ITK  4.1.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Member Functions | Private Attributes
itk::LabelShapeKeepNObjectsImageFilter< TInputImage > Class Template Reference

#include <itkLabelShapeKeepNObjectsImageFilter.h>

+ Inheritance diagram for itk::LabelShapeKeepNObjectsImageFilter< TInputImage >:
+ Collaboration diagram for itk::LabelShapeKeepNObjectsImageFilter< TInputImage >:

List of all members.

Public Types

typedef
LabelObjectType::AttributeType 
AttributeType
typedef
LabelMapToLabelImageFilter
< LabelMapType,
OutputImageType
BinarizerType
typedef SmartPointer< const SelfConstPointer
typedef
InputImageType::ConstPointer 
InputImageConstPointer
typedef InputImageType::PixelType InputImagePixelType
typedef InputImageType::Pointer InputImagePointer
typedef InputImageType::RegionType InputImageRegionType
typedef TInputImage InputImageType
typedef
ShapeKeepNObjectsLabelMapFilter
< LabelMapType
KeepNObjectsType
typedef
LabelImageToLabelMapFilter
< InputImageType, LabelMapType
LabelizerType
typedef LabelMap< LabelObjectTypeLabelMapType
typedef ShapeLabelObject
< InputImagePixelType,
itkGetStaticConstMacro(ImageDimension) > 
LabelObjectType
typedef ShapeLabelMapFilter
< LabelMapType,
ShapeLabelFilterOutput
LabelObjectValuatorType
typedef
OutputImageType::ConstPointer 
OutputImageConstPointer
typedef OutputImageType::PixelType OutputImagePixelType
typedef OutputImageType::Pointer OutputImagePointer
typedef OutputImageType::RegionType OutputImageRegionType
typedef TInputImage OutputImageType
typedef SmartPointer< SelfPointer
typedef
LabelShapeKeepNObjectsImageFilter 
Self
typedef Image< typename
OutputImageType::PixelType,
itkGetStaticConstMacro(OutputImageDimension) > 
ShapeLabelFilterOutput
typedef ImageToImageFilter
< TInputImage, TInputImage > 
Superclass

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual const char * GetNameOfClass () const
 typedef (Concept::EqualityComparable< InputImagePixelType >) InputEqualityComparableCheck
 typedef (Concept::Convertible< int, InputImagePixelType >) IntConvertibleToInputCheck
 typedef (Concept::OStreamWritable< InputImagePixelType >) InputOStreamWritableCheck
virtual void SetBackgroundValue (OutputImagePixelType _arg)
virtual OutputImagePixelType GetBackgroundValue () const
virtual SizeValueType GetNumberOfObjects () const
virtual void SetNumberOfObjects (SizeValueType _arg)
virtual bool GetReverseOrdering () const
virtual void SetReverseOrdering (bool _arg)
virtual void ReverseOrderingOn ()
virtual void ReverseOrderingOff ()
virtual AttributeType GetAttribute () const
virtual void SetAttribute (AttributeType _arg)
void SetAttribute (const std::string &s)

Static Public Member Functions

static Pointer New ()

Static Public Attributes

static const unsigned int InputImageDimension = TInputImage::ImageDimension
static const unsigned int OutputImageDimension = TInputImage::ImageDimension
static const unsigned int ImageDimension = TInputImage::ImageDimension

Protected Member Functions

void EnlargeOutputRequestedRegion (DataObject *)
void GenerateData ()
void GenerateInputRequestedRegion ()
 LabelShapeKeepNObjectsImageFilter ()
void PrintSelf (std::ostream &os, Indent indent) const
 ~LabelShapeKeepNObjectsImageFilter ()

Private Member Functions

 LabelShapeKeepNObjectsImageFilter (const Self &)
void operator= (const Self &)

Private Attributes

AttributeType m_Attribute
OutputImagePixelType m_BackgroundValue
SizeValueType m_NumberOfObjects
bool m_ReverseOrdering

Detailed Description

template<class TInputImage>
class itk::LabelShapeKeepNObjectsImageFilter< TInputImage >

keep N objects according to their shape attributes

LabelShapeKeepNObjectsImageFilter keep the N objects in a labeled image with the highest (or lowest) attribute value. The attributes are the ones of the ShapeLabelObject.

Author:
Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also:
ShapeLabelObject, BinaryShapeKeepNObjectsImageFilter, LabelStatisticsKeepNObjectsImageFilter
Wiki Examples:

Definition at line 51 of file itkLabelShapeKeepNObjectsImageFilter.h.


Member Typedef Documentation

Definition at line 89 of file itkLabelShapeKeepNObjectsImageFilter.h.

Definition at line 91 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef SmartPointer< const Self > itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::ConstPointer
template<class TInputImage >
typedef InputImageType::ConstPointer itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::InputImageConstPointer
template<class TInputImage >
typedef InputImageType::PixelType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::InputImagePixelType
template<class TInputImage >
typedef InputImageType::Pointer itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::InputImagePointer
template<class TInputImage >
typedef InputImageType::RegionType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::InputImageRegionType
template<class TInputImage >
typedef TInputImage itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::InputImageType

Some convenient typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 62 of file itkLabelShapeKeepNObjectsImageFilter.h.

Definition at line 90 of file itkLabelShapeKeepNObjectsImageFilter.h.

Definition at line 84 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef LabelMap< LabelObjectType > itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::LabelMapType

Definition at line 83 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef ShapeLabelObject< InputImagePixelType, itkGetStaticConstMacro(ImageDimension) > itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::LabelObjectType

Definition at line 82 of file itkLabelShapeKeepNObjectsImageFilter.h.

Definition at line 88 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef OutputImageType::ConstPointer itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::OutputImageConstPointer

Definition at line 69 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef OutputImageType::PixelType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::OutputImagePixelType
template<class TInputImage >
typedef OutputImageType::Pointer itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::OutputImagePointer

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 68 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef OutputImageType::RegionType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::OutputImageRegionType

Superclass typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 70 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef TInputImage itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::OutputImageType

Some convenient typedefs.

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 63 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef SmartPointer< Self > itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::Pointer

Standard class typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 56 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef Image< typename OutputImageType::PixelType, itkGetStaticConstMacro(OutputImageDimension) > itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::ShapeLabelFilterOutput

Definition at line 86 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
typedef ImageToImageFilter< TInputImage, TInputImage > itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::Superclass

Constructor & Destructor Documentation

template<class TInputImage >
itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::LabelShapeKeepNObjectsImageFilter ( ) [protected]
template<class TInputImage >
itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::~LabelShapeKeepNObjectsImageFilter ( ) [inline, protected]

Definition at line 151 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::LabelShapeKeepNObjectsImageFilter ( const Self ) [private]

Member Function Documentation

template<class TInputImage >
virtual::itk::LightObject::Pointer itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::CreateAnother ( void  ) const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputImage >
void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::EnlargeOutputRequestedRegion ( DataObject ) [protected, virtual]

LabelShapeKeepNObjectsImageFilter will produce the entire output.

Reimplemented from itk::ProcessObject.

template<class TInputImage >
void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GenerateData ( ) [protected, virtual]

Single-threaded version of GenerateData. This filter delegates to GrayscaleGeodesicErodeImageFilter.

Reimplemented from itk::ImageSource< TInputImage >.

template<class TInputImage >
void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GenerateInputRequestedRegion ( ) [protected, virtual]

LabelShapeKeepNObjectsImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >
virtual AttributeType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GetAttribute ( ) const [virtual]

Set/Get the attribute to use to select the object to keep. The default is "Size".

template<class TInputImage >
virtual OutputImagePixelType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GetBackgroundValue ( ) const [virtual]

End concept checking Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().

template<class TInputImage >
virtual const char* itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GetNameOfClass ( ) const [virtual]

Runtime information support.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >
virtual SizeValueType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GetNumberOfObjects ( ) const [virtual]

Set/Get the number of objects to keep

template<class TInputImage >
virtual bool itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::GetReverseOrdering ( ) const [virtual]

Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values

template<class TInputImage >
static Pointer itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::New ( ) [static]

Standard New method.

Reimplemented from itk::Object.

template<class TInputImage >
void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::operator= ( const Self ) [private]

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >
void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage >
virtual void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::ReverseOrderingOff ( ) [virtual]

Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values

template<class TInputImage >
virtual void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::ReverseOrderingOn ( ) [virtual]

Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values

template<class TInputImage >
virtual void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::SetAttribute ( AttributeType  _arg) [virtual]

Set/Get the attribute to use to select the object to keep. The default is "Size".

template<class TInputImage >
void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::SetAttribute ( const std::string &  s) [inline]

Set/Get the attribute to use to select the object to keep. The default is "Size".

Definition at line 143 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
virtual void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::SetBackgroundValue ( OutputImagePixelType  _arg) [virtual]

End concept checking Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().

template<class TInputImage >
virtual void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::SetNumberOfObjects ( SizeValueType  _arg) [virtual]

Set/Get the number of objects to keep

template<class TInputImage >
virtual void itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::SetReverseOrdering ( bool  _arg) [virtual]

Set/Get the ordering of the objects. By default, the ones with the highest value are kept. Turming ReverseOrdering to true make this filter keep the objects with the smallest values

Begin concept checking This class requires InputEqualityComparableCheck in the form of ( Concept::EqualityComparable< InputImagePixelType > )

template<class TInputImage >
itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::typedef ( Concept::Convertible< int, InputImagePixelType )

This class requires IntConvertibleToInputCheck in the form of ( Concept::Convertible< int, InputImagePixelType > )

template<class TInputImage >
itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::typedef ( Concept::OStreamWritable< InputImagePixelType )

This class requires InputOStreamWritableCheck in the form of ( Concept::OStreamWritable< InputImagePixelType > )


Member Data Documentation

template<class TInputImage >
const unsigned int itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::ImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Definition at line 79 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
const unsigned int itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::InputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 75 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
AttributeType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::m_Attribute [private]

Definition at line 173 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
OutputImagePixelType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::m_BackgroundValue [private]

Definition at line 170 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
SizeValueType itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::m_NumberOfObjects [private]

Definition at line 171 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
bool itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::m_ReverseOrdering [private]

Definition at line 172 of file itkLabelShapeKeepNObjectsImageFilter.h.

template<class TInputImage >
const unsigned int itk::LabelShapeKeepNObjectsImageFilter< TInputImage >::OutputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 77 of file itkLabelShapeKeepNObjectsImageFilter.h.


The documentation for this class was generated from the following file: