itk::BinaryGrindPeakImageFilter< TInputImage > Class Template Reference

#include <itkBinaryGrindPeakImageFilter.h>

Inheritance diagram for itk::BinaryGrindPeakImageFilter< TInputImage >:

Collaboration diagram for itk::BinaryGrindPeakImageFilter< TInputImage >:

List of all members.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef TInputImage	InputImageType
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TInputImage	OutputImageType
typedef SmartPointer< Self >	Pointer
typedef BinaryGrindPeakImageFilter	Self
typedef ImageToImageFilter < TInputImage, TInputImage >	Superclass
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual InputImagePixelType	GetBackgroundValue ()
virtual InputImagePixelType	GetForegroundValue ()
virtual const char *	GetNameOfClass () const
virtual void	SetBackgroundValue (InputImagePixelType _arg)
virtual void	SetForegroundValue (InputImagePixelType _arg)
	typedef (Concept::OStreamWritable< InputImagePixelType >) InputOStreamWritableCheck
virtual void	SetFullyConnected (bool _arg)
virtual const bool &	GetFullyConnected ()
virtual void	FullyConnectedOn ()
virtual void	FullyConnectedOff ()
Static Public Member Functions
static Pointer	New ()
Static Public Attributes
static const unsigned int	InputImageDimension = TInputImage::ImageDimension
static const unsigned int	OutputImageDimension = OutputImageType::ImageDimension
Protected Member Functions
	BinaryGrindPeakImageFilter ()
void	EnlargeOutputRequestedRegion (DataObject *)
void	GenerateData ()
void	GenerateInputRequestedRegion ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~BinaryGrindPeakImageFilter ()
Private Member Functions
	BinaryGrindPeakImageFilter (const Self &)
void	operator= (const Self &)
Private Attributes
InputImagePixelType	m_BackgroundValue
InputImagePixelType	m_ForegroundValue
bool	m_FullyConnected

---

Detailed Description

template<class TInputImage>
class itk::BinaryGrindPeakImageFilter< TInputImage >

Remove the objects not connected to the boundary of the image.

BinaryGrindPeakImageFilter ginds peaks in a grayscale image.

Geodesic morphology and the grind peak algorithm is described in Chapter 6 of Pierre Soille's book "Morphological Image Analysis: Principles and Applications", Second Edition, Springer, 2003.

Author:

Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also:

GrayscaleGrindPeakImageFilter

Definition at line 45 of file itkBinaryGrindPeakImageFilter.h.

---

Member Typedef Documentation

template<class TInputImage >

typedef SmartPointer<const Self> itk::BinaryGrindPeakImageFilter< TInputImage >::ConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 53 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef InputImageType::ConstPointer itk::BinaryGrindPeakImageFilter< TInputImage >::InputImageConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 59 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef InputImageType::PixelType itk::BinaryGrindPeakImageFilter< TInputImage >::InputImagePixelType

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 61 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef InputImageType::Pointer itk::BinaryGrindPeakImageFilter< TInputImage >::InputImagePointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 58 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef InputImageType::RegionType itk::BinaryGrindPeakImageFilter< TInputImage >::InputImageRegionType

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 60 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef TInputImage itk::BinaryGrindPeakImageFilter< TInputImage >::InputImageType

Some convenient typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 56 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef OutputImageType::ConstPointer itk::BinaryGrindPeakImageFilter< TInputImage >::OutputImageConstPointer

Definition at line 63 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef OutputImageType::PixelType itk::BinaryGrindPeakImageFilter< TInputImage >::OutputImagePixelType

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 65 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef OutputImageType::Pointer itk::BinaryGrindPeakImageFilter< TInputImage >::OutputImagePointer

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 62 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef OutputImageType::RegionType itk::BinaryGrindPeakImageFilter< TInputImage >::OutputImageRegionType

Superclass typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 64 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef TInputImage itk::BinaryGrindPeakImageFilter< TInputImage >::OutputImageType

Some convenient typedefs.

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 57 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef SmartPointer<Self> itk::BinaryGrindPeakImageFilter< TInputImage >::Pointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 52 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef BinaryGrindPeakImageFilter itk::BinaryGrindPeakImageFilter< TInputImage >::Self

Standard class typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 50 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

typedef ImageToImageFilter<TInputImage, TInputImage> itk::BinaryGrindPeakImageFilter< TInputImage >::Superclass

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 51 of file itkBinaryGrindPeakImageFilter.h.

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Constructor & Destructor Documentation

template<class TInputImage >

itk::BinaryGrindPeakImageFilter< TInputImage >::BinaryGrindPeakImageFilter

(

)

[protected]

template<class TInputImage >

itk::BinaryGrindPeakImageFilter< TInputImage >::~BinaryGrindPeakImageFilter

(

)

[inline, protected]

Definition at line 117 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

itk::BinaryGrindPeakImageFilter< TInputImage >::BinaryGrindPeakImageFilter

(

const Self &

)

[private]

---

Member Function Documentation

template<class TInputImage >

virtual::itk::LightObject::Pointer itk::BinaryGrindPeakImageFilter< TInputImage >::CreateAnother

(

void

)

const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputImage >

void itk::BinaryGrindPeakImageFilter< TInputImage >::EnlargeOutputRequestedRegion

(

DataObject *

)

[protected, virtual]

BinaryGrindPeakImageFilter will produce the entire output.

Reimplemented from itk::ProcessObject.

template<class TInputImage >

virtual void itk::BinaryGrindPeakImageFilter< TInputImage >::FullyConnectedOff

(

)

[virtual]

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage >

virtual void itk::BinaryGrindPeakImageFilter< TInputImage >::FullyConnectedOn

(

)

[virtual]

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage >

void itk::BinaryGrindPeakImageFilter< TInputImage >::GenerateData

(

)

[protected, virtual]

Single-threaded version of GenerateData. This filter delegates to GrayscaleGeodesicErodeImageFilter.

Reimplemented from itk::ImageSource< TInputImage >.

template<class TInputImage >

void itk::BinaryGrindPeakImageFilter< TInputImage >::GenerateInputRequestedRegion

(

)

[protected, virtual]

BinaryGrindPeakImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >

virtual InputImagePixelType itk::BinaryGrindPeakImageFilter< TInputImage >::GetBackgroundValue

(

)

[virtual]

Set the value in eroded part of the image. Defaults to zero

template<class TInputImage >

virtual InputImagePixelType itk::BinaryGrindPeakImageFilter< TInputImage >::GetForegroundValue

(

)

[virtual]

Get the value in the image considered as "foreground". Defaults to maximum value of InputPixelType.

template<class TInputImage >

virtual const bool& itk::BinaryGrindPeakImageFilter< TInputImage >::GetFullyConnected

(

)

[virtual]

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage >

virtual const char* itk::BinaryGrindPeakImageFilter< TInputImage >::GetNameOfClass

(

)

const [virtual]

Runtime information support.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >

static Pointer itk::BinaryGrindPeakImageFilter< TInputImage >::New

(

)

[static]

Standard New method.

Reimplemented from itk::Object.

template<class TInputImage >

void itk::BinaryGrindPeakImageFilter< TInputImage >::operator=

(

const Self &

)

[private]

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >

void itk::BinaryGrindPeakImageFilter< TInputImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >

virtual void itk::BinaryGrindPeakImageFilter< TInputImage >::SetBackgroundValue

(

InputImagePixelType

_arg

)

[virtual]

Set the value in eroded part of the image. Defaults to zero

template<class TInputImage >

virtual void itk::BinaryGrindPeakImageFilter< TInputImage >::SetForegroundValue

(

InputImagePixelType

_arg

)

[virtual]

End concept checking Set the value in the image to consider as "foreground". Defaults to maximum value of InputPixelType.

template<class TInputImage >

virtual void itk::BinaryGrindPeakImageFilter< TInputImage >::SetFullyConnected

(

bool

_arg

)

[virtual]

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage >

itk::BinaryGrindPeakImageFilter< TInputImage >::typedef

(

Concept::OStreamWritable< InputImagePixelType >

)

Begin concept checking This class requires InputOStreamWritableCheck in the form of (Concept::OStreamWritable<InputImagePixelType>)

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Member Data Documentation

template<class TInputImage >

const unsigned int itk::BinaryGrindPeakImageFilter< TInputImage >::InputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 69 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

InputImagePixelType itk::BinaryGrindPeakImageFilter< TInputImage >::m_BackgroundValue [private]

Definition at line 139 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

InputImagePixelType itk::BinaryGrindPeakImageFilter< TInputImage >::m_ForegroundValue [private]

Definition at line 137 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

bool itk::BinaryGrindPeakImageFilter< TInputImage >::m_FullyConnected [private]

Definition at line 141 of file itkBinaryGrindPeakImageFilter.h.

template<class TInputImage >

const unsigned int itk::BinaryGrindPeakImageFilter< TInputImage >::OutputImageDimension = OutputImageType::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 71 of file itkBinaryGrindPeakImageFilter.h.

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The documentation for this class was generated from the following file:

• itkBinaryGrindPeakImageFilter.h