 
using PixelType = typename DisplacementFieldType::PixelType
 
using Pointer = SmartPointer< Self >
 
using PointType = typename DisplacementFieldType::PointType
 
using RegionType = typename DisplacementFieldType::RegionType
 
using ScalarType = typename Superclass::ScalarType
 
using Self = DisplacementFieldTransform
 
using SizeType = typename DisplacementFieldType::SizeType
 
using SpacingType = typename DisplacementFieldType::SpacingType
 
using Superclass = Transform< TParametersValueType, NDimensions, NDimensions >
 
using TransformCategoryEnum = typename Superclass::TransformCategoryEnum
 
- Public Types inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
using ConstPointer = SmartPointer< const Self >
 
using DerivativeType = Array< ParametersValueType >
 
using DirectionChangeMatrix = Matrix< double, Self::OutputSpaceDimension, Self::InputSpaceDimension >
 
using FixedParametersType = typename Superclass::FixedParametersType
 
using FixedParametersValueType = typename Superclass::FixedParametersValueType
 
using InputCovariantVectorType = CovariantVector< TParametersValueType, NInputDimensions >
 
using InputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType >
 
using InputDirectionMatrix = Matrix< double, Self::InputSpaceDimension, Self::InputSpaceDimension >
 
using InputPointType = Point< TParametersValueType, NInputDimensions >
 
using InputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NInputDimensions >
 
using InputVectorPixelType = VariableLengthVector< TParametersValueType >
 
using InputVectorType = Vector< TParametersValueType, NInputDimensions >
 
using InputVnlVectorType = vnl_vector_fixed< TParametersValueType, NInputDimensions >
 
using InverseJacobianPositionType = vnl_matrix_fixed< ParametersValueType, NInputDimensions, NOutputDimensions >
 
using InverseTransformBasePointer = typename InverseTransformBaseType::Pointer
 
using InverseTransformBaseType = Transform< TParametersValueType, NOutputDimensions, NInputDimensions >
 
using JacobianPositionType = vnl_matrix_fixed< ParametersValueType, NOutputDimensions, NInputDimensions >
 
using JacobianType = Array2D< ParametersValueType >
 
using MatrixType = Matrix< TParametersValueType, Self::OutputSpaceDimension, Self::InputSpaceDimension >
 
using NumberOfParametersType = typename Superclass::NumberOfParametersType
 
using OutputCovariantVectorType = CovariantVector< TParametersValueType, NOutputDimensions >
 
using OutputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType >
 
using OutputDirectionMatrix = Matrix< double, Self::OutputSpaceDimension, Self::OutputSpaceDimension >
 
using OutputPointType = Point< TParametersValueType, NOutputDimensions >
 
using OutputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NOutputDimensions >
 
using OutputVectorPixelType = VariableLengthVector< TParametersValueType >
 
using OutputVectorType = Vector< TParametersValueType, NOutputDimensions >
 
using OutputVnlVectorType = vnl_vector_fixed< TParametersValueType, NOutputDimensions >
 
using ParametersType = typename Superclass::ParametersType
 
using ParametersValueType = typename Superclass::ParametersValueType
 
using Pointer = SmartPointer< Self >
 
using ScalarType = ParametersValueType
 
using Self = Transform
 
using Superclass = TransformBaseTemplate< TParametersValueType >
 
using TransformCategoryEnum = typename Superclass::TransformCategoryEnum
 
- Public Types inherited from itk::TransformBaseTemplate< TParametersValueType >
using ConstPointer = SmartPointer< const Self >
 
using FixedParametersType = OptimizerParameters< FixedParametersValueType >
 
using FixedParametersValueType = double
 
using NumberOfParametersType = IdentifierType
 
using ParametersType = OptimizerParameters< ParametersValueType >
 
using ParametersValueType = TParametersValueType
 
using Pointer = SmartPointer< Self >
 
using Self = TransformBaseTemplate
 
using Superclass = Object
 
using TransformCategoryEnum = TransformBaseTemplateEnums::TransformCategory
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual const char * GetNameOfClass () const
 
VelocityFieldTypeGetTimeVaryingVelocityFieldControlPointLattice ()
 
void IntegrateVelocityField () override
 
virtual void SetTimeVaryingVelocityFieldControlPointLattice (VelocityFieldType *fieldLattice)
 
void UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override
 
- Public Member Functions inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions >
virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual void SetVelocityField (VelocityFieldType *)
 
virtual VelocityFieldTypeGetModifiableVelocityField ()
 
virtual const VelocityFieldTypeGetVelocityField () const
 
void SetFixedParameters (const FixedParametersType &) override
 
virtual void SetVelocityFieldInterpolator (VelocityFieldInterpolatorType *)
 
virtual VelocityFieldInterpolatorTypeGetModifiableVelocityFieldInterpolator ()
 
virtual const VelocityFieldInterpolatorTypeGetVelocityFieldInterpolator () const
 
virtual const unsigned long & GetVelocityFieldSetTime () const
 
void SetDisplacementField (DisplacementFieldType *displacementField) override
 
void UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override
 
bool GetInverse (Self *inverse) const
 
InverseTransformBasePointer GetInverseTransform () const override
 
virtual void SetLowerTimeBound (ScalarType _arg)
 
virtual ScalarType GetLowerTimeBound () const
 
virtual void SetUpperTimeBound (ScalarType _arg)
 
virtual ScalarType GetUpperTimeBound () const
 
virtual void SetNumberOfIntegrationSteps (unsigned int _arg)
 
virtual unsigned int GetNumberOfIntegrationSteps () const
 
- Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
virtual DisplacementFieldTypeGetModifiableDisplacementField ()
 
virtual const DisplacementFieldTypeGetDisplacementField () const
 
virtual void SetInverseDisplacementField (DisplacementFieldType *inverseDisplacementField)
 
virtual DisplacementFieldTypeGetModifiableInverseDisplacementField ()
 
virtual const DisplacementFieldTypeGetInverseDisplacementField () const
 
virtual void SetInterpolator (InterpolatorType *interpolator)
 
virtual InterpolatorTypeGetModifiableInterpolator ()
 
virtual const InterpolatorTypeGetInterpolator () const
 
virtual void SetInverseInterpolator (InterpolatorType *interpolator)
 
virtual InterpolatorTypeGetModifiableInverseInterpolator ()
 
virtual const InterpolatorTypeGetInverseInterpolator () const
 
virtual const ModifiedTimeTypeGetDisplacementFieldSetTime () const
 
OutputPointType TransformPoint (const InputPointType &thisPoint) const override
 
OutputVectorType TransformVector (const InputVectorType &) const override
 
OutputVectorPixelType TransformVector (const InputVectorPixelType &) const override
 
OutputVnlVectorType TransformVector (const InputVnlVectorType &) const override
 
OutputDiffusionTensor3DType TransformDiffusionTensor (const InputDiffusionTensor3DType &) const
 
OutputVectorPixelType TransformDiffusionTensor (const InputVectorPixelType &) const
 
OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const override
 
OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &) const override
 
void SetParameters (const ParametersType &params) override
 
void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &j) const override
 
virtual void ComputeJacobianWithRespectToParameters (const IndexType &, JacobianType &j) const
 
void ComputeJacobianWithRespectToPosition (const InputPointType &x, JacobianPositionType &j) const override
 
void ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, InverseJacobianPositionType &j) const override
 
virtual void ComputeJacobianWithRespectToPosition (const IndexType &x, JacobianPositionType &j) const
 
virtual void GetInverseJacobianOfForwardFieldWithRespectToPosition (const InputPointType &point, JacobianPositionType &jacobian, bool useSVD=false) const
 
virtual void GetInverseJacobianOfForwardFieldWithRespectToPosition (const IndexType &index, JacobianPositionType &jacobian, bool useSVD=false) const
 
void UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override
 
bool GetInverse (Self *inverse) const
 
virtual void SetIdentity ()
 
TransformCategoryEnum GetTransformCategory () const override
 
NumberOfParametersType GetNumberOfLocalParameters () const override
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
void CopyInFixedParameters (const FixedParametersValueType *const begin, const FixedParametersValueType *const end) override
 
void CopyInParameters (const ParametersValueType *const begin, const ParametersValueType *const end) override
 
const FixedParametersTypeGetFixedParameters () const override
 
unsigned int GetInputSpaceDimension () const override
 
bool GetInverse (Self *) const
 
virtual NumberOfParametersType GetNumberOfFixedParameters () const
 
NumberOfParametersType GetNumberOfParameters () const override
 
unsigned int GetOutputSpaceDimension () const override
 
const ParametersTypeGetParameters () const override
 
TransformCategoryEnum GetTransformCategory () const override
 
std::string GetTransformTypeAsString () const override
 
virtual bool IsLinear () const
 
 itkCloneMacro (Self)
 
void SetParametersByValue (const ParametersType &p) override
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &vector, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &vector, const InputPointType &point) const
 
virtual OutputDiffusionTensor3DType TransformDiffusionTensor3D (const InputDiffusionTensor3DType &) const
 
virtual OutputDiffusionTensor3DType TransformDiffusionTensor3D (const InputDiffusionTensor3DType &tensor, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformDiffusionTensor3D (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformDiffusionTensor3D (const InputVectorPixelType &tensor, const InputPointType &point) const
 
virtual OutputPointType TransformPoint (const InputPointType &) const=0
 
virtual OutputSymmetricSecondRankTensorType TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &) const
 
virtual OutputSymmetricSecondRankTensorType TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &tensor, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformSymmetricSecondRankTensor (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformSymmetricSecondRankTensor (const InputVectorPixelType &tensor, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &vector, const InputPointType &point) const
 
virtual OutputVectorType TransformVector (const InputVectorType &) const
 
virtual OutputVectorType TransformVector (const InputVectorType &vector, const InputPointType &point) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &vector, const InputPointType &point) const
 
virtual void UpdateTransformParameters (const DerivativeType &update, ParametersValueType factor=1.0)
 
virtual void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const=0
 
virtual void ComputeJacobianWithRespectToParametersCachedTemporaries (const InputPointType &p, JacobianType &jacobian, JacobianType &) const
 
virtual void ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianPositionType &) const
 
 itkLegacyMacro (virtual void ComputeJacobianWithRespectToPosition(const InputPointType &x, JacobianType &jacobian) const)
 
 itkLegacyMacro (virtual void ComputeInverseJacobianWithRespectToPosition(const InputPointType &x, JacobianType &jacobian) const)
 
virtual void ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, InverseJacobianPositionType &jacobian) const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int Dimension = NDimensions
 
static constexpr unsigned int VelocityFieldDimension = NDimensions + 1
 
- Static Public Attributes inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions >
static constexpr unsigned int Dimension = NDimensions
 
static constexpr unsigned int VelocityFieldDimension = NDimensions + 1
 
- Static Public Attributes inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
static constexpr unsigned int Dimension = NDimensions
 
- Static Public Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
static constexpr unsigned int InputSpaceDimension
 
static constexpr unsigned int OutputSpaceDimension
 
unsigned int m_SplineOrder
 
bool m_TemporalPeriodicity
 
VelocityFieldPointType m_VelocityFieldOrigin
 
VelocityFieldSpacingType m_VelocityFieldSpacing
 
VelocityFieldDirectionType m_VelocityFieldDirection
 
VelocityFieldSizeType m_VelocityFieldSize
 
virtual void SetVelocityFieldOrigin (VelocityFieldPointType _arg)
 
virtual VelocityFieldPointType GetVelocityFieldOrigin () const
 
virtual void SetVelocityFieldSpacing (VelocityFieldSpacingType _arg)
 
virtual VelocityFieldSpacingType GetVelocityFieldSpacing () const
 
virtual void SetVelocityFieldSize (VelocityFieldSizeType _arg)
 
virtual VelocityFieldSizeType GetVelocityFieldSize () const
 
virtual void SetVelocityFieldDirection (VelocityFieldDirectionType _arg)
 
virtual VelocityFieldDirectionType GetVelocityFieldDirection () const
 
virtual void SetSplineOrder (unsigned int _arg)
 
virtual unsigned int GetSplineOrder () const
 
 TimeVaryingBSplineVelocityFieldTransform ()
 
 ~TimeVaryingBSplineVelocityFieldTransform () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 

Additional Inherited Members

- Protected Member Functions inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions >
 VelocityFieldTransform ()
 
 ~VelocityFieldTransform () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
LightObject::Pointer InternalClone () const override
 
DisplacementFieldType::Pointer CopyDisplacementField (const DisplacementFieldType *) const
 
- Protected Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
 DisplacementFieldTransform ()
 
 ~DisplacementFieldTransform () override=default
 
- Protected Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
LightObject::Pointer InternalClone () const override
 
 Transform ()
 
 Transform (NumberOfParametersType NumberOfParameters)
 
 ~Transform () override=default
 
OutputDiffusionTensor3DType PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType &, const InverseJacobianPositionType &) const
 
- Protected Member Functions inherited from itk::TransformBaseTemplate< TParametersValueType >
 TransformBaseTemplate ()=default
 
 ~TransformBaseTemplate () override=default
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
- Protected Member Functions inherited from itk::LightObject
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 
- Protected Attributes inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions >
ScalarType m_LowerTimeBound
 
ScalarType m_UpperTimeBound
 
unsigned int m_NumberOfIntegrationSteps
 
VelocityFieldPointer m_VelocityField
 
VelocityFieldInterpolatorType::Pointer m_VelocityFieldInterpolator
 
unsigned long m_VelocityFieldSetTime
 
- Protected Attributes inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
DisplacementFieldType::Pointer m_DisplacementField
 
DisplacementFieldType::Pointer m_InverseDisplacementField
 
InterpolatorType::Pointer m_Interpolator
 
InterpolatorType::Pointer m_InverseInterpolator
 
ModifiedTimeType m_DisplacementFieldSetTime { 0 }
 
JacobianType m_IdentityJacobian
 
- Protected Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
ParametersType m_Parameters
 
FixedParametersType m_FixedParameters
 
DirectionChangeMatrix m_DirectionChange
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

template<typename TParametersValueType, unsigned int NDimensions>
class itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >

Integrate a time-varying velocity field represented by a B-spline control point lattice.

Diffeomorphisms are topology-preserving mappings that are useful for describing biologically plausible deformations. Mathematically, a diffeomorphism, $ \phi $, is generated from a time-varying velocity field, v, as described by the integral equation:

\[ \phi(t_b) = \phi(t_a) + \int_{t_a}^{t_b} v(\phi(t),t) dt \]

In typical registration applications it is computationally more efficient to sample the B-spline transform to its corresponding displacement field. Therefore, the user needs to specify the domain parameters of that displacement field using the following functions:

It's important that these parameters match up with the fixed parameters of this transform which are defined as the parameters of the (N+1)-D B-spline grid representing the continuous velocity field. This control point lattice is set using SetTimeVaryingVelocityFieldControlPointLattice() or it can be created by setting the fixed parameters.

Note: For readability of the code, it is important to note that we store the control point lattice in the m_VelocityField variable since they are of the same type. It's only when we call IntegrateVelocityField() that a sampled velocity field is created from the control point lattice.

Author
Nick Tustison
Brian Avants

Definition at line 68 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

Member Typedef Documentation

◆ ConstPointer

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ConstPointer = SmartPointer<const Self>

◆ DerivativeType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DerivativeType = typename Superclass::DerivativeType

Derivative type

Definition at line 108 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ DisplacementFieldDirectionType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldDirectionType = typename DisplacementFieldType::DirectionType

◆ DisplacementFieldPointType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldPointType = typename DisplacementFieldType::PointType

◆ DisplacementFieldSizeType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldSizeType = typename DisplacementFieldType::SizeType

◆ DisplacementFieldSpacingType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldSpacingType = typename DisplacementFieldType::SpacingType

◆ DisplacementFieldType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldType = typename Superclass::DisplacementFieldType

Field types.

Definition at line 94 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ DisplacementVectorType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementVectorType = typename DisplacementFieldType::PixelType

◆ FixedParametersType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersType = typename Superclass::FixedParametersType

◆ FixedParametersValueType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersValueType = typename FixedParametersType::ValueType

◆ InterpolatorType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::InterpolatorType = typename Superclass::InterpolatorType

Interpolator types.

Definition at line 90 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ InverseTransformBasePointer

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer

InverseTransform type.

Definition at line 87 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ NumberOfParametersType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::NumberOfParametersType = typename Superclass::NumberOfParametersType

◆ ParametersType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ParametersType = typename Superclass::ParametersType

Type of the input parameters.

Definition at line 101 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ ParametersValueType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ParametersValueType = typename ParametersType::ValueType

◆ Pointer

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Pointer = SmartPointer<Self>

◆ ScalarType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ScalarType = typename Superclass::ScalarType

Scalar type.

Definition at line 98 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ Self

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Self = TimeVaryingBSplineVelocityFieldTransform

Standard class type aliases.

Definition at line 75 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ Superclass

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Superclass = VelocityFieldTransform<TParametersValueType, NDimensions>

◆ TimeVaryingVelocityFieldControlPointLatticePointer

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::TimeVaryingVelocityFieldControlPointLatticePointer = typename VelocityFieldType::Pointer

◆ TimeVaryingVelocityFieldControlPointLatticeType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::TimeVaryingVelocityFieldControlPointLatticeType = VelocityFieldType

◆ VelocityFieldDirectionType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldDirectionType = typename VelocityFieldType::DirectionType

◆ VelocityFieldIntegratorType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldIntegratorType = typename Superclass::VelocityFieldInterpolatorType

◆ VelocityFieldPointType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldPointType = typename VelocityFieldType::PointType

◆ VelocityFieldSizeType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldSizeType = typename VelocityFieldType::SizeType

◆ VelocityFieldSpacingType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldSpacingType = typename VelocityFieldType::SpacingType

◆ VelocityFieldType

template<typename TParametersValueType , unsigned int NDimensions>
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldType = typename Superclass::VelocityFieldType

Constructor & Destructor Documentation

◆ TimeVaryingBSplineVelocityFieldTransform()

template<typename TParametersValueType , unsigned int NDimensions>
itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::TimeVaryingBSplineVelocityFieldTransform ( )
protected

Set/Get sampled velocity field origin

◆ ~TimeVaryingBSplineVelocityFieldTransform()

template<typename TParametersValueType , unsigned int NDimensions>
itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::~TimeVaryingBSplineVelocityFieldTransform ( )
overrideprotecteddefault

Set/Get sampled velocity field origin

Member Function Documentation

◆ CreateAnother()

template<typename TParametersValueType , unsigned int NDimensions>
virtual::itk::LightObject::Pointer itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

◆ GetNameOfClass()

template<typename TParametersValueType , unsigned int NDimensions>
virtual const char* itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::VelocityFieldTransform< TParametersValueType, NDimensions >.

◆ GetSplineOrder()

template<typename TParametersValueType , unsigned int NDimensions>
virtual unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetSplineOrder ( ) const
virtual

Set/Get sampled velocity field origin

◆ GetTimeVaryingVelocityFieldControlPointLattice()

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldType* itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetTimeVaryingVelocityFieldControlPointLattice ( )
inline

Get the time-varying velocity field control point lattice.

Definition at line 132 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ GetVelocityFieldDirection()

template<typename TParametersValueType , unsigned int NDimensions>
virtual VelocityFieldDirectionType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldDirection ( ) const
virtual

Set/Get sampled velocity field origin

◆ GetVelocityFieldOrigin()

template<typename TParametersValueType , unsigned int NDimensions>
virtual VelocityFieldPointType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldOrigin ( ) const
virtual

Set/Get sampled velocity field origin

◆ GetVelocityFieldSize()

template<typename TParametersValueType , unsigned int NDimensions>
virtual VelocityFieldSizeType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldSize ( ) const
virtual

Set/Get sampled velocity field origin

◆ GetVelocityFieldSpacing()

template<typename TParametersValueType , unsigned int NDimensions>
virtual VelocityFieldSpacingType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldSpacing ( ) const
virtual

Set/Get sampled velocity field origin

◆ IntegrateVelocityField()

template<typename TParametersValueType , unsigned int NDimensions>
void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::IntegrateVelocityField ( )
overridevirtual

Trigger the computation of the displacement field by integrating the time-varying velocity field.

Reimplemented from itk::VelocityFieldTransform< TParametersValueType, NDimensions >.

◆ New()

template<typename TParametersValueType , unsigned int NDimensions>
static Pointer itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::New ( )
static

New macro for creation of through a Smart Pointer

◆ PrintSelf()

template<typename TParametersValueType , unsigned int NDimensions>
void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Set/Get sampled velocity field origin

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

◆ SetSplineOrder()

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::SetSplineOrder ( unsigned int  _arg)
virtual

Set/Get the spline order.

◆ SetTimeVaryingVelocityFieldControlPointLattice()

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::SetTimeVaryingVelocityFieldControlPointLattice ( VelocityFieldType fieldLattice)
inlinevirtual

Set the time-varying velocity field control point lattice.

Definition at line 139 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ SetVelocityFieldDirection()

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityFieldDirection ( VelocityFieldDirectionType  _arg)
virtual

Set/Get sampled velocity field direction

◆ SetVelocityFieldOrigin()

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityFieldOrigin ( VelocityFieldPointType  _arg)
virtual

Set/Get sampled velocity field origin

◆ SetVelocityFieldSize()

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityFieldSize ( VelocityFieldSizeType  _arg)
virtual

Set/Get sampled velocity field size

◆ SetVelocityFieldSpacing()

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityFieldSpacing ( VelocityFieldSpacingType  _arg)
virtual

Set/Get sampled velocity field spacing

◆ UpdateTransformParameters()

template<typename TParametersValueType , unsigned int NDimensions>
void itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::UpdateTransformParameters ( const DerivativeType update,
ScalarType  factor = 1.0 
)
override

Update the transform's parameters by the adding values in update to current parameter values. We assume update is of the same length as Parameters. Throw exception otherwise. factor is a scalar multiplier for each value in update. SetParameters is called at the end of this method, to allow transforms to perform any required operations on the update parameters, typically a conversion to member variables for use in TransformPoint.

Member Data Documentation

◆ Dimension

template<typename TParametersValueType , unsigned int NDimensions>
constexpr unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Dimension = NDimensions
staticconstexpr

Dimension of the domain spaces.

Definition at line 111 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ m_SplineOrder

template<typename TParametersValueType , unsigned int NDimensions>
unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::m_SplineOrder
private

Set/Get sampled velocity field origin

Definition at line 190 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ m_TemporalPeriodicity

template<typename TParametersValueType , unsigned int NDimensions>
bool itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::m_TemporalPeriodicity
private

Set/Get sampled velocity field origin

Definition at line 191 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ m_VelocityFieldDirection

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldDirectionType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldDirection
private

Set/Get sampled velocity field origin

Definition at line 195 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ m_VelocityFieldOrigin

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldPointType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldOrigin
private

Set/Get sampled velocity field origin

Definition at line 193 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ m_VelocityFieldSize

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldSizeType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldSize
private

Set/Get sampled velocity field origin

Definition at line 196 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ m_VelocityFieldSpacing

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldSpacingType itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldSpacing
private

Set/Get sampled velocity field origin

Definition at line 194 of file itkTimeVaryingBSplineVelocityFieldTransform.h.

◆ VelocityFieldDimension

template<typename TParametersValueType , unsigned int NDimensions>
constexpr unsigned int itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldDimension = NDimensions + 1
staticconstexpr

Dimension of the time varying velocity field.

Definition at line 114 of file itkTimeVaryingBSplineVelocityFieldTransform.h.


The documentation for this class was generated from the following file: