#include <itkLabelStatisticsImageFilter.h>
Inheritance diagram for itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >:
LabelStatisticsImageFilter computes the minimum, maximum, sum, mean, median, variance and sigma of regions of an intensity image, where the regions are defined via a label map (a second input). The label image should be integral type. The filter needs all of its input image. It behaves as a filter with an input and output. Thus it can be inserted in a pipline with other filters and the statistics will only be recomputed if a downstream filter changes.
Optionally, the filter also computes intensity histograms on each object. If histograms are enabled, a median intensity value can also be computed, although its accuracy is limited to the bin width of the histogram. If histograms are not enabled, the median returns zero.
The filter passes its intensity input through unmodified. The filter is threaded. It computes statistics in each thread then combines them in its AfterThreadedGenerate method.
Definition at line 55 of file itkLabelStatisticsImageFilter.h.
Public Types | |
| typedef std::vector< typename IndexType::IndexValueType > | BoundingBoxType |
| typedef SmartPointer< const Self > | ConstPointer |
| typedef DataObject::Pointer | DataObjectPointer |
| typedef std::vector< DataObjectPointer > | DataObjectPointerArray |
| typedef DataObjectPointerArray::size_type | DataObjectPointerArraySizeType |
| typedef HistogramType::Pointer | HistogramPointer |
| typedef itk::Statistics::Histogram< RealType, 1 > | HistogramType |
| typedef TInputImage::IndexType | IndexType |
| typedef InputImageType::ConstPointer | InputImageConstPointer |
| typedef InputImageType::PixelType | InputImagePixelType |
| typedef TInputImage::Pointer | InputImagePointer |
| typedef InputImageType::RegionType | InputImageRegionType |
| typedef TInputImage | InputImageType |
| typedef TLabelImage::Pointer | LabelImagePointer |
| typedef TLabelImage | LabelImageType |
| typedef TLabelImage::IndexType | LabelIndexType |
| typedef TLabelImage::PixelType | LabelPixelType |
| typedef TLabelImage::RegionType | LabelRegionType |
| typedef TLabelImage::SizeType | LabelSizeType |
| typedef itk::hash_map< LabelPixelType, LabelStatistics >::const_iterator | MapConstIterator |
| typedef itk::hash_map< LabelPixelType, LabelStatistics >::iterator | MapIterator |
| typedef itk::hash_map< LabelPixelType, LabelStatistics > | MapType |
| typedef OutputImageType::PixelType | OutputImagePixelType |
| typedef OutputImageType::Pointer | OutputImagePointer |
| typedef Superclass::OutputImageRegionType | OutputImageRegionType |
| typedef TInputImage | OutputImageType |
| typedef TInputImage::PixelType | PixelType |
| typedef SmartPointer< Self > | Pointer |
| typedef SimpleDataObjectDecorator< RealType > | RealObjectType |
| typedef NumericTraits< PixelType >::RealType | RealType |
| typedef TInputImage::RegionType | RegionType |
| typedef LabelStatisticsImageFilter | Self |
| typedef TInputImage::SizeType | SizeType |
| typedef ImageToImageFilter< TInputImage, TInputImage > | Superclass |
Public Member Functions | |
| virtual void | AbortGenerateDataOff () |
| virtual void | AbortGenerateDataOn () |
| virtual LightObject::Pointer | CreateAnother () const |
| virtual void | DebugOff () const |
| virtual void | DebugOn () const |
| virtual void | Delete () |
| virtual const bool & | GetAbortGenerateData () |
| BoundingBoxType | GetBoundingBox (LabelPixelType label) const |
| Command * | GetCommand (unsigned long tag) |
| unsigned long | GetCount (LabelPixelType label) const |
| bool | GetDebug () const |
| HistogramPointer | GetHistogram (LabelPixelType label) const |
| const InputImageType * | GetInput (unsigned int idx) |
| const InputImageType * | GetInput (void) |
| DataObjectPointerArray & | GetInputs () |
| LabelImageType * | GetLabelInput () |
| RealType | GetMaximum (LabelPixelType label) const |
| RealType | GetMean (LabelPixelType label) const |
| RealType | GetMedian (LabelPixelType label) const |
| const MetaDataDictionary & | GetMetaDataDictionary (void) const |
| MetaDataDictionary & | GetMetaDataDictionary (void) |
| RealType | GetMinimum (LabelPixelType label) const |
| virtual unsigned long | GetMTime () const |
| MultiThreader * | GetMultiThreader () |
| virtual const char * | GetNameOfClass () const |
| DataObjectPointerArraySizeType | GetNumberOfInputs () const |
| virtual DataObjectPointerArraySizeType | GetNumberOfValidRequiredInputs () const |
| OutputImageType * | GetOutput (unsigned int idx) |
| OutputImageType * | GetOutput (void) |
| virtual const float & | GetProgress () |
| virtual int | GetReferenceCount () const |
| RegionType | GetRegion (LabelPixelType label) const |
| RealType | GetSigma (LabelPixelType label) const |
| RealType | GetSum (LabelPixelType label) const |
| virtual bool | GetUseHistograms () |
| RealType | GetVariance (LabelPixelType label) const |
| virtual void | GraftNthOutput (unsigned int idx, DataObject *output) |
| virtual void | GraftOutput (DataObject *output) |
| bool | HasLabel (LabelPixelType label) const |
| bool | HasObserver (const EventObject &event) const |
| void | InvokeEvent (const EventObject &) const |
| void | InvokeEvent (const EventObject &) |
| itkStaticConstMacro (OutputImageDimension, unsigned int, TInputImage::ImageDimension) | |
| itkStaticConstMacro (InputImageDimension, unsigned int, TInputImage::ImageDimension) | |
| itkStaticConstMacro (ImageDimension, unsigned int, TInputImage::ImageDimension) | |
| virtual DataObjectPointer | MakeOutput (unsigned int idx) |
| virtual void | Modified () const |
| virtual void | PopBackInput () |
| virtual void | PopFrontInput () |
| virtual void | PrepareOutputs () |
| void | Print (std::ostream &os, Indent indent=0) const |
| virtual void | PropagateRequestedRegion (DataObject *output) |
| virtual void | PushBackInput (const InputImageType *image) |
| virtual void | PushFrontInput (const InputImageType *image) |
| virtual void | Register () const |
| void | RemoveAllObservers () |
| void | RemoveObserver (unsigned long tag) |
| virtual void | ResetPipeline () |
| virtual void | SetAbortGenerateData (bool _arg) |
| void | SetDebug (bool debugFlag) const |
| void | SetHistogramParameters (const int numBins, RealType lowerBound, RealType upperBound) |
| virtual void | SetInput (unsigned int, const TInputImage *image) |
| virtual void | SetInput (const InputImageType *image) |
| void | SetLabelInput (TLabelImage *input) |
| void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
| virtual void | SetProgress (float _arg) |
| virtual void | SetReferenceCount (int) |
| virtual void | SetUseHistograms (bool _arg) |
| virtual void | UnRegister () const |
| virtual void | Update () |
| virtual void | UpdateLargestPossibleRegion () |
| virtual void | UpdateOutputData (DataObject *output) |
| virtual void | UpdateOutputInformation () |
| void | UpdateProgress (float amount) |
| virtual void | UseHistogramsOff () |
| virtual void | UseHistogramsOn () |
| unsigned long | AddObserver (const EventObject &event, Command *) const |
| unsigned long | AddObserver (const EventObject &event, Command *) |
| unsigned long | GetNumberOfLabels () const |
| unsigned long | GetNumberOfObjects () const |
| DataObjectPointerArraySizeType | GetNumberOfOutputs () const |
| DataObjectPointerArray & | GetOutputs () |
| virtual const int & | GetNumberOfThreads () |
| virtual void | SetNumberOfThreads (int _arg) |
| virtual const bool & | GetReleaseDataBeforeUpdateFlag () |
| virtual void | ReleaseDataBeforeUpdateFlagOff () |
| virtual void | ReleaseDataBeforeUpdateFlagOn () |
| virtual void | SetReleaseDataBeforeUpdateFlag (bool _arg) |
| virtual bool | GetReleaseDataFlag () const |
| void | ReleaseDataFlagOff () |
| void | ReleaseDataFlagOn () |
| virtual void | SetReleaseDataFlag (bool flag) |
Static Public Member Functions | |
| static void | BreakOnError () |
| static Pointer | New () |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static void | SetGlobalWarningDisplay (bool flag) |
Protected Types | |
| typedef ImageToImageFilterDetail::ImageRegionCopier< itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension)> | InputToOutputRegionCopierType |
| typedef ImageToImageFilterDetail::ImageRegionCopier< itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension)> | OutputToInputRegionCopierType |
Protected Member Functions | |
| void | AfterThreadedGenerateData () |
| void | AllocateOutputs () |
| void | BeforeThreadedGenerateData () |
| virtual void | CacheInputReleaseDataFlags () |
| virtual void | CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion) |
| virtual void | CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion) |
| void | EnlargeOutputRequestedRegion (DataObject *data) |
| virtual void | GenerateData () |
| void | GenerateInputRequestedRegion () |
| virtual void | GenerateOutputInformation () |
| virtual void | GenerateOutputRequestedRegion (DataObject *output) |
| LabelStatisticsImageFilter () | |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| virtual void | PropagateResetPipeline () |
| void | PushBackInput (const DataObject *input) |
| void | PushFrontInput (const DataObject *input) |
| virtual void | ReleaseInputs () |
| virtual void | RestoreInputReleaseDataFlags () |
| void | SetNumberOfInputs (unsigned int num) |
| void | SetNumberOfOutputs (unsigned int num) |
| virtual int | SplitRequestedRegion (int i, int num, OutputImageRegionType &splitRegion) |
| virtual void | ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, int threadId) ITK_NO_RETURN |
| void | ThreadedGenerateData (const RegionType &outputRegionForThread, int threadId) |
| ~LabelStatisticsImageFilter () | |
| virtual void | AddInput (DataObject *input) |
| virtual const unsigned int & | GetNumberOfRequiredInputs () |
| virtual void | RemoveInput (DataObject *input) |
| virtual void | SetNthInput (unsigned int num, DataObject *input) |
| virtual void | SetNumberOfRequiredInputs (unsigned int _arg) |
| virtual void | AddOutput (DataObject *output) |
| virtual const unsigned int & | GetNumberOfRequiredOutputs () |
| virtual void | RemoveOutput (DataObject *output) |
| virtual void | SetNthOutput (unsigned int num, DataObject *output) |
| virtual void | SetNumberOfRequiredOutputs (unsigned int _arg) |
| const DataObject * | GetInput (unsigned int idx) const |
| const DataObject * | GetOutput (unsigned int idx) const |
| virtual void | PrintHeader (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
Static Protected Member Functions | |
| static ITK_THREAD_RETURN_TYPE | ThreaderCallback (void *arg) |
Protected Attributes | |
| TimeStamp | m_OutputInformationMTime |
| volatile int | m_ReferenceCount |
| SimpleFastMutexLock | m_ReferenceCountLock |
| bool | m_Updating |
Classes | |
| class | LabelStatistics |
| typedef std::vector<typename IndexType::IndexValueType> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::BoundingBoxType |
Bounding Box-related typedefs
Definition at line 100 of file itkLabelStatisticsImageFilter.h.
| typedef SmartPointer<const Self> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::ConstPointer |
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
Definition at line 63 of file itkLabelStatisticsImageFilter.h.
| typedef DataObject::Pointer itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::DataObjectPointer |
Smart Pointer type to a DataObject.
Reimplemented from itk::ImageSource< TInputImage >.
Definition at line 94 of file itkLabelStatisticsImageFilter.h.
typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray [inherited] |
STL Array of SmartPointers to DataObjects
Definition at line 103 of file itkProcessObject.h.
typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType [inherited] |
Size type of an std::vector
Definition at line 112 of file itkProcessObject.h.
| typedef HistogramType::Pointer itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::HistogramPointer |
Definition at line 104 of file itkLabelStatisticsImageFilter.h.
| typedef itk::Statistics::Histogram<RealType,1> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::HistogramType |
Histogram-related typedefs
Definition at line 103 of file itkLabelStatisticsImageFilter.h.
| typedef TInputImage::IndexType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::IndexType |
Definition at line 75 of file itkLabelStatisticsImageFilter.h.
typedef InputImageType::ConstPointer itk::ImageToImageFilter< TInputImage , TInputImage >::InputImageConstPointer [inherited] |
Reimplemented in itk::InPlaceImageFilter< TInputImage >.
Definition at line 83 of file itkImageToImageFilter.h.
typedef InputImageType::PixelType itk::ImageToImageFilter< TInputImage , TInputImage >::InputImagePixelType [inherited] |
Reimplemented in itk::ChangeInformationImageFilter< TInputImage >, itk::ShiftScaleInPlaceImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
Definition at line 85 of file itkImageToImageFilter.h.
| typedef TInputImage::Pointer itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::InputImagePointer |
Image related typedefs.
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
Definition at line 69 of file itkLabelStatisticsImageFilter.h.
typedef InputImageType::RegionType itk::ImageToImageFilter< TInputImage , TInputImage >::InputImageRegionType [inherited] |
Reimplemented in itk::ChangeInformationImageFilter< TInputImage >, itk::ShiftScaleInPlaceImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
Definition at line 84 of file itkImageToImageFilter.h.
typedef TInputImage itk::ImageToImageFilter< TInputImage , TInputImage >::InputImageType [inherited] |
Some convenient typedefs.
Reimplemented in itk::MinimumMaximumImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
Definition at line 81 of file itkImageToImageFilter.h.
typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension)> itk::ImageToImageFilter< TInputImage , TInputImage >::InputToOutputRegionCopierType [protected, inherited] |
Typedef for the region copier function object that converts an input region to an output region.
Definition at line 163 of file itkImageToImageFilter.h.
| typedef TLabelImage::Pointer itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelImagePointer |
Definition at line 80 of file itkLabelStatisticsImageFilter.h.
| typedef TLabelImage itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelImageType |
Label image related typedefs.
Definition at line 79 of file itkLabelStatisticsImageFilter.h.
| typedef TLabelImage::IndexType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelIndexType |
Definition at line 83 of file itkLabelStatisticsImageFilter.h.
| typedef TLabelImage::PixelType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelPixelType |
Definition at line 84 of file itkLabelStatisticsImageFilter.h.
| typedef TLabelImage::RegionType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelRegionType |
Definition at line 81 of file itkLabelStatisticsImageFilter.h.
| typedef TLabelImage::SizeType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelSizeType |
Definition at line 82 of file itkLabelStatisticsImageFilter.h.
| typedef itk::hash_map<LabelPixelType, LabelStatistics>::const_iterator itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::MapConstIterator |
Definition at line 221 of file itkLabelStatisticsImageFilter.h.
| typedef itk::hash_map<LabelPixelType, LabelStatistics>::iterator itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::MapIterator |
Definition at line 220 of file itkLabelStatisticsImageFilter.h.
| typedef itk::hash_map<LabelPixelType, LabelStatistics> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::MapType |
Type of the map used to store data per label
Definition at line 219 of file itkLabelStatisticsImageFilter.h.
typedef OutputImageType::PixelType itk::ImageSource< TInputImage >::OutputImagePixelType [inherited] |
Reimplemented in itk::ChangeInformationImageFilter< TInputImage >, itk::ShiftScaleInPlaceImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
Definition at line 71 of file itkImageSource.h.
typedef OutputImageType::Pointer itk::ImageSource< TInputImage >::OutputImagePointer [inherited] |
Reimplemented in itk::ShiftScaleInPlaceImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
Definition at line 69 of file itkImageSource.h.
typedef Superclass::OutputImageRegionType itk::ImageToImageFilter< TInputImage , TInputImage >::OutputImageRegionType [inherited] |
Superclass typedefs.
Reimplemented from itk::ImageSource< TInputImage >.
Reimplemented in itk::ChangeInformationImageFilter< TInputImage >, itk::ShiftScaleInPlaceImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
Definition at line 75 of file itkImageToImageFilter.h.
typedef TInputImage itk::ImageSource< TInputImage >::OutputImageType [inherited] |
Some convenient typedefs.
Reimplemented in itk::InPlaceImageFilter< TInputImage >.
Definition at line 65 of file itkImageSource.h.
typedef ImageToImageFilterDetail::ImageRegionCopier<itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension)> itk::ImageToImageFilter< TInputImage , TInputImage >::OutputToInputRegionCopierType [protected, inherited] |
Typedef for the region copier function object that converts an output region to an input region.
Definition at line 168 of file itkImageToImageFilter.h.
| typedef TInputImage::PixelType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::PixelType |
Definition at line 76 of file itkLabelStatisticsImageFilter.h.
| typedef SmartPointer<Self> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::Pointer |
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
Definition at line 62 of file itkLabelStatisticsImageFilter.h.
| typedef SimpleDataObjectDecorator<RealType> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::RealObjectType |
Type of DataObjects used for scalar outputs
Definition at line 97 of file itkLabelStatisticsImageFilter.h.
| typedef NumericTraits<PixelType>::RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::RealType |
Type to use for computations.
Definition at line 91 of file itkLabelStatisticsImageFilter.h.
| typedef TInputImage::RegionType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::RegionType |
Definition at line 73 of file itkLabelStatisticsImageFilter.h.
| typedef LabelStatisticsImageFilter itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::Self |
Standard Self typedef
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
Definition at line 60 of file itkLabelStatisticsImageFilter.h.
| typedef TInputImage::SizeType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::SizeType |
Definition at line 74 of file itkLabelStatisticsImageFilter.h.
| typedef ImageToImageFilter<TInputImage,TInputImage> itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::Superclass |
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
Definition at line 61 of file itkLabelStatisticsImageFilter.h.
| itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::LabelStatisticsImageFilter | ( | ) | [protected] |
| itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::~LabelStatisticsImageFilter | ( | ) | [inline, protected] |
Definition at line 307 of file itkLabelStatisticsImageFilter.h.
| virtual void itk::ProcessObject::AbortGenerateDataOff | ( | ) | [virtual, inherited] |
| virtual void itk::ProcessObject::AbortGenerateDataOn | ( | ) | [virtual, inherited] |
Turn on and off the AbortGenerateData flag.
| virtual void itk::ProcessObject::AddInput | ( | DataObject * | input | ) | [protected, virtual, inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | const [inherited] |
| unsigned long itk::Object::AddObserver | ( | const EventObject & | event, | |
| Command * | ||||
| ) | [inherited] |
Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
| virtual void itk::ProcessObject::AddOutput | ( | DataObject * | output | ) | [protected, virtual, inherited] |
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::AfterThreadedGenerateData | ( | ) | [protected, virtual] |
Do final mean and variance computation from data accumulated in threads.
Reimplemented from itk::ImageSource< TInputImage >.
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::AllocateOutputs | ( | ) | [protected, virtual] |
Pass the input through unmodified. Do this by Grafting in the AllocateOutputs method.
Reimplemented from itk::ImageSource< TInputImage >.
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::BeforeThreadedGenerateData | ( | ) | [protected, virtual] |
Initialize some accumulators before the threads run.
Reimplemented from itk::ImageSource< TInputImage >.
| static void itk::LightObject::BreakOnError | ( | ) | [static, inherited] |
This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
| virtual void itk::ProcessObject::CacheInputReleaseDataFlags | ( | ) | [protected, virtual, inherited] |
Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::CallCopyInputRegionToOutputRegion | ( | OutputImageRegionType & | destRegion, | |
| const InputImageRegionType & | srcRegion | |||
| ) | [protected, virtual, inherited] |
This function calls the actual region copier to do the mapping from input image space to output image space. It uses a Function object used for dispatching to various routines to copy an input region (start index and size) to an output region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::UnaryFunctorImageFilter can support output images of a higher dimension that the input.
This function object is used by the default implementation of GenerateOutputInformation(). It can also be used in routines like ThreadedGenerateData() where a filter may need to map an input region to an output region.
The default copier uses a "dispatch pattern" to call one of three overloaded functions depending on whether the input and output images are the same dimension, the input is a higher dimension that the output, or the input is of a lower dimension than the output. The use of an overloaded function is required for proper compilation of the various cases.
For the latter two cases, trivial implementations are used. If the input image is a higher dimension than the output, the first portion of the input region is copied to the output region. If the input region is a lower dimension than the output, the input region information is copied into the first portion of the output region and the rest of the output region is set to zero.
If a filter needs a different default behavior, it can override this method.
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::CallCopyOutputRegionToInputRegion | ( | InputImageRegionType & | destRegion, | |
| const OutputImageRegionType & | srcRegion | |||
| ) | [protected, virtual, inherited] |
This function calls the actual region copier to do the mapping from output image space to input image space. It uses a Function object used for dispatching to various routines to copy an output region (start index and size) to an input region. For most filters, this is a trivial copy because most filters require the input dimension to match the output dimension. However, some filters like itk::ExtractImageFilter can support output images of a lower dimension that the input.
This function object can be used by GenerateOutputInformation() to copy the input LargestPossibleRegion to the output LargestPossibleRegion and can also be used in GenerateData or ThreadedGenerateData() where a filter may need to map an output region to an input region.
The default copier uses a "dispatch pattern" to call one of three overloaded functions depending on whether the input and output images are the same dimension, the input is a higher dimension that the output, or the input is of a lower dimension than the output. The use of an overloaded function is required for proper compilation of the various cases.
For the latter two cases, trivial implementations are used. If the input image is a higher dimension than the output, the output region information is copied into the first portion of the input region and the rest of the input region is set to zero. If the input region is a lower dimension than the output, the first portion of the output region is copied to the input region.
If a filter needs a different default behavior, it can override this method. The ExtractImageFilter overrides this function object so that if the input image is a higher dimension than the output image, the filter can control "where" in the input image the output subimage is extracted (as opposed to mapping to first few dimensions of the input).
| virtual LightObject::Pointer itk::Object::CreateAnother | ( | ) | const [virtual, inherited] |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
| virtual void itk::Object::DebugOff | ( | ) | const [virtual, inherited] |
Turn debugging output off.
| virtual void itk::Object::DebugOn | ( | ) | const [virtual, inherited] |
Turn debugging output on.
| virtual void itk::LightObject::Delete | ( | ) | [virtual, inherited] |
Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::EnlargeOutputRequestedRegion | ( | DataObject * | data | ) | [protected, virtual] |
Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.
Reimplemented from itk::ProcessObject.
| virtual void itk::ImageSource< TInputImage >::GenerateData | ( | void | ) | [protected, virtual, inherited] |
A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.
Reimplemented from itk::ProcessObject.
Reimplemented in itk::ChangeInformationImageFilter< TInputImage >.
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GenerateInputRequestedRegion | ( | ) | [protected, virtual] |
What is the input requested region that is required to produce the output requested region? The base assumption for image processing filters is that the input requested region can be set to match the output requested region. If a filter requires more input (for instance a filter that uses neighborhoods needs more input than output to avoid introducing artificial boundary conditions) or less input (for instance a magnify filter) will have to override this method. In doing so, it should call its superclass' implementation as its first step. Note that imaging filters operate differently than the classes to this point in the class hierachy. Up till now, the base assumption has been that the largest possible region will be requested of the input.
This implementation of GenerateInputRequestedRegion() only processes the inputs that are a subclass of the ImageBase<InputImageDimension>. If an input is another type of DataObject (including an Image of a different dimension), they are skipped by this method. The subclasses of ImageToImageFilter are responsible for providing an implementation of GenerateInputRequestedRegion() when there are multiple inputs of different types.
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
| virtual void itk::ProcessObject::GenerateOutputInformation | ( | ) | [protected, virtual, inherited] |
Generate the information decribing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.
Reimplemented in itk::BayesianClassifierInitializationImageFilter< TInputImage, TProbabilityPrecisionType >, itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >, itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >, itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >, itk::FFTComplexConjugateToRealImageFilter< TPixel, Dimension >, itk::FFTRealToComplexConjugateImageFilter< TPixel, Dimension >, itk::MRFImageFilter< TInputImage, TClassifiedImage >, itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField >, itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >, itk::VoronoiDiagram2DGenerator< TCoordType >, itk::AccumulateImageFilter< TInputImage, TOutputImage >, itk::BinaryMaskToNarrowBandPointSetFilter< TInputImage, TOutputMesh >, itk::ChangeInformationImageFilter< TInputImage >, itk::CropImageFilter< TInputImage, TOutputImage >, itk::DeformationFieldSource< TOutputImage >, itk::ExpandImageFilter< TInputImage, TOutputImage >, itk::ExtractImageFilter< TInputImage, TOutputImage >, itk::ExtractOrthogonalSwath2DImageFilter< TImage >, itk::FlipImageFilter< TImage >, itk::GaussianImageSource< TOutputImage >, itk::GradientImageToBloxBoundaryPointImageFilter< TInputImage >, itk::HoughTransform2DLinesImageFilter< TInputPixelType, TOutputPixelType >, itk::ImageToMeshFilter< TInputImage, TOutputMesh >, itk::ImageToParametricSpaceFilter< TInputImage, TOutputMesh >, itk::ImportImageFilter< TPixel, VImageDimension >, itk::InterpolateImagePointsFilter< TInputImage, TOutputImage, TCoordType, InterpolatorType >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::JoinSeriesImageFilter< TInputImage, TOutputImage >, itk::NonThreadedShrinkImageFilter< TInputImage, TOutputImage >, itk::OrientImageFilter< TInputImage, TOutputImage >, itk::PadImageFilter< TInputImage, TOutputImage >, itk::ParametricSpaceToImageSpaceMeshFilter< TInputMesh, TOutputMesh >, itk::PathToImageFilter< TInputPath, TOutputImage >, itk::PermuteAxesImageFilter< TImage >, itk::PointSetToImageFilter< TInputPointSet, TOutputImage >, itk::RandomImageSource< TOutputImage >, itk::RegionOfInterestImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::ShrinkImageFilter< TInputImage, TOutputImage >, itk::SpatialObjectToImageFilter< TInputSpatialObject, TOutputImage >, itk::SpatialObjectToPointSetFilter< TInputSpatialObject, TOutputPointSet >, itk::TileImageFilter< TInputImage, TOutputImage >, itk::TriangleMeshToBinaryImageFilter< TInputMesh, TOutputImage >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, TFunction >, itk::VectorExpandImageFilter< TInputImage, TOutputImage >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VTKImageImport< TOutputImage >, itk::WarpImageFilter< TInputImage, TOutputImage, TDeformationField >, itk::WarpVectorImageFilter< TInputImage, TOutputImage, TDeformationField >, itk::ImageFileReader< TOutputImage, ConvertPixelTraits >, itk::ImageSeriesReader< TOutputImage >, itk::HistogramToImageFilter< THistogram, TFunction >, itk::Statistics::ImageToListGenerator< TImage, TMaskImage >, itk::ProjectionImageFilter< TInputImage, TOutputImage, TAccumulator >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Sqrt< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::SymmetricEigenAnalysisFunction< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Square< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Sigmoid< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Sin< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::BinaryThreshold< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::Cos< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::IntensityLinearTransform< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::ThresholdLabeler< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::MatrixIndexSelection< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::ModulusTransform< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::GradientMagnitude< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::ChangeLabel< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::BoundedReciprocal< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::ExpNegative< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::RGBToLuminance< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::Acos< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Log10< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::ComplexToImaginary< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::IntensityWindowingTransform< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::VectorCast< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::ComplexToPhase< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::EdgePotential< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::AccessorFunctor< TInputImage::PixelType, TAccessor > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::Atan< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::VectorIndexSelectionCast< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::ComplexToReal< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Tan< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Abs< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Log< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::Asin< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::TensorFractionalAnisotropyFunction< TInputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::ComplexToModulus< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TFeatureImageType, Superclass::ImageType, itk::Functor::Cast< TFeatureImageType::PixelType, Superclass::ImageType::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Function::Exp< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::NOT< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TLabelImage, TOutputImage, itk::Functor::LabelToRGBFunctor< TLabelImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::VectorMagnitudeLinearTransform< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::TensorRelativeAnisotropyFunction< TInputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::Cast< TInputImage::PixelType, TOutputImage::PixelType > >, itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, itk::Functor::InvertIntensityTransform< TInputImage::PixelType, TOutputImage::PixelType > >, itk::HistogramToImageFilter< THistogram, itk::Function::HistogramLogProbabilityFunction< unsigned long > >, itk::HistogramToImageFilter< THistogram, itk::Function::HistogramIntensityFunction< unsigned long > >, itk::HistogramToImageFilter< THistogram, itk::Function::HistogramProbabilityFunction< unsigned long > >, itk::HistogramToImageFilter< THistogram, itk::Function::HistogramEntropyFunction< unsigned long > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::MedianAccumulator< TInputImage::PixelType > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::MaximumAccumulator< TInputImage::PixelType > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::BinaryThresholdAccumulator< TInputImage::PixelType, TOutputImage::PixelType > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::MinimumAccumulator< TInputImage::PixelType > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::MeanAccumulator< TInputImage::PixelType, TAccumulate > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::StandardDeviationAccumulator< TInputImage::PixelType, TAccumulate > >, itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::SumAccumulator< TInputImage::PixelType, TOutputImage::PixelType > >, and itk::ProjectionImageFilter< TInputImage, TOutputImage, itk::Function::BinaryAccumulator< TInputImage::PixelType, TOutputImage::PixelType > >.
| virtual void itk::ProcessObject::GenerateOutputRequestedRegion | ( | DataObject * | output | ) | [protected, virtual, inherited] |
Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.
Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.
Reimplemented in itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Segmenter< TInputImage >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>, and itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >.
| virtual const bool& itk::ProcessObject::GetAbortGenerateData | ( | ) | [virtual, inherited] |
Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.
| BoundingBoxType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetBoundingBox | ( | LabelPixelType | label | ) | const |
Return the computed bounding box for a label.
| Command* itk::Object::GetCommand | ( | unsigned long | tag | ) | [inherited] |
Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
| unsigned long itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetCount | ( | LabelPixelType | label | ) | const |
Return the number of pixels for a label.
| bool itk::Object::GetDebug | ( | ) | const [inherited] |
Get the value of the debug flag.
| static bool itk::Object::GetGlobalWarningDisplay | ( | ) | [static, inherited] |
| HistogramPointer itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetHistogram | ( | LabelPixelType | label | ) | const |
Return the histogram for a label
| const DataObject* itk::ProcessObject::GetInput | ( | unsigned int | idx | ) | const [protected, inherited] |
| const InputImageType* itk::ImageToImageFilter< TInputImage , TInputImage >::GetInput | ( | unsigned int | idx | ) | [inherited] |
Method used internally for getting an input.
Reimplemented from itk::ProcessObject.
| const InputImageType* itk::ImageToImageFilter< TInputImage , TInputImage >::GetInput | ( | void | ) | [inherited] |
| DataObjectPointerArray& itk::ProcessObject::GetInputs | ( | ) | [inline, inherited] |
Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.
Definition at line 108 of file itkProcessObject.h.
| LabelImageType* itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetLabelInput | ( | ) | [inline] |
Get the label image
Definition at line 236 of file itkLabelStatisticsImageFilter.h.
References itk::ProcessObject::GetInput().
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetMaximum | ( | LabelPixelType | label | ) | const |
Return the computed Maximum for a label.
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetMean | ( | LabelPixelType | label | ) | const |
Return the computed Mean for a label.
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetMedian | ( | LabelPixelType | label | ) | const |
Return the computed Median for a label. Requires histograms to be enabled!
| const MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | const [inherited] |
| MetaDataDictionary& itk::Object::GetMetaDataDictionary | ( | void | ) | [inherited] |
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetMinimum | ( | LabelPixelType | label | ) | const |
Return the computed Minimum for a label.
| virtual unsigned long itk::Object::GetMTime | ( | ) | const [virtual, inherited] |
Return this objects modified time.
Reimplemented in itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::MeshSpatialObject< TMesh >, itk::SceneSpatialObject< TSpaceDimension >, itk::SpatialObject< TDimension >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::SpatialObject< 3 >, and itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >.
Referenced by itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime().
| MultiThreader* itk::ProcessObject::GetMultiThreader | ( | ) | [inline, inherited] |
Return the multithreader used by this class.
Definition at line 284 of file itkProcessObject.h.
| virtual const char* itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetNameOfClass | ( | ) | const [virtual] |
Runtime information support.
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
| DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfInputs | ( | ) | const [inline, inherited] |
Get the size of the input vector. This is merely the size of the input vector, not the number of inputs that have valid DataObject's assigned. Use GetNumberOfValidRequiredInputs() to determine how many inputs are non-null.
Definition at line 118 of file itkProcessObject.h.
| unsigned long itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetNumberOfLabels | ( | ) | const [inline] |
Definition at line 253 of file itkLabelStatisticsImageFilter.h.
| unsigned long itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetNumberOfObjects | ( | ) | const [inline] |
Get the number of labels used
Definition at line 249 of file itkLabelStatisticsImageFilter.h.
| DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfOutputs | ( | ) | const [inline, inherited] |
Definition at line 135 of file itkProcessObject.h.
| virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredInputs | ( | ) | [protected, virtual, inherited] |
| virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredOutputs | ( | ) | [protected, virtual, inherited] |
| virtual const int& itk::ProcessObject::GetNumberOfThreads | ( | ) | [virtual, inherited] |
| virtual DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfValidRequiredInputs | ( | ) | const [virtual, inherited] |
Get the number of valid inputs. This is the number of non-null entries in the input vector in the first NumberOfRequiredInputs slots. This method is used to determine whether the necessary required inputs have been set. Subclasses of ProcessObject may override this implementation if the required inputs are not the first slots in input vector.
Reimplemented in itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField >, and itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.
| const DataObject* itk::ProcessObject::GetOutput | ( | unsigned int | idx | ) | const [protected, inherited] |
| OutputImageType* itk::ImageSource< TInputImage >::GetOutput | ( | unsigned int | idx | ) | [inherited] |
Method used internally for getting an output.
Reimplemented from itk::ProcessObject.
| OutputImageType* itk::ImageSource< TInputImage >::GetOutput | ( | void | ) | [inherited] |
Get the output data of this process object. The output of this function is not valid until an appropriate Update() method has been called, either explicitly or implicitly. Both the filter itself and the data object have Update() methods, and both methods update the data. Here are three ways to use GetOutput() and make sure the data is valid. In these examples, image is a pointer to some Image object, and the particular ProcessObjects involved are filters. The same examples apply to non-image (e.g. Mesh) data as well.
anotherFilter->SetInput( someFilter->GetOutput() ); anotherFilter->Update();
In this situation, someFilter and anotherFilter are said to constitute a pipeline.
image = someFilter->GetOutput(); image->Update();
someFilter->Update(); image = someFilter->GetOutput();
Note that Update() is not called automatically except within a pipeline as in the first example. When streaming (using a StreamingImageFilter) is activated, it may be more efficient to use a pipeline than to call Update() once for each filter in turn.
For an image, the data generated is for the requested Region, which can be set using ImageBase::SetRequestedRegion(). By default, the largest possible region is requested.
| DataObjectPointerArray& itk::ProcessObject::GetOutputs | ( | ) | [inline, inherited] |
Return an array with all the outputs of this process object. This is useful for tracing forward in the pipeline to contruct graphs etc.
Definition at line 133 of file itkProcessObject.h.
| virtual const float& itk::ProcessObject::GetProgress | ( | ) | [virtual, inherited] |
Get the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution.
| virtual int itk::LightObject::GetReferenceCount | ( | ) | const [inline, virtual, inherited] |
Gets the reference count on this object.
Definition at line 98 of file itkLightObject.h.
| RegionType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetRegion | ( | LabelPixelType | label | ) | const |
Return the computed region.
| virtual const bool& itk::ProcessObject::GetReleaseDataBeforeUpdateFlag | ( | ) | [virtual, inherited] |
| virtual bool itk::ProcessObject::GetReleaseDataFlag | ( | ) | const [virtual, inherited] |
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetSigma | ( | LabelPixelType | label | ) | const |
Return the computed Standard Deviation for a label.
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetSum | ( | LabelPixelType | label | ) | const |
Return the compute Sum for a label.
| virtual bool itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetUseHistograms | ( | ) | [virtual] |
| RealType itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::GetVariance | ( | LabelPixelType | label | ) | const |
Return the computed Variance for a label.
| static void itk::Object::GlobalWarningDisplayOff | ( | ) | [inline, static, inherited] |
| static void itk::Object::GlobalWarningDisplayOn | ( | ) | [inline, static, inherited] |
| virtual void itk::ImageSource< TInputImage >::GraftNthOutput | ( | unsigned int | idx, | |
| DataObject * | output | |||
| ) | [virtual, inherited] |
Graft the specified data object onto this ProcessObject's idx'th output. This is similar to the GraftOutput method except it allows you to specify which output is affected. The specified index must be a valid output number (less than ProcessObject::GetNumberOfOutputs()). See the GraftOutput for general usage information.
| virtual void itk::ImageSource< TInputImage >::GraftOutput | ( | DataObject * | output | ) | [virtual, inherited] |
Graft the specified DataObject onto this ProcessObject's output. This method grabs a handle to the specified DataObject's bulk data to used as its output's own bulk data. It also copies the region ivars (RequestedRegion, BufferedRegion, LargestPossibleRegion) and meta-data (Spacing, Origin) from the specified data object into this filter's output data object. Most importantly, however, it leaves the Source ivar untouched so the original pipeline routing is intact. This method is used when a process object is implemented using a mini-pipeline which is defined in its GenerateData() method. The usage is:
// setup the mini-pipeline to process the input to this filter firstFilterInMiniPipeline->SetInput( this->GetInput() ); // setup the mini-pipeline to calculate the correct regions // and write to the appropriate bulk data block lastFilterInMiniPipeline->GraftOutput( this->GetOutput() ); // execute the mini-pipeline lastFilterInMiniPipeline->Update(); // graft the mini-pipeline output back onto this filter's output. // this is needed to get the appropriate regions passed back. this->GraftOutput( lastFilterInMiniPipeline->GetOutput() );
For proper pipeline execution, a filter using a mini-pipeline must implement the GenerateInputRequestedRegion(), GenerateOutputRequestedRegion(), GenerateOutputInformation() and EnlargeOutputRequestedRegion() methods as necessary to reflect how the mini-pipeline will execute (in other words, the outer filter's pipeline mechanism must be consistent with what the mini-pipeline will do).
| bool itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::HasLabel | ( | LabelPixelType | label | ) | const [inline] |
Does the specified label exist? Can only be called after a call a call to Update().
Definition at line 243 of file itkLabelStatisticsImageFilter.h.
| bool itk::Object::HasObserver | ( | const EventObject & | event | ) | const [inherited] |
Return true if an observer is registered for this event.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | const [inherited] |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
| void itk::Object::InvokeEvent | ( | const EventObject & | ) | [inherited] |
Call Execute on all the Commands observing this event id.
| itk::ImageToImageFilter< TInputImage , TInputImage >::itkStaticConstMacro | ( | OutputImageDimension | , | |
| unsigned | int, | |||
| TInputImage ::ImageDimension | ||||
| ) | [inherited] |
Reimplemented in itk::MinimumMaximumImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
| itk::ImageToImageFilter< TInputImage , TInputImage >::itkStaticConstMacro | ( | InputImageDimension | , | |
| unsigned | int, | |||
| TInputImage ::ImageDimension | ||||
| ) | [inherited] |
ImageDimension constants
Reimplemented in itk::MinimumMaximumImageFilter< TInputImage >, and itk::InPlaceImageFilter< TInputImage >.
| itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::itkStaticConstMacro | ( | ImageDimension | , | |
| unsigned | int, | |||
| TInputImage::ImageDimension | ||||
| ) |
Image related typedefs.
| virtual DataObjectPointer itk::ImageSource< TInputImage >::MakeOutput | ( | unsigned int | idx | ) | [virtual, inherited] |
Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a SmartPointer to a DataObject. If a subclass of ImageSource has multiple outputs of different types, then that class must provide an implementation of MakeOutput().
Reimplemented from itk::ProcessObject.
Reimplemented in itk::MinimumMaximumImageFilter< TInputImage >, and itk::StatisticsImageFilter< TInputImage >.
| virtual void itk::Object::Modified | ( | ) | const [virtual, inherited] |
Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Reimplemented in itk::NormalizeImageFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, itk::Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< itk::VectorImage< TPixelType, Dimension >, itk::Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, itk::PixelAccessor< TInternalType, TExternalType > >, itk::ImageAdaptor< TImage, itk::Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, itk::Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, itk::Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, itk::Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >.
Referenced by itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), itk::HistogramAlgorithmBase< TInputHistogram >::SetInputHistogram(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::NonUniformBSpline< TDimension >::SetSplineOrder(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), and itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation().
| static Pointer itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::New | ( | ) | [static] |
Method for creation through the object factory.
Reimplemented from itk::Object.
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::PopBackInput | ( | ) | [virtual, inherited] |
Reimplemented from itk::ProcessObject.
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::PopFrontInput | ( | ) | [virtual, inherited] |
Reimplemented from itk::ProcessObject.
| virtual void itk::ProcessObject::PrepareOutputs | ( | ) | [virtual, inherited] |
An opportunity to deallocate a ProcessObject's bulk data storage. Some filters may wish to reuse existing bulk data storage to avoid unnecessary deallocation/allocation sequences. The default implementation calls Initialize() on each output. DataObject::Initialize() frees its bulk data by default.
Reimplemented in itk::WatershedImageFilter< TInputImage >.
| void itk::LightObject::Print | ( | std::ostream & | os, | |
| Indent | indent = 0 | |||
| ) | const [inherited] |
Cause the object to print itself out.
Referenced by itk::WeakPointer< itk::ProcessObject >::Print().
| virtual void itk::LightObject::PrintHeader | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| bool itk::Object::PrintObservers | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, inherited] |
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::PrintSelf | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual] |
Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.
| virtual void itk::LightObject::PrintTrailer | ( | std::ostream & | os, | |
| Indent | indent | |||
| ) | const [protected, virtual, inherited] |
| virtual void itk::ProcessObject::PropagateRequestedRegion | ( | DataObject * | output | ) | [virtual, inherited] |
Send the requested region information back up the pipeline (to the filters that preceed this one).
Reimplemented in itk::VTKImageImport< TOutputImage >.
| virtual void itk::ProcessObject::PropagateResetPipeline | ( | ) | [protected, virtual, inherited] |
Propagate a call to ResetPipeline() up the pipeline. Called only from DataObject.
| void itk::ImageToImageFilter< TInputImage , TInputImage >::PushBackInput | ( | const DataObject * | input | ) | [inline, protected, virtual, inherited] |
PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.
Reimplemented from itk::ProcessObject.
Definition at line 250 of file itkImageToImageFilter.h.
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::PushBackInput | ( | const InputImageType * | image | ) | [virtual, inherited] |
Push/Pop the input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.
The routines are useful for applications that need to process "rolling" sets of images. For instance, if an application has 10 images and they need to run a filter on images 1, 2, 3, 4, then run the filter on images 2, 3, 4, 5, then run the filter on images 3, 4, 5, 6, the application can accomplish this by popping an input off the front of the input list and push a new image onto the back of input list. Again, this only makes sense for filters that single type of input.
Other uses are also possible. For a single input filter, pushing and popping inputs allow the application to temporarily replace an input to a filter.
| void itk::ImageToImageFilter< TInputImage , TInputImage >::PushFrontInput | ( | const DataObject * | input | ) | [inline, protected, virtual, inherited] |
PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.
Reimplemented from itk::ProcessObject.
Definition at line 252 of file itkImageToImageFilter.h.
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::PushFrontInput | ( | const InputImageType * | image | ) | [virtual, inherited] |
| virtual void itk::Object::Register | ( | ) | const [virtual, inherited] |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
| virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOff | ( | ) | [virtual, inherited] |
| virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOn | ( | ) | [virtual, inherited] |
| void itk::ProcessObject::ReleaseDataFlagOff | ( | ) | [inline, inherited] |
Definition at line 257 of file itkProcessObject.h.
| void itk::ProcessObject::ReleaseDataFlagOn | ( | ) | [inline, inherited] |
Definition at line 256 of file itkProcessObject.h.
| virtual void itk::ProcessObject::ReleaseInputs | ( | ) | [protected, virtual, inherited] |
A filter may need to release its input's bulk data after it has finished calculating a new output. The filter may need to release the inputs because the user has turned on the ReleaseDataFlag or it may need to release the inputs because the filter is an "in place" filter and it has overwritten its input with its output data. The implementation here simply checks the ReleaseDataFlag of the inputs. InPlaceImageFilter overrides this method so release the input it has overwritten.
Reimplemented in itk::InPlaceImageFilter< TInputImage, TOutputImage >, itk::InPlaceImageFilter< TDeformationField, TDeformationField >, itk::InPlaceImageFilter< TLabelImage, TOutputImage >, itk::InPlaceImageFilter< TInputImage >, itk::InPlaceImageFilter< TInputImage, TSparseOutputImage >, itk::InPlaceImageFilter< TFeatureImageType, Superclass::ImageType >, itk::InPlaceImageFilter< TInputImage1, TOutputImage >, itk::InPlaceImageFilter< TInputImage, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >, itk::InPlaceImageFilter< TInputImage1, itk::Functor::MakeJoin< TInputImage1, TInputImage2 >::ImageType >, itk::InPlaceImageFilter< TInputImageType, TSparseOutputImageType >, and itk::InPlaceImageFilter< TImage, TImage >.
| void itk::Object::RemoveAllObservers | ( | ) | [inherited] |
Remove all observers .
| virtual void itk::ProcessObject::RemoveInput | ( | DataObject * | input | ) | [protected, virtual, inherited] |
| void itk::Object::RemoveObserver | ( | unsigned long | tag | ) | [inherited] |
Remove the observer with this tag value.
| virtual void itk::ProcessObject::RemoveOutput | ( | DataObject * | output | ) | [protected, virtual, inherited] |
| virtual void itk::ProcessObject::ResetPipeline | ( | ) | [virtual, inherited] |
| virtual void itk::ProcessObject::RestoreInputReleaseDataFlags | ( | ) | [protected, virtual, inherited] |
Restore the cached input ReleaseDataFlags.
| virtual void itk::ProcessObject::SetAbortGenerateData | ( | bool | _arg | ) | [virtual, inherited] |
Set the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.
| void itk::Object::SetDebug | ( | bool | debugFlag | ) | const [inherited] |
Set the value of the debug flag. A non-zero value turns debugging on.
| static void itk::Object::SetGlobalWarningDisplay | ( | bool | flag | ) | [static, inherited] |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::SetHistogramParameters | ( | const int | numBins, | |
| RealType | lowerBound, | |||
| RealType | upperBound | |||
| ) |
specify Histogram parameters
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::SetInput | ( | unsigned | int, | |
| const TInputImage * | image | |||
| ) | [virtual, inherited] |
| virtual void itk::ImageToImageFilter< TInputImage , TInputImage >::SetInput | ( | const InputImageType * | image | ) | [virtual, inherited] |
Set/Get the image input of this process object.
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::SetLabelInput | ( | TLabelImage * | input | ) | [inline] |
Set the label image
Definition at line 229 of file itkLabelStatisticsImageFilter.h.
| void itk::Object::SetMetaDataDictionary | ( | const MetaDataDictionary & | rhs | ) | [inherited] |
| virtual void itk::ProcessObject::SetNthInput | ( | unsigned int | num, | |
| DataObject * | input | |||
| ) | [protected, virtual, inherited] |
Protected methods for setting inputs. Subclasses make use of them for setting input.
Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryA(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetBoundaryB(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetEquivalencyTable(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetFeatureImage(), itk::NarrowBandLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType, itk::Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetFeatureImage(), itk::WatershedImageFilter< TInputImage >::SetInput(), itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >::SetInputEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::SetInputImage(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::SetInputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetInputImage(), itk::watershed::SegmentTreeGenerator< InputImageType::PixelType >::SetInputSegmentTable(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::SetInputSegmentTree(), itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType >::SetReferenceImage(), and itk::ChangeInformationImageFilter< TInputImage >::SetReferenceImage().
| virtual void itk::ProcessObject::SetNthOutput | ( | unsigned int | num, | |
| DataObject * | output | |||
| ) | [protected, virtual, inherited] |
Protected methods for setting outputs. Subclasses make use of them for getting output.
Referenced by itk::watershed::BoundaryResolver< TPixelType, TDimension >::BoundaryResolver(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::EquivalenceRelabeler(), itk::watershed::Segmenter< TInputImage >::SetBoundary(), itk::watershed::BoundaryResolver< TPixelType, TDimension >::SetEquivalencyTable(), itk::watershed::Segmenter< TInputImage >::SetOutputImage(), itk::watershed::Relabeler< InputImageType::PixelType, itkGetStaticConstMacro(ImageDimension)>::SetOutputImage(), itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >::SetOutputImage(), and itk::watershed::Segmenter< TInputImage >::SetSegmentTable().
| void itk::ProcessObject::SetNumberOfInputs | ( | unsigned int | num | ) | [protected, inherited] |
Called to allocate the input array. Copies old inputs.
| void itk::ProcessObject::SetNumberOfOutputs | ( | unsigned int | num | ) | [protected, inherited] |
Called to allocate the output array. Copies old outputs.
| virtual void itk::ProcessObject::SetNumberOfRequiredInputs | ( | unsigned int | _arg | ) | [protected, virtual, inherited] |
| virtual void itk::ProcessObject::SetNumberOfRequiredOutputs | ( | unsigned int | _arg | ) | [protected, virtual, inherited] |
| virtual void itk::ProcessObject::SetNumberOfThreads | ( | int | _arg | ) | [virtual, inherited] |
Get/Set the number of threads to create when executing.
| virtual void itk::ProcessObject::SetProgress | ( | float | _arg | ) | [virtual, inherited] |
Set the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution. The ProgressEvent is NOT invoked.
| virtual void itk::Object::SetReferenceCount | ( | int | ) | [virtual, inherited] |
Sets the reference count (use with care)
Reimplemented from itk::LightObject.
| virtual void itk::ProcessObject::SetReleaseDataBeforeUpdateFlag | ( | bool | _arg | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.
| virtual void itk::ProcessObject::SetReleaseDataFlag | ( | bool | flag | ) | [virtual, inherited] |
Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.
| virtual void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::SetUseHistograms | ( | bool | _arg | ) | [virtual] |
| virtual int itk::ImageSource< TInputImage >::SplitRequestedRegion | ( | int | i, | |
| int | num, | |||
| OutputImageRegionType & | splitRegion | |||
| ) | [protected, virtual, inherited] |
Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". This method is called "num" times. The regions must not overlap. The method returns the number of pieces that the routine is capable of splitting the output RequestedRegion, i.e. return value is less than or equal to "num".
| virtual void itk::ImageSource< TInputImage >::ThreadedGenerateData | ( | const OutputImageRegionType & | outputRegionForThread, | |
| int | threadId | |||
| ) | [protected, virtual, inherited] |
If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). This superclass will automatically split the output image into a number of pieces, spawn multiple threads, and call ThreadedGenerateData() in each thread. Prior to spawning threads, the BeforeThreadedGenerateData() method is called. After all the threads have completed, the AfterThreadedGenerateData() method is called. If an image processing filter cannot support threading, that filter should provide an implementation of the GenerateData() method instead of providing an implementation of ThreadedGenerateData(). If a filter provides a GenerateData() method as its implementation, then the filter is responsible for allocating the output data. If a filter provides a ThreadedGenerateData() method as its implementation, then the output memory will allocated automatically by this superclass. The ThreadedGenerateData() method should only produce the output specified by "outputThreadRegion" parameter. ThreadedGenerateData() cannot write to any other portion of the output image (as this is responsibility of a different thread).
| void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::ThreadedGenerateData | ( | const RegionType & | outputRegionForThread, | |
| int | threadId | |||
| ) | [protected] |
Multi-thread version GenerateData.
| static ITK_THREAD_RETURN_TYPE itk::ImageSource< TInputImage >::ThreaderCallback | ( | void * | arg | ) | [static, protected, inherited] |
Static function used as a "callback" by the MultiThreader. The threading library will call this routine for each thread, which will delegate the control to ThreadedGenerateData().
| virtual void itk::Object::UnRegister | ( | ) | const [virtual, inherited] |
Decrease the reference count (release by another object).
Reimplemented from itk::LightObject.
| virtual void itk::ProcessObject::Update | ( | ) | [virtual, inherited] |
Bring this filter up-to-date. Update() checks modified times against last execution times, and re-executes objects if necessary. A side effect of this method is that the whole pipeline may execute in order to bring this filter up-to-date. This method updates the currently prescribed requested region. If no requested region has been set on the output, then the requested region will be set to the largest possible region. Once the requested region is set, Update() will make sure the specified requested region is up-to-date. This is a confusing side effect to users who are just calling Update() on a filter. A first call to Update() will cause the largest possible region to be updated. A second call to Update() will update that same region. If a modification to the upstream pipeline cause a filter to have a different largest possible region, this second call to Update() will not cause the output requested region to be reset to the new largest possible region. Instead, the output requested region will be the same as the last time Update() was called. To have a filter always to produce its largest possible region, users should call UpdateLargestPossibleRegion() instead.
Reimplemented in itk::CoreAtomImageToUnaryCorrespondenceMatrixProcess< TSourceImage >, itk::MedialNodePairCorrespondenceProcess< TSourceImage >, itk::MedialNodeTripletCorrespondenceProcess< TSourceImage >, itk::CoreAtomImageToDistanceMatrixProcess< TSourceImage >, itk::ImageFileWriter< TInputImage >, and itk::ImageSeriesWriter< TInputImage, TOutputImage >.
| virtual void itk::ProcessObject::UpdateLargestPossibleRegion | ( | ) | [virtual, inherited] |
Like Update(), but sets the output requested region to the largest possible region for the output. This is the method users should call if they want the entire dataset to be processed. If a user wants to update the same output region as a previous call to Update() or a previous call to UpdateLargestPossibleRegion(), then they should call the method Update().
| virtual void itk::ProcessObject::UpdateOutputData | ( | DataObject * | output | ) | [virtual, inherited] |
Actually generate new output
Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >.
| virtual void itk::ProcessObject::UpdateOutputInformation | ( | ) | [virtual, inherited] |
Update the information decribing the output data. This method transverses up the pipeline gathering modified time information. On the way back down the pipeline, this method calls GenerateOutputInformation() to set any necessary information about the output data objects. For instance, a filter that shrinks an image will need to provide an implementation for GenerateOutputInformation() that changes the spacing of the pixels. Such filters should call their superclass' implementation of GenerateOutputInformation prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.
Reimplemented in itk::watershed::Segmenter< TInputImage >, and itk::VTKImageImport< TOutputImage >.
| void itk::ProcessObject::UpdateProgress | ( | float | amount | ) | [inherited] |
Update the progress of the process object.
Sets the Progress ivar to amount and invokes any observers for the ProgressEvent. The parameter amount should be in [0,1] and is the cumulative (not incremental) progress.
| virtual void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::UseHistogramsOff | ( | ) | [virtual] |
| virtual void itk::LabelStatisticsImageFilter< TInputImage, TLabelImage >::UseHistogramsOn | ( | ) | [virtual] |
TimeStamp itk::ProcessObject::m_OutputInformationMTime [protected, inherited] |
Time when GenerateOutputInformation was last called.
Definition at line 431 of file itkProcessObject.h.
volatile int itk::LightObject::m_ReferenceCount [mutable, protected, inherited] |
Number of uses of this object by other objects.
Definition at line 119 of file itkLightObject.h.
SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited] |
Mutex lock to protect modification to the reference count
Definition at line 122 of file itkLightObject.h.
bool itk::ProcessObject::m_Updating [protected, inherited] |
This flag indicates when the pipeline is executing. It prevents infinite recursion when pipelines have loops.
Definition at line 428 of file itkProcessObject.h.
1.5.1 written by Dimitri van Heesch,
© 1997-2000