itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage > Class Template Reference

#include <itkLabelStatisticsOpeningImageFilter.h>

Inheritance diagram for itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >:

Collaboration diagram for itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >:

List of all members.

Public Types
typedef LabelObjectType::AttributeType	AttributeType
typedef LabelMapToLabelImageFilter < LabelMapType, OutputImageType >	BinarizerType
typedef SmartPointer< const Self >	ConstPointer
typedef FeatureImageType::ConstPointer	FeatureImageConstPointer
typedef FeatureImageType::PixelType	FeatureImagePixelType
typedef FeatureImageType::Pointer	FeatureImagePointer
typedef TFeatureImage	FeatureImageType
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef TInputImage	InputImageType
typedef LabelImageToLabelMapFilter < InputImageType, LabelMapType >	LabelizerType
typedef LabelMap< LabelObjectType >	LabelMapType
typedef StatisticsLabelObject < InputImagePixelType, itkGetStaticConstMacro(ImageDimension) >	LabelObjectType
typedef StatisticsLabelMapFilter < LabelMapType, TFeatureImage >	LabelObjectValuatorType
typedef StatisticsOpeningLabelMapFilter < LabelMapType >	OpeningType
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TInputImage	OutputImageType
typedef SmartPointer< Self >	Pointer
typedef LabelStatisticsOpeningImageFilter	Self
typedef ImageToImageFilter < TInputImage, TInputImage >	Superclass
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
const FeatureImageType *	GetFeatureImage ()
virtual const char *	GetNameOfClass () const
void	SetFeatureImage (const TFeatureImage *input)
void	SetInput1 (const InputImageType *input)
void	SetInput2 (const FeatureImageType *input)
	typedef (Concept::EqualityComparable< InputImagePixelType >) InputEqualityComparableCheck
	typedef (Concept::Convertible< int, InputImagePixelType >) IntConvertibleToInputCheck
	typedef (Concept::OStreamWritable< InputImagePixelType >) InputOStreamWritableCheck
virtual void	SetBackgroundValue (OutputImagePixelType _arg)
virtual OutputImagePixelType	GetBackgroundValue () const
virtual double	GetLambda () const
virtual void	SetLambda (double _arg)
virtual bool	GetReverseOrdering () const
virtual void	SetReverseOrdering (bool _arg)
virtual void	ReverseOrderingOn ()
virtual void	ReverseOrderingOff ()
virtual AttributeType	GetAttribute () const
virtual void	SetAttribute (AttributeType _arg)
void	SetAttribute (const std::string &s)
Static Public Member Functions
static Pointer	New ()
Static Public Attributes
static const unsigned int	InputImageDimension = TInputImage::ImageDimension
static const unsigned int	OutputImageDimension = TInputImage::ImageDimension
static const unsigned int	ImageDimension = TInputImage::ImageDimension
Protected Member Functions
void	EnlargeOutputRequestedRegion (DataObject *)
void	GenerateData ()
void	GenerateInputRequestedRegion ()
	LabelStatisticsOpeningImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~LabelStatisticsOpeningImageFilter ()
Private Member Functions
	LabelStatisticsOpeningImageFilter (const Self &)
void	operator= (const Self &)
Private Attributes
AttributeType	m_Attribute
OutputImagePixelType	m_BackgroundValue
double	m_Lambda
bool	m_ReverseOrdering

---

Detailed Description

template<class TInputImage, class TFeatureImage>
class itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >

remove the objects according to the value of their statistics attribute

LabelStatisticsOpeningImageFilter removes the objects in a labeled image with an attribute value smaller or greater than a threshold called Lambda. The attributes are the ones of the StatisticsLabelObject.

Author:

Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also:

StatisticsLabelObject, BinaryStatisticsOpeningImageFilter, LabelShapeOpeningImageFilter

Definition at line 46 of file itkLabelStatisticsOpeningImageFilter.h.

---

Member Typedef Documentation

template<class TInputImage , class TFeatureImage >

typedef LabelObjectType::AttributeType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::AttributeType

Definition at line 86 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef LabelMapToLabelImageFilter< LabelMapType, OutputImageType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::BinarizerType

Definition at line 88 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef SmartPointer< const Self > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 54 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::ConstPointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImageConstPointer

Definition at line 70 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::PixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImagePixelType

Definition at line 71 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImagePointer

Definition at line 69 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef TFeatureImage itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::FeatureImageType

Definition at line 68 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::ConstPointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 60 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::PixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImagePixelType

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 62 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImagePointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 59 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::RegionType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageRegionType

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 61 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef TInputImage itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageType

Some convenient typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 57 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef LabelImageToLabelMapFilter< InputImageType, LabelMapType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelizerType

Definition at line 84 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef LabelMap< LabelObjectType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelMapType

Definition at line 83 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef StatisticsLabelObject< InputImagePixelType, itkGetStaticConstMacro(ImageDimension) > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelObjectType

Definition at line 82 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef StatisticsLabelMapFilter< LabelMapType, TFeatureImage > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelObjectValuatorType

Definition at line 85 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef StatisticsOpeningLabelMapFilter< LabelMapType > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OpeningType

Definition at line 87 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef OutputImageType::ConstPointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageConstPointer

Definition at line 64 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef OutputImageType::PixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImagePixelType

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 66 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef OutputImageType::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImagePointer

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 63 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef OutputImageType::RegionType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageRegionType

Superclass typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 65 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef TInputImage itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageType

Some convenient typedefs.

Reimplemented from itk::ImageSource< TInputImage >.

Definition at line 58 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef SmartPointer< Self > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::Pointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 53 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef LabelStatisticsOpeningImageFilter itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::Self

Standard class typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 51 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

typedef ImageToImageFilter< TInputImage, TInputImage > itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::Superclass

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 52 of file itkLabelStatisticsOpeningImageFilter.h.

---

Constructor & Destructor Documentation

template<class TInputImage , class TFeatureImage >

itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelStatisticsOpeningImageFilter

(

)

[protected]

template<class TInputImage , class TFeatureImage >

itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::~LabelStatisticsOpeningImageFilter

(

)

[inline, protected]

Definition at line 174 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::LabelStatisticsOpeningImageFilter

(

const Self &

)

[private]

---

Member Function Documentation

template<class TInputImage , class TFeatureImage >

virtual::itk::LightObject::Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::CreateAnother

(

void

)

const [virtual]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::EnlargeOutputRequestedRegion

(

DataObject *

)

[protected, virtual]

LabelStatisticsOpeningImageFilter will produce the entire output.

Reimplemented from itk::ProcessObject.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GenerateData

(

)

[protected, virtual]

Single-threaded version of GenerateData. This filter delegates to GrayscaleGeodesicErodeImageFilter.

Reimplemented from itk::ImageSource< TInputImage >.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GenerateInputRequestedRegion

(

)

[protected, virtual]

LabelStatisticsOpeningImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >

virtual AttributeType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetAttribute

(

)

const [virtual]

Set/Get the attribute to use to select the object to remove. The default is "Mean".

template<class TInputImage , class TFeatureImage >

virtual OutputImagePixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetBackgroundValue

(

)

const [virtual]

End concept checking Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().

template<class TInputImage , class TFeatureImage >

const FeatureImageType* itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetFeatureImage

(

)

[inline]

Get the feature image

Definition at line 155 of file itkLabelStatisticsOpeningImageFilter.h.

References itk::ProcessObject::GetInput().

template<class TInputImage , class TFeatureImage >

virtual double itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetLambda

(

)

const [virtual]

Set/Get the threshold used to keep or remove the objects.

template<class TInputImage , class TFeatureImage >

virtual const char* itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetNameOfClass

(

)

const [virtual]

Runtime information support.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >

virtual bool itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::GetReverseOrdering

(

)

const [virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >

static Pointer itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::New

(

)

[static]

Standard New method.

Reimplemented from itk::Object.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::operator=

(

const Self &

)

[private]

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const [protected, virtual]

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

template<class TInputImage , class TFeatureImage >

virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ReverseOrderingOff

(

)

[virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >

virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ReverseOrderingOn

(

)

[virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >

virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetAttribute

(

AttributeType

_arg

)

[virtual]

Set/Get the attribute to use to select the object to remove. The default is "Mean".

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetAttribute

(

const std::string &

s

)

[inline]

Set/Get the attribute to use to select the object to remove. The default is "Mean".

Definition at line 141 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetBackgroundValue

(

OutputImagePixelType

_arg

)

[virtual]

End concept checking Set/Get the value used as "background" in the output image. Defaults to NumericTraits<PixelType>::NonpositiveMin().

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetFeatureImage

(

const TFeatureImage *

input

)

[inline]

Set the feature image

Definition at line 148 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetInput1

(

const InputImageType *

input

)

[inline]

Set the input image

Definition at line 161 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetInput2

(

const FeatureImageType *

input

)

[inline]

Set the feature image

Definition at line 167 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetLambda

(

double

_arg

)

[virtual]

Set/Get the threshold used to keep or remove the objects.

template<class TInputImage , class TFeatureImage >

virtual void itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::SetReverseOrdering

(

bool

_arg

)

[virtual]

Set/Get the ordering of the objects. By default, the objects with an attribute value smaller than Lamba are removed. Turning ReverseOrdering to true make this filter remove the object with an attribute value greater than Lambda instead.

template<class TInputImage , class TFeatureImage >

itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::typedef

(

Concept::EqualityComparable< InputImagePixelType >

)

Begin concept checking This class requires InputEqualityComparableCheck in the form of ( Concept::EqualityComparable< InputImagePixelType > )

template<class TInputImage , class TFeatureImage >

itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::typedef

(

Concept::Convertible< int, InputImagePixelType >

)

This class requires IntConvertibleToInputCheck in the form of ( Concept::Convertible< int, InputImagePixelType > )

template<class TInputImage , class TFeatureImage >

itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::typedef

(

Concept::OStreamWritable< InputImagePixelType >

)

This class requires InputOStreamWritableCheck in the form of ( Concept::OStreamWritable< InputImagePixelType > )

---

Member Data Documentation

template<class TInputImage , class TFeatureImage >

const unsigned int itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::ImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Definition at line 79 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

const unsigned int itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::InputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 75 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

AttributeType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_Attribute [private]

Definition at line 196 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

OutputImagePixelType itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_BackgroundValue [private]

Definition at line 193 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

double itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_Lambda [private]

Definition at line 194 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

bool itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::m_ReverseOrdering [private]

Definition at line 195 of file itkLabelStatisticsOpeningImageFilter.h.

template<class TInputImage , class TFeatureImage >

const unsigned int itk::LabelStatisticsOpeningImageFilter< TInputImage, TFeatureImage >::OutputImageDimension = TInputImage::ImageDimension [static]

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TInputImage, TInputImage >.

Definition at line 77 of file itkLabelStatisticsOpeningImageFilter.h.

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The documentation for this class was generated from the following file:

• itkLabelStatisticsOpeningImageFilter.h