ITK  4.1.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Member Functions | Private Attributes
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage > Class Template Reference

#include <itkLabelStatisticsOpeningImageFilter.h>

+ Inheritance diagram for itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >:
+ Collaboration diagram for itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >:

List of all members.

Public Types

typedef
LabelObjectType::AttributeType 
AttributeType
typedef
LabelMapToLabelImageFilter
< LabelMapType,
OutputImageType
BinarizerType
typedef SmartPointer< const SelfConstPointer
typedef
FeatureImageType::ConstPointer 
FeatureImageConstPointer
typedef FeatureImageType::PixelType FeatureImagePixelType
typedef FeatureImageType::Pointer FeatureImagePointer
typedef TFeatureImage FeatureImageType
typedef
InputImageType::ConstPointer 
InputImageConstPointer
typedef InputImageType::PixelType InputImagePixelType
typedef InputImageType::Pointer InputImagePointer
typedef InputImageType::RegionType InputImageRegionType
typedef TInputImage InputImageType
typedef
LabelImageToLabelMapFilter
< InputImageType, LabelMapType
LabelizerType
typedef LabelMap< LabelObjectTypeLabelMapType
typedef StatisticsLabelObject
< InputImagePixelType,
itkGetStaticConstMacro(ImageDimension) > 
LabelObjectType
typedef
StatisticsLabelMapFilter
< LabelMapType, TFeatureImage > 
LabelObjectValuatorType
typedef
StatisticsOpeningLabelMapFilter
< LabelMapType
OpeningType
typedef
OutputImageType::ConstPointer 
OutputImageConstPointer
typedef OutputImageType::PixelType OutputImagePixelType
typedef OutputImageType::Pointer OutputImagePointer
typedef OutputImageType::RegionType OutputImageRegionType
typedef TInputImage OutputImageType
typedef SmartPointer< SelfPointer
typedef
LabelStatisticsOpeningImageFilter 
Self
typedef ImageToImageFilter
< TInputImage, TInputImage > 
Superclass

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
const FeatureImageTypeGetFeatureImage ()
virtual const char * GetNameOfClass () const
void SetFeatureImage (const TFeatureImage *input)
void SetInput1 (const InputImageType *input)
void SetInput2 (const FeatureImageType *input)
 typedef (Concept::EqualityComparable< InputImagePixelType >) InputEqualityComparableCheck
 typedef (Concept::Convertible< int, InputImagePixelType >) IntConvertibleToInputCheck
 typedef (Concept::OStreamWritable< InputImagePixelType >) InputOStreamWritableCheck
virtual void SetBackgroundValue (OutputImagePixelType _arg)
virtual OutputImagePixelType GetBackgroundValue () const
virtual double GetLambda () const
virtual void SetLambda (double _arg)
virtual bool GetReverseOrdering () const
virtual void SetReverseOrdering (bool _arg)
virtual void ReverseOrderingOn ()
virtual void ReverseOrderingOff ()
virtual AttributeType GetAttribute () const
virtual void SetAttribute (AttributeType _arg)
void SetAttribute (const std::string &s)

Static Public Member Functions

static Pointer New ()

Static Public Attributes

static const unsigned int InputImageDimension = TInputImage::ImageDimension
static const unsigned int OutputImageDimension = TInputImage::ImageDimension
static const unsigned int ImageDimension = TInputImage::ImageDimension

Protected Member Functions

void EnlargeOutputRequestedRegion (DataObject *)
void GenerateData ()
void GenerateInputRequestedRegion ()
 LabelStatisticsOpeningImageFilter ()
void PrintSelf (std::ostream &os, Indent indent) const
 ~LabelStatisticsOpeningImageFilter ()

Private Member Functions

 LabelStatisticsOpeningImageFilter (const Self &)
void operator= (const Self &)

Private Attributes

AttributeType m_Attribute
OutputImagePixelType m_BackgroundValue
double m_Lambda
bool m_ReverseOrdering

Detailed Description

template<class TInputImage, class TFeatureImage>
class itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >

remove the objects according to the value of their statistics attribute

LabelStatisticsOpeningImageFilter removes the objects in a labeled image with an attribute value smaller or greater than a threshold called Lambda. The attributes are the ones of the StatisticsLabelObject.

Author:
Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also:
StatisticsLabelObject, BinaryStatisticsOpeningImageFilter, LabelShapeOpeningImageFilter

Definition at line 46 of file itkLabelStatisticsOpeningImageFilter.h.


Member Typedef Documentation

template<class TInputImage , class TFeatureImage >
typedef LabelObjectType::AttributeType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::AttributeType

Definition at line 86 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef LabelMapToLabelImageFilter< LabelMapType, OutputImageType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::BinarizerType

Definition at line 88 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef SmartPointer< const Self > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ConstPointer
template<class TInputImage , class TFeatureImage >
typedef FeatureImageType::ConstPointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImageConstPointer

Definition at line 70 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef FeatureImageType::PixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImagePixelType

Definition at line 71 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef FeatureImageType::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImagePointer

Definition at line 69 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef TFeatureImage itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImageType

Definition at line 68 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef InputImageType::ConstPointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageConstPointer
template<class TInputImage , class TFeatureImage >
typedef InputImageType::PixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImagePixelType
template<class TInputImage , class TFeatureImage >
typedef InputImageType::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImagePointer
template<class TInputImage , class TFeatureImage >
typedef InputImageType::RegionType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageRegionType
template<class TInputImage , class TFeatureImage >
typedef TInputImage itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageType

Some convenient typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 57 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef LabelImageToLabelMapFilter< InputImageType, LabelMapType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelizerType

Definition at line 84 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef LabelMap< LabelObjectType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelMapType

Definition at line 83 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef StatisticsLabelObject< InputImagePixelType, itkGetStaticConstMacro(ImageDimension) > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelObjectType

Definition at line 82 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef StatisticsLabelMapFilter< LabelMapType, TFeatureImage > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelObjectValuatorType

Definition at line 85 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef StatisticsOpeningLabelMapFilter< LabelMapType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OpeningType

Definition at line 87 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef OutputImageType::ConstPointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageConstPointer

Definition at line 64 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef OutputImageType::PixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImagePixelType
template<class TInputImage , class TFeatureImage >
typedef OutputImageType::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImagePointer

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 63 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef OutputImageType::RegionType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageRegionType

Superclass typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 65 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef TInputImage itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageType

Some convenient typedefs.

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 58 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef SmartPointer< Self > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::Pointer
template<class TInputImage , class TFeatureImage >
typedef LabelStatisticsOpeningImageFilter itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::Self

Standard class typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 51 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
typedef ImageToImageFilter< TInputImage, TInputImage > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::Superclass

Constructor & Destructor Documentation

template<class TInputImage , class TFeatureImage >
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelStatisticsOpeningImageFilter ( ) [protected]
template<class TInputImage , class TFeatureImage >
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::~LabelStatisticsOpeningImageFilter ( ) [inline, protected]

Definition at line 174 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelStatisticsOpeningImageFilter ( const Self ) [private]

Member Function Documentation

template<class TInputImage , class TFeatureImage >
virtual::itk::LightObject::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::CreateAnother ( void  ) const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::EnlargeOutputRequestedRegion ( DataObject ) [protected, virtual]

LabelStatisticsOpeningImageFilter will produce the entire output.

Reimplemented from itk::ProcessObject.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GenerateData ( ) [protected, virtual]

Single-threaded version of GenerateData. This filter delegates to GrayscaleGeodesicErodeImageFilter.

Reimplemented from itk::ImageSource< TInputImage >.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GenerateInputRequestedRegion ( ) [protected, virtual]

LabelStatisticsOpeningImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >
virtual AttributeType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetAttribute ( ) const [virtual]

Set/Get the attribute to use to select the object to remove. The default is "Mean".

template<class TInputImage , class TFeatureImage >
virtual OutputImagePixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetBackgroundValue ( ) const [virtual]

End concept checking Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().

template<class TInputImage , class TFeatureImage >
const FeatureImageType* itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetFeatureImage ( ) [inline]

Get the feature image

Definition at line 155 of file itkLabelStatisticsOpeningImageFilter.h.

References itk::ProcessObject::GetInput().

template<class TInputImage , class TFeatureImage >
virtual double itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetLambda ( ) const [virtual]

Set/Get the threshold used to keep or remove the objects.

template<class TInputImage , class TFeatureImage >
virtual const char* itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetNameOfClass ( ) const [virtual]

Runtime information support.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >
virtual bool itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetReverseOrdering ( ) const [virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >
static Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::New ( ) [static]

Standard New method.

Reimplemented from itk::Object.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::operator= ( const Self ) [private]

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >
virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ReverseOrderingOff ( ) [virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >
virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ReverseOrderingOn ( ) [virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >
virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetAttribute ( AttributeType  _arg) [virtual]

Set/Get the attribute to use to select the object to remove. The default is "Mean".

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetAttribute ( const std::string &  s) [inline]

Set/Get the attribute to use to select the object to remove. The default is "Mean".

Definition at line 141 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetBackgroundValue ( OutputImagePixelType  _arg) [virtual]

End concept checking Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetFeatureImage ( const TFeatureImage *  input) [inline]

Set the feature image

Definition at line 148 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetInput1 ( const InputImageType input) [inline]

Set the input image

Definition at line 161 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetInput2 ( const FeatureImageType input) [inline]

Set the feature image

Definition at line 167 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetLambda ( double  _arg) [virtual]

Set/Get the threshold used to keep or remove the objects.

template<class TInputImage , class TFeatureImage >
virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetReverseOrdering ( bool  _arg) [virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::typedef ( Concept::EqualityComparable< InputImagePixelType )

Begin concept checking This class requires InputEqualityComparableCheck in the form of ( Concept::EqualityComparable< InputImagePixelType > )

template<class TInputImage , class TFeatureImage >
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::typedef ( Concept::Convertible< int, InputImagePixelType )

This class requires IntConvertibleToInputCheck in the form of ( Concept::Convertible< int, InputImagePixelType > )

template<class TInputImage , class TFeatureImage >
itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::typedef ( Concept::OStreamWritable< InputImagePixelType )

This class requires InputOStreamWritableCheck in the form of ( Concept::OStreamWritable< InputImagePixelType > )


Member Data Documentation

template<class TInputImage , class TFeatureImage >
const unsigned int itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Definition at line 79 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
const unsigned int itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 75 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
AttributeType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_Attribute [private]

Definition at line 196 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
OutputImagePixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_BackgroundValue [private]

Definition at line 193 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
double itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_Lambda [private]

Definition at line 194 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
bool itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_ReverseOrdering [private]

Definition at line 195 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >
const unsigned int itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 77 of file itkLabelStatisticsOpeningImageFilter.h.


The documentation for this class was generated from the following file: