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itk::MahalanobisDistanceThresholdImageFunction

itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep > Class Template Reference
[Image Functions]

#include <itkMahalanobisDistanceThresholdImageFunction.h>

Inheritance diagram for itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >:

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Collaboration diagram for itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >:

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List of all members.

Detailed Description

template<class TInputImage, class TCoordRep = float>
class itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >

Returns true if the pixel value of a vector image has a Mahalanobis distance below the value specified by the threshold.

This ImageFunction returns true if the pixel value of a vector image has a Mahalanobis distance below the value specided by the threshold. The Mahalanobis distance is computed with the MahalanobisDistanceMembershipFunction class which has to be initialized with the mean an covariance to be used. This class is intended to be used only with images whose pixel type is a vector (array).

The input image is set via method SetInputImage().

Methods Evaluate, EvaluateAtIndex and EvaluateAtContinuousIndex respectively evaluate the function at an geometric point, image index and continuous image index.

Definition at line 47 of file itkMahalanobisDistanceThresholdImageFunction.h.

Public Types

typedef SmartPointer< const
Self > 		ConstPointer
typedef Superclass::ContinuousIndexType ContinuousIndexType
typedef TCoordRep CoordRepType
typedef vnl_matrix< double > CovarianceMatrixType
typedef Superclass::IndexType IndexType
typedef InputImageType::ConstPointer InputImageConstPointer
typedef Superclass::InputImageType InputImageType
typedef InputImageType::PixelType InputPixelType
typedef TInput InputType
typedef vnl_vector< double > MeanVectorType
typedef bool OutputType
typedef TInputImage::PixelType PixelType
typedef SmartPointer< Self > Pointer
typedef Superclass::PointType PointType
typedef MahalanobisDistanceThresholdImageFunction Self
typedef ImageFunction< TInputImage,
bool, TCoordRep > 		Superclass

Public Member Functions

void ConvertContinuousIndexToNearestIndex (const ContinuousIndexType &cindex, IndexType &index) const
void ConvertPointToContinousIndex (const PointType &point, ContinuousIndexType &cindex) const
void ConvertPointToContinuousIndex (const PointType &point, ContinuousIndexType &cindex) const
void ConvertPointToNearestIndex (const PointType &point, IndexType &index) const
virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
virtual void Delete ()
virtual OutputType Evaluate (const InputType &input) const=0
virtual bool Evaluate (const PointType &point) const=0
virtual bool Evaluate (const PointType &point) const
virtual bool EvaluateAtContinuousIndex (const ContinuousIndexType &index) const=0
virtual bool EvaluateAtContinuousIndex (const ContinuousIndexType &index) const
virtual bool EvaluateAtIndex (const IndexType &index) const=0
virtual bool EvaluateAtIndex (const IndexType &index) const
virtual double EvaluateDistance (const PointType &point) const
virtual double EvaluateDistanceAtIndex (const IndexType &index) const
Command * GetCommand (unsigned long tag)
bool GetDebug () const
virtual const ContinuousIndexType & GetEndContinuousIndex ()
virtual const IndexType & GetEndIndex ()
const InputImageType * GetInputImage () const
const MetaDataDictionary & GetMetaDataDictionary (void) const
MetaDataDictionary & GetMetaDataDictionary (void)
virtual unsigned long GetMTime () const
virtual const char * GetNameOfClass () const
virtual int GetReferenceCount () const
virtual const ContinuousIndexType & GetStartContinuousIndex ()
virtual const IndexType & GetStartIndex ()
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &) const
void InvokeEvent (const EventObject &)
virtual bool IsInsideBuffer (const PointType &point) const
virtual bool IsInsideBuffer (const ContinuousIndexType &index) const
virtual bool IsInsideBuffer (const IndexType &index) const
 itkStaticConstMacro (ImageDimension, unsigned int, TInputImage::ImageDimension)
 itkStaticConstMacro (ImageDimension, unsigned int, Superclass::ImageDimension)
virtual void Modified () const
void Print (std::ostream &os, Indent indent=0) const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
virtual void SetInputImage (const InputImageType *ptr)
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
unsigned long AddObserver (const EventObject &event, Command *) const
unsigned long AddObserver (const EventObject &event, Command *)
const CovarianceMatrixType & GetCovariance () const
void SetCovariance (const CovarianceMatrixType &cov)
const MeanVectorType & GetMean () const
void SetMean (const MeanVectorType &mean)
virtual const double & GetThreshold ()
virtual void SetThreshold (double _arg)

Static Public Member Functions

static void BreakOnError ()
static Pointer New ()
static bool GetGlobalWarningDisplay ()
static void GlobalWarningDisplayOff ()
static void GlobalWarningDisplayOn ()
static void SetGlobalWarningDisplay (bool flag)

Protected Types

typedef int InternalReferenceCountType

Protected Member Functions

 MahalanobisDistanceThresholdImageFunction ()
bool PrintObservers (std::ostream &os, Indent indent) const
void PrintSelf (std::ostream &os, Indent indent) const
 ~MahalanobisDistanceThresholdImageFunction ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const

Protected Attributes

ContinuousIndexType m_EndContinuousIndex
IndexType m_EndIndex
InputImageConstPointer m_Image
InternalReferenceCountType m_ReferenceCount
SimpleFastMutexLock m_ReferenceCountLock
ContinuousIndexType m_StartContinuousIndex
IndexType m_StartIndex

Member Typedef Documentation

template<class TInputImage, class TCoordRep = float>
typedef SmartPointer<const Self> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::ConstPointer

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 55 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef Superclass::ContinuousIndexType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::ContinuousIndexType

ContinuousIndex typedef support.

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 79 of file itkMahalanobisDistanceThresholdImageFunction.h.

typedef TCoordRep itk::ImageFunction< TInputImage , bool , TCoordRep >::CoordRepType [inherited]

CoordRepType typedef support.

Definition at line 94 of file itkImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef vnl_matrix<double> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::CovarianceMatrixType

Type used to represent the Covariance matrix of the vector population

Definition at line 82 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef Superclass::IndexType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::IndexType

Index typedef support.

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 76 of file itkMahalanobisDistanceThresholdImageFunction.h.

typedef InputImageType::ConstPointer itk::ImageFunction< TInputImage , bool , TCoordRep >::InputImageConstPointer [inherited]

InputImagePointer typedef support

Definition at line 88 of file itkImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef Superclass::InputImageType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::InputImageType

InputImageType typedef support.

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 61 of file itkMahalanobisDistanceThresholdImageFunction.h.

typedef InputImageType::PixelType itk::ImageFunction< TInputImage , bool , TCoordRep >::InputPixelType [inherited]

InputPixel typedef support

Definition at line 85 of file itkImageFunction.h.

template<class TInput, class TOutput>
typedef TInput itk::FunctionBase< TInput, TOutput >::InputType [inherited]

Input type

Reimplemented in itk::BinaryThresholdSpatialFunction< TFunction >, itk::ConicShellInteriorExteriorSpatialFunction< VDimension, TInput >, itk::EllipsoidInteriorExteriorSpatialFunction< VDimension, TInput >, itk::FiniteCylinderSpatialFunction< VDimension, TInput >, itk::FrustumSpatialFunction< VImageDimension, TInput >, itk::GaussianDerivativeSpatialFunction< TOutput, VImageDimension, TInput >, itk::GaussianSpatialFunction< TOutput, VImageDimension, TInput >, itk::InteriorExteriorSpatialFunction< VDimension, TInput >, itk::PCAShapeSignedDistanceFunction< TCoordRep, VSpaceDimension, TImage >, itk::ShapeSignedDistanceFunction< TCoordRep, VSpaceDimension >, itk::SpatialFunction< TOutput, VImageDimension, TInput >, itk::SphereSignedDistanceFunction< TCoordRep, VSpaceDimension >, itk::SphereSpatialFunction< VImageDimension, TInput >, itk::SymmetricEllipsoidInteriorExteriorSpatialFunction< VDimension, TInput >, itk::TorusInteriorExteriorSpatialFunction< VDimension, TInput >, itk::Statistics::TransferFunctionBase< ScalarType >, itk::QuadEdgeMeshBoundaryEdgesMeshFunction< TMesh >, itk::InteriorExteriorSpatialFunction< VImageDimension, TInput >, itk::SpatialFunction< double, VSpaceDimension, itk::Point< TCoordRep, VSpaceDimension > >, itk::SpatialFunction< bool,::itk::GetImageDimension< TFunction >::ImageDimension, TFunction::InputType >, and itk::SpatialFunction< bool, VDimension, TInput >.

Definition at line 54 of file itkFunctionBase.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<class TInputImage, class TCoordRep = float>
typedef vnl_vector<double> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::MeanVectorType

Type used to represent the Mean Vector of the vector population

Definition at line 85 of file itkMahalanobisDistanceThresholdImageFunction.h.

typedef bool itk::ImageFunction< TInputImage , bool , TCoordRep >::OutputType [inherited]

OutputType typedef support.

Reimplemented from itk::FunctionBase< TInput, TOutput >.

Reimplemented in itk::NeighborhoodBinaryThresholdImageFunction< TInputImage, TCoordRep >.

Definition at line 91 of file itkImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef TInputImage::PixelType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PixelType

Typedef to describe the type of pixel.

Definition at line 67 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef SmartPointer<Self> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Pointer

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 54 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef Superclass::PointType itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PointType

Point typedef support.

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 73 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef MahalanobisDistanceThresholdImageFunction itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Self

Standard class typedefs.

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 52 of file itkMahalanobisDistanceThresholdImageFunction.h.

template<class TInputImage, class TCoordRep = float>
typedef ImageFunction<TInputImage,bool,TCoordRep> itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Superclass

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

Definition at line 53 of file itkMahalanobisDistanceThresholdImageFunction.h.

Constructor & Destructor Documentation

template<class TInputImage, class TCoordRep = float>
itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::MahalanobisDistanceThresholdImageFunction (  )  [protected]

template<class TInputImage, class TCoordRep = float>
itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::~MahalanobisDistanceThresholdImageFunction (  )  [inline, protected]

Definition at line 155 of file itkMahalanobisDistanceThresholdImageFunction.h.

Member Function Documentation

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) const [inherited]

unsigned long itk::Object::AddObserver ( const EventObject &  event,
Command *   
) [inherited]

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

static void itk::LightObject::BreakOnError (  )  [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

void itk::ImageFunction< TInputImage , bool , TCoordRep >::ConvertContinuousIndexToNearestIndex ( const ContinuousIndexType &  cindex,
IndexType &  index 
) const [inline, inherited]

Convert continuous index to nearest index.

Definition at line 210 of file itkImageFunction.h.

void itk::ImageFunction< TInputImage , bool , TCoordRep >::ConvertPointToContinousIndex ( const PointType &  point,
ContinuousIndexType &  cindex 
) const [inline, inherited]

Convert point to continuous index

Definition at line 191 of file itkImageFunction.h.

void itk::ImageFunction< TInputImage , bool , TCoordRep >::ConvertPointToContinuousIndex ( const PointType &  point,
ContinuousIndexType &  cindex 
) const [inline, inherited]

Convert point to continuous index

Definition at line 203 of file itkImageFunction.h.

void itk::ImageFunction< TInputImage , bool , TCoordRep >::ConvertPointToNearestIndex ( const PointType &  point,
IndexType &  index 
) const [inline, inherited]

Convert point to nearest index.

Definition at line 181 of file itkImageFunction.h.

virtual LightObject::Pointer itk::Object::CreateAnother (  )  const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

virtual void itk::Object::DebugOff (  )  const [virtual, inherited]

Turn debugging output off.

virtual void itk::Object::DebugOn (  )  const [virtual, inherited]

Turn debugging output on.

virtual void itk::LightObject::Delete (  )  [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

template<class TInput, class TOutput>
virtual OutputType itk::FunctionBase< TInput, TOutput >::Evaluate ( const InputType &  input  )  const [pure virtual, inherited]

Evaluate at the specified input position

Implemented in itk::BinaryThresholdSpatialFunction< TFunction >, itk::BSplineDerivativeKernelFunction< VSplineOrder >, itk::BSplineKernelFunction< VSplineOrder >, itk::GaussianDerivativeSpatialFunction< TOutput, VImageDimension, TInput >, itk::GaussianKernelFunction, itk::GaussianSpatialFunction< TOutput, VImageDimension, TInput >, itk::KernelFunction, itk::Statistics::ErrorFunctionBase< TMeasurementVector, TTargetVector >, itk::Statistics::GaussianRadialBasisFunction< ScalarType >, itk::Statistics::GaussianTransferFunction< ScalarType >, itk::Statistics::HardLimitTransferFunction< ScalarType >, itk::Statistics::IdentityTransferFunction< ScalarType >, itk::Statistics::InputFunctionBase< TMeasurementVector, TTargetVector >, itk::Statistics::LogSigmoidTransferFunction< ScalarType >, itk::Statistics::MeanSquaredErrorFunction< TMeasurementVector, ScalarType >, itk::Statistics::MultiquadricRadialBasisFunction< ScalarType >, itk::Statistics::NNetDistanceMetricBase< TMeasurementVector >, itk::Statistics::ProductInputFunction< TMeasurementVector, ScalarType >, itk::Statistics::RadialBasisFunctionBase< ScalarType >, itk::Statistics::SigmoidTransferFunction< ScalarType >, itk::Statistics::SignedHardLimitTransferFunction< ScalarType >, itk::Statistics::SquaredDifferenceErrorFunction< TMeasurementVector, ScalarType >, itk::Statistics::SumInputFunction< TMeasurementVector, ScalarType >, itk::Statistics::SymmetricSigmoidTransferFunction< ScalarType >, itk::Statistics::TanHTransferFunction< ScalarType >, itk::Statistics::TanSigmoidTransferFunction< ScalarType >, itk::Statistics::TransferFunctionBase< ScalarType >, itk::Statistics::DensityFunction< TMeasurementVector >, itk::Statistics::DistanceMetric< TVector >, itk::Statistics::DistanceToCentroidMembershipFunction< TVector >, itk::Statistics::EuclideanDistance< TVector >, itk::Statistics::GaussianDensityFunction< TMeasurementVector >, itk::Statistics::MahalanobisDistanceMembershipFunction< TVector >, itk::Statistics::MembershipFunctionBase< TVector >, itk::CoxDeBoorBSplineKernelFunction< VSplineOrder >, itk::SpatialFunction< double, VSpaceDimension, itk::Point< TCoordRep, VSpaceDimension > >, itk::Statistics::ErrorFunctionBase< TMeasurementVector, ScalarType >, itk::Statistics::InputFunctionBase< TMeasurementVector, ScalarType >, itk::Statistics::DistanceMetric< itk::Array< double > >, itk::Statistics::EuclideanDistance< itk::Array< double > >, itk::Statistics::MembershipFunctionBase< itk::Array< double > >, and itk::Statistics::MembershipFunctionBase< TMeasurementVector >.

virtual bool itk::ImageFunction< TInputImage , bool , TCoordRep >::Evaluate ( const PointType &  point  )  const [pure virtual, inherited]

Evaluate the function at specified Point position. Subclasses must provide this method.

template<class TInputImage, class TCoordRep = float>
virtual bool itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::Evaluate ( const PointType &  point  )  const [virtual]

BinaryThreshold the image at a point position

Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer.

ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method.

virtual bool itk::ImageFunction< TInputImage , bool , TCoordRep >::EvaluateAtContinuousIndex ( const ContinuousIndexType &  index  )  const [pure virtual, inherited]

Evaluate the function at specified ContinuousIndex position. Subclasses must provide this method.

template<class TInputImage, class TCoordRep = float>
virtual bool itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtContinuousIndex ( const ContinuousIndexType &  index  )  const [virtual]

BinaryThreshold the image at a continuous index position

Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer.

ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method.

virtual bool itk::ImageFunction< TInputImage , bool , TCoordRep >::EvaluateAtIndex ( const IndexType &  index  )  const [pure virtual, inherited]

Evaluate the function at specified Index position. Subclasses must provide this method.

template<class TInputImage, class TCoordRep = float>
virtual bool itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateAtIndex ( const IndexType &  index  )  const [virtual]

BinaryThreshold the image at an index position.

Returns true if the image intensity at the specified point position satisfies the threshold criteria. The point is assumed to lie within the image buffer.

ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method.

template<class TInputImage, class TCoordRep = float>
virtual double itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateDistance ( const PointType &  point  )  const [virtual]

Returns the actual value of the MahalanobisDistance at that point. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method.

template<class TInputImage, class TCoordRep = float>
virtual double itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::EvaluateDistanceAtIndex ( const IndexType &  index  )  const [virtual]

Returns the actual value of the MahalanobisDistance at that Index. The point is assumed to lie within the image buffer. ImageFunction::IsInsideBuffer() can be used to check bounds before calling the method.

Command* itk::Object::GetCommand ( unsigned long  tag  )  [inherited]

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

template<class TInputImage, class TCoordRep = float>
const CovarianceMatrixType& itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetCovariance (  )  const

bool itk::Object::GetDebug (  )  const [inherited]

Get the value of the debug flag.

virtual const ContinuousIndexType& itk::ImageFunction< TInputImage , bool , TCoordRep >::GetEndContinuousIndex (  )  [virtual, inherited]

virtual const IndexType& itk::ImageFunction< TInputImage , bool , TCoordRep >::GetEndIndex (  )  [virtual, inherited]

static bool itk::Object::GetGlobalWarningDisplay (  )  [static, inherited]

const InputImageType* itk::ImageFunction< TInputImage , bool , TCoordRep >::GetInputImage (  )  const [inline, inherited]

Get the input image.

Definition at line 113 of file itkImageFunction.h.

template<class TInputImage, class TCoordRep = float>
const MeanVectorType& itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetMean (  )  const

const MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  const [inherited]

Returns:
A constant reference to this objects MetaDataDictionary.

MetaDataDictionary& itk::Object::GetMetaDataDictionary ( void   )  [inherited]

Returns:
A reference to this objects MetaDataDictionary.
Warning:
This reference may be changed.

virtual unsigned long itk::Object::GetMTime (  )  const [virtual, inherited]

Return this objects modified time.

Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.

Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().

template<class TInputImage, class TCoordRep = float>
virtual const char* itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetNameOfClass (  )  const [virtual]

Run-time type information (and related methods).

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

virtual int itk::LightObject::GetReferenceCount (  )  const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

virtual const ContinuousIndexType& itk::ImageFunction< TInputImage , bool , TCoordRep >::GetStartContinuousIndex (  )  [virtual, inherited]

virtual const IndexType& itk::ImageFunction< TInputImage , bool , TCoordRep >::GetStartIndex (  )  [virtual, inherited]

template<class TInputImage, class TCoordRep = float>
virtual const double& itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::GetThreshold (  )  [virtual]

Get the lower threshold value.

static void itk::Object::GlobalWarningDisplayOff (  )  [inline, static, inherited]

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

static void itk::Object::GlobalWarningDisplayOn (  )  [inline, static, inherited]

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

bool itk::Object::HasObserver ( const EventObject &  event  )  const [inherited]

Return true if an observer is registered for this event.

void itk::Object::InvokeEvent ( const EventObject &   )  const [inherited]

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

void itk::Object::InvokeEvent ( const EventObject &   )  [inherited]

Call Execute on all the Commands observing this event id.

virtual bool itk::ImageFunction< TInputImage , bool , TCoordRep >::IsInsideBuffer ( const PointType &  point  )  const [inline, virtual, inherited]

Check if a point is inside the image buffer.

Warning:
For efficiency, no validity checking of the input image pointer is done.

Definition at line 172 of file itkImageFunction.h.

virtual bool itk::ImageFunction< TInputImage , bool , TCoordRep >::IsInsideBuffer ( const ContinuousIndexType &  index  )  const [inline, virtual, inherited]

Check if a continuous index is inside the image buffer.

Warning:
For efficiency, no validity checking of the input image is done.

Definition at line 152 of file itkImageFunction.h.

virtual bool itk::ImageFunction< TInputImage , bool , TCoordRep >::IsInsideBuffer ( const IndexType &  index  )  const [inline, virtual, inherited]

Check if an index is inside the image buffer.

Warning:
For efficiency, no validity checking of the input image is done.

Definition at line 132 of file itkImageFunction.h.

itk::ImageFunction< TInputImage , bool , TCoordRep >::itkStaticConstMacro ( ImageDimension  ,
unsigned  int,
TInputImage ::ImageDimension   
) [inherited]

Dimension underlying input image.

template<class TInputImage, class TCoordRep = float>
itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::itkStaticConstMacro ( ImageDimension  ,
unsigned  int,
Superclass::ImageDimension   
)

Dimension underlying input image.

virtual void itk::Object::Modified (  )  const [virtual, inherited]

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, itk::RankImageFilter< TInputImage, TInputImage, itk::FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >.

Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().

template<class TInputImage, class TCoordRep = float>
static Pointer itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::New (  )  [static]

Method for creation through the object factory.

Reimplemented from itk::Object.

void itk::LightObject::Print ( std::ostream &  os,
Indent  indent = 0 
) const [inherited]

Cause the object to print itself out.

Referenced by itk::WeakPointer< itk::ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

bool itk::Object::PrintObservers ( std::ostream &  os,
Indent  indent 
) const [protected, inherited]

template<class TInputImage, class TCoordRep = float>
void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageFunction< TInputImage, bool, TCoordRep >.

virtual void itk::LightObject::PrintTrailer ( std::ostream &  os,
Indent  indent 
) const [protected, virtual, inherited]

virtual void itk::Object::Register (  )  const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

void itk::Object::RemoveAllObservers (  )  [inherited]

Remove all observers .

void itk::Object::RemoveObserver ( unsigned long  tag  )  [inherited]

Remove the observer with this tag value.

template<class TInputImage, class TCoordRep = float>
void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::SetCovariance ( const CovarianceMatrixType &  cov  ) 

Method to set covariance matrix Also, this function calculates inverse covariance and pre factor of MahalanobisDistance Distribution to speed up GetProbability

void itk::Object::SetDebug ( bool  debugFlag  )  const [inherited]

Set the value of the debug flag. A non-zero value turns debugging on.

static void itk::Object::SetGlobalWarningDisplay ( bool  flag  )  [static, inherited]

This is a global flag that controls whether any debug, warning or error messages are displayed.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

virtual void itk::ImageFunction< TInputImage , bool , TCoordRep >::SetInputImage ( const InputImageType *  ptr  )  [virtual, inherited]

Set the input image.

Warning:
this method caches BufferedRegion information. If the BufferedRegion has changed, user must call SetInputImage again to update cached values.

template<class TInputImage, class TCoordRep = float>
void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::SetMean ( const MeanVectorType &  mean  ) 

Method to set mean

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary &  rhs  )  [inherited]

Returns:
Set the MetaDataDictionary

virtual void itk::Object::SetReferenceCount ( int   )  [virtual, inherited]

Sets the reference count (use with care)

Reimplemented from itk::LightObject.

template<class TInputImage, class TCoordRep = float>
virtual void itk::MahalanobisDistanceThresholdImageFunction< TInputImage, TCoordRep >::SetThreshold ( double  _arg  )  [virtual]

Get the lower threshold value.

virtual void itk::Object::UnRegister (  )  const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented from itk::LightObject.

Member Data Documentation

ContinuousIndexType itk::ImageFunction< TInputImage , bool , TCoordRep >::m_EndContinuousIndex [protected, inherited]

Definition at line 234 of file itkImageFunction.h.

IndexType itk::ImageFunction< TInputImage , bool , TCoordRep >::m_EndIndex [protected, inherited]

Definition at line 232 of file itkImageFunction.h.

InputImageConstPointer itk::ImageFunction< TInputImage , bool , TCoordRep >::m_Image [protected, inherited]

Const pointer to the input image.

Definition at line 228 of file itkImageFunction.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

ContinuousIndexType itk::ImageFunction< TInputImage , bool , TCoordRep >::m_StartContinuousIndex [protected, inherited]

Definition at line 233 of file itkImageFunction.h.

IndexType itk::ImageFunction< TInputImage , bool , TCoordRep >::m_StartIndex [protected, inherited]

Cache some values for testing if indices are inside buffered region.

Definition at line 231 of file itkImageFunction.h.

The documentation for this class was generated from the following file:
Generated at Thu Nov 6 07:49:13 2008 for ITK by doxygen 1.5.1 written by Dimitri van Heesch, © 1997-2000