ITK
4.1.0
Insight Segmentation and Registration Toolkit
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#include <itkSegmentationLevelSetImageFilter.h>
A base class which defines the API for implementing a special class of image segmentation filters using level set methods.
TInputImage is the image type of the initial model you will input to the filter using SetInput() or SetInitialImage().
TFeatureImage is the image type of the image from which the filter will calculate the speed term for segmentation (see INPUTS).
TOutputPixelType is the data type used for the output image phi, the implicit level set image. This should really only ever be set as float (default) or double.
You must identify the initial front (surface) in the input image. You do this by specifying its isovalue through the method SetIsoSurfaceValue(float f). The algorithm will then initialize its solution using the front represented by value f. Note that the front is always represented by isosurface zero in the output and not the isosurface you specified for the input. This is because, for simplicity, the filter will shift your input image so that the active front has zero values.
This parameter can be safely changed as appropriate for a particular application or data set to achieve the desired behavior.
Definition at line 145 of file itkSegmentationLevelSetImageFilter.h.
typedef SmartPointer< const Self > itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ConstPointer |
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 162 of file itkSegmentationLevelSetImageFilter.h.
typedef TFeatureImage itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::FeatureImageType |
Local image typedefs
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 171 of file itkSegmentationLevelSetImageFilter.h.
typedef Superclass::IndexType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::IndexType |
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Definition at line 166 of file itkSegmentationLevelSetImageFilter.h.
typedef Superclass::InputImageType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::InputImageType |
Information derived from the image types.
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Definition at line 168 of file itkSegmentationLevelSetImageFilter.h.
typedef Image< TOutputPixelType, itkGetStaticConstMacro(InputImageDimension) > itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::OutputImageType |
Output image type typedefs
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 157 of file itkSegmentationLevelSetImageFilter.h.
typedef SmartPointer< Self > itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::Pointer |
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 161 of file itkSegmentationLevelSetImageFilter.h.
typedef SegmentationLevelSetFunction< OutputImageType, FeatureImageType > itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SegmentationFunctionType |
The generic level set function type
Definition at line 175 of file itkSegmentationLevelSetImageFilter.h.
typedef SegmentationLevelSetImageFilter itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::Self |
Inherited typedef from the superclass. Needs to be placed before the next macro.
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 152 of file itkSegmentationLevelSetImageFilter.h.
typedef SegmentationFunctionType::ImageType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SpeedImageType |
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 179 of file itkSegmentationLevelSetImageFilter.h.
typedef SparseFieldLevelSetImageFilter< TInputImage, OutputImageType > itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::Superclass |
Standard class typedefs
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 160 of file itkSegmentationLevelSetImageFilter.h.
typedef Superclass::TimeStepType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::TimeStepType |
Typedefs from the superclass
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Definition at line 167 of file itkSegmentationLevelSetImageFilter.h.
typedef Superclass::ValueType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ValueType |
Inherited typedef from the superclass.
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 165 of file itkSegmentationLevelSetImageFilter.h.
typedef SegmentationFunctionType::VectorImageType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::VectorImageType |
The type used for the advection field
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 178 of file itkSegmentationLevelSetImageFilter.h.
virtual itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::~SegmentationLevelSetImageFilter | ( | ) | [inline, protected, virtual] |
End concept checking
Definition at line 488 of file itkSegmentationLevelSetImageFilter.h.
itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SegmentationLevelSetImageFilter | ( | ) | [protected] |
itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SegmentationLevelSetImageFilter | ( | const Self & | ) | [private] |
Flag to indicate whether Speed and Advection images are automatically generated when running the filter. Otherwise, a pointer to images must be explicitly set or GenerateSpeedImage() and/or GenerateAdvectionImage() called directly before updating the filter
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::AutoGenerateSpeedAdvectionOff | ( | ) | [virtual] |
Turn On/Off automatic generation of Speed and Advection terms when Update is called. If set to Off, the Speed and Advection images must be set explicitly using SetSpeedImage, SetAdvectionImage OR the methods GenerateSpeedImage() and GenerateAdvectionImage() should be called prior to updating the filter.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::AutoGenerateSpeedAdvectionOn | ( | ) | [virtual] |
Turn On/Off automatic generation of Speed and Advection terms when Update is called. If set to Off, the Speed and Advection images must be set explicitly using SetSpeedImage, SetAdvectionImage OR the methods GenerateSpeedImage() and GenerateAdvectionImage() should be called prior to updating the filter.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GenerateAdvectionImage | ( | ) |
Allocate and calculate the advection term image in the SegmentationFunction object This method is called automatically on filter execution unless AutoGenerateSpeedAdvection is set to Off.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GenerateData | ( | ) | [protected, virtual] |
Overridden from ProcessObject to set certain values before starting the finite difference solver and then create an appropriate output
Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GenerateSpeedImage | ( | ) |
Allocate and calculate the speed term image in the SegmentationFunction object. This method is called automatically on filter execution unless AutoGenerateSpeedAdvection is set to Off.
virtual const VectorImageType* itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetAdvectionImage | ( | ) | const [inline, virtual] |
Return a pointer to the image sampled as the advection term of the segmentation algorithm.
Definition at line 243 of file itkSegmentationLevelSetImageFilter.h.
ValueType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetAdvectionScaling | ( | ) | const [inline] |
Definition at line 362 of file itkSegmentationLevelSetImageFilter.h.
virtual bool itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetAutoGenerateSpeedAdvection | ( | ) | const [virtual] |
Turn On/Off automatic generation of Speed and Advection terms when Update is called. If set to Off, the Speed and Advection images must be set explicitly using SetSpeedImage, SetAdvectionImage OR the methods GenerateSpeedImage() and GenerateAdvectionImage() should be called prior to updating the filter.
ValueType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetCurvatureScaling | ( | ) | const [inline] |
Definition at line 381 of file itkSegmentationLevelSetImageFilter.h.
virtual FeatureImageType* itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetFeatureImage | ( | ) | [inline, virtual] |
Definition at line 208 of file itkSegmentationLevelSetImageFilter.h.
References itk::ProcessObject::GetInput().
double itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetMaximumCurvatureTimeStep | ( | ) | const [inline] |
Definition at line 446 of file itkSegmentationLevelSetImageFilter.h.
unsigned int itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetMaximumIterations | ( | ) | [inline] |
Definition at line 193 of file itkSegmentationLevelSetImageFilter.h.
double itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetMaximumPropagationTimeStep | ( | ) | const [inline] |
Definition at line 465 of file itkSegmentationLevelSetImageFilter.h.
virtual const char* itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetNameOfClass | ( | ) | const [virtual] |
Run-time type information (and related methods).
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
ValueType itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetPropagationScaling | ( | ) | const [inline] |
Definition at line 345 of file itkSegmentationLevelSetImageFilter.h.
virtual bool itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetReverseExpansionDirection | ( | ) | const [virtual] |
Turn On/Off the flag which determines whether Positive or Negative speed terms will cause surface expansion. If set to TRUE then negative speed terms will cause the surface to expand and positive speed terms will cause the surface to contract. If set to FALSE (default) then positive speed terms will cause the surface to expand and negative speed terms will cause the surface to contract. This method can be safely used to reverse the expansion/contraction as appropriate to a particular application or data set.
virtual SegmentationFunctionType* itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetSegmentationFunction | ( | ) | [inline, virtual] |
Definition at line 429 of file itkSegmentationLevelSetImageFilter.h.
virtual const SpeedImageType* itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetSpeedImage | ( | ) | const [inline, virtual] |
Return a pointer to the image sampled as the speed term of the segmentation algorithm.
Definition at line 238 of file itkSegmentationLevelSetImageFilter.h.
bool itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetUseMinimalCurvature | ( | ) | const [inline] |
Definition at line 397 of file itkSegmentationLevelSetImageFilter.h.
bool itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetUseNegativeFeatures | ( | ) | const [inline] |
Definition at line 280 of file itkSegmentationLevelSetImageFilter.h.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::InitializeIteration | ( | ) | [inline, protected, virtual] |
Overrides parent implementation
Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
Definition at line 494 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::operator= | ( | const Self & | ) | [private] |
Flag to indicate whether Speed and Advection images are automatically generated when running the filter. Otherwise, a pointer to images must be explicitly set or GenerateSpeedImage() and/or GenerateAdvectionImage() called directly before updating the filter
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::PrintSelf | ( | std::ostream & | os, |
Indent | indent | ||
) | const [protected, virtual] |
End concept checking
Reimplemented from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >.
Reimplemented in itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, itk::ShapeDetectionLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::LaplacianSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ReverseExpansionDirectionOff | ( | ) | [virtual] |
Turn On/Off the flag which determines whether Positive or Negative speed terms will cause surface expansion. If set to TRUE then negative speed terms will cause the surface to expand and positive speed terms will cause the surface to contract. If set to FALSE (default) then positive speed terms will cause the surface to expand and negative speed terms will cause the surface to contract. This method can be safely used to reverse the expansion/contraction as appropriate to a particular application or data set.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ReverseExpansionDirectionOn | ( | ) | [virtual] |
Turn On/Off the flag which determines whether Positive or Negative speed terms will cause surface expansion. If set to TRUE then negative speed terms will cause the surface to expand and positive speed terms will cause the surface to contract. If set to FALSE (default) then positive speed terms will cause the surface to expand and negative speed terms will cause the surface to contract. This method can be safely used to reverse the expansion/contraction as appropriate to a particular application or data set.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetAdvectionImage | ( | VectorImageType * | v | ) | [inline] |
This function is for advanced applications. Set the image sampled as the advection term of this segmentation method. In general, the advection image is generated automatically by a subclass of this filter.
Definition at line 233 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetAdvectionScaling | ( | ValueType | v | ) | [inline] |
Set/Get the scaling of the advection field. Setting the FeatureScaling parameter will override any existing value for AdvectionScaling.
Definition at line 352 of file itkSegmentationLevelSetImageFilter.h.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetAutoGenerateSpeedAdvection | ( | bool | _arg | ) | [virtual] |
Turn On/Off automatic generation of Speed and Advection terms when Update is called. If set to Off, the Speed and Advection images must be set explicitly using SetSpeedImage, SetAdvectionImage OR the methods GenerateSpeedImage() and GenerateAdvectionImage() should be called prior to updating the filter.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetCurvatureScaling | ( | ValueType | v | ) | [inline] |
Set/Get the scaling of the curvature. Use this parameter to increase the influence of curvature on the movement of the surface. Higher values relative to Advection and Propagation values will give smoother surfaces.
Definition at line 371 of file itkSegmentationLevelSetImageFilter.h.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetFeatureImage | ( | const FeatureImageType * | f | ) | [inline, virtual] |
Set/Get the feature image to be used for speed function of the level set equation. Equivalent to calling Set/GetInput(1, ..)
Definition at line 201 of file itkSegmentationLevelSetImageFilter.h.
References itk::ProcessObject::SetNthInput().
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetFeatureScaling | ( | ValueType | v | ) | [inline] |
Combined scaling of the propagation and advection speed terms. You should use either this -or- Get/SetPropagationScaling and Get/SetAdvectionScaling (if appropriate). See subclasses for details on when and whether to set these parameters.
Definition at line 320 of file itkSegmentationLevelSetImageFilter.h.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetInitialImage | ( | InputImageType * | f | ) | [inline, virtual] |
Set/Get the initial level set model. Equivalent to calling SetInput(..)
Definition at line 213 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetInput2 | ( | const FeatureImageType * | input | ) | [inline] |
Set the feature image
Definition at line 219 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetMaximumCurvatureTimeStep | ( | double | n | ) | [inline] |
Set/Get the maximum constraint for the curvature term factor in the time step calculation. Changing this value from the default is not recommended or necessary but could be used to speed up the surface evolution at the risk of creating an unstable solution.
Definition at line 436 of file itkSegmentationLevelSetImageFilter.h.
References itk::LevelSetFunction< TImageType >::SetMaximumCurvatureTimeStep().
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetMaximumIterations | ( | unsigned int | i | ) | [inline] |
Set/Get the maximum number of iterations allowed for the solver. This prevents infinite loops if a solution "bounces".
Definition at line 186 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetMaximumPropagationTimeStep | ( | double | n | ) | [inline] |
Set/Get the maximum constraint for the scalar/vector term factor of the time step calculation. Changing this value from the default is not recommended or necessary but could be used to speed up the surface evolution at the risk of creating an unstable solution.
Definition at line 455 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetPropagationScaling | ( | ValueType | v | ) | [inline] |
Set/Get the scaling of the propagation speed. Setting the FeatureScaling parameter overrides any previous values set for PropagationScaling.
Definition at line 335 of file itkSegmentationLevelSetImageFilter.h.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetReverseExpansionDirection | ( | bool | _arg | ) | [virtual] |
Turn On/Off the flag which determines whether Positive or Negative speed terms will cause surface expansion. If set to TRUE then negative speed terms will cause the surface to expand and positive speed terms will cause the surface to contract. If set to FALSE (default) then positive speed terms will cause the surface to expand and negative speed terms will cause the surface to contract. This method can be safely used to reverse the expansion/contraction as appropriate to a particular application or data set.
virtual void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSegmentationFunction | ( | SegmentationFunctionType * | s | ) | [inline, virtual] |
Set the segmentation function. In general, this should only be called by a subclass of this object. It is made public to allow itk::Command objects access. The method is inline to avoid a problem with the gcc 2.95 compiler matching the declaration with the definition.
Definition at line 417 of file itkSegmentationLevelSetImageFilter.h.
References itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >::Initialize().
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSpeedImage | ( | SpeedImageType * | s | ) | [inline] |
This function is for advanced applications. Set the image sampled as the speed term of this segmentation method. In general, the speed image is generated automatically by a subclass of this filter.
Definition at line 227 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUseMinimalCurvature | ( | bool | b | ) | [inline] |
Definition at line 387 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUseNegativeFeatures | ( | bool | u | ) | [inline] |
THIS METHOD IS DEPRECATED AND SHOULD NOT BE USED. Set/Get the value of the UseNegativeFeatures flag. This method is deprecated. Use Set/Get ReverseExpansionDirection instead.
Definition at line 266 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUseNegativeFeaturesOff | ( | ) | [inline] |
Definition at line 257 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUseNegativeFeaturesOn | ( | ) | [inline] |
THIS METHOD IS DEPRECATED AND SHOULD NOT BE USED. This method reverses the speed function direction, effectively changing inside feature values to outside feature values and vice versa.
Definition at line 249 of file itkSegmentationLevelSetImageFilter.h.
itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::typedef | ( | Concept::HasNumericTraits< TOutputPixelType > | ) |
Begin concept checking This class requires OutputHasNumericTraitsCheck in the form of ( Concept::HasNumericTraits< TOutputPixelType > )
Reimplemented in itk::CannySegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >, and itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::UseMinimalCurvatureOff | ( | ) | [inline] |
Definition at line 407 of file itkSegmentationLevelSetImageFilter.h.
void itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::UseMinimalCurvatureOn | ( | ) | [inline] |
Definition at line 402 of file itkSegmentationLevelSetImageFilter.h.
bool itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::m_AutoGenerateSpeedAdvection [protected] |
Flag to indicate whether Speed and Advection images are automatically generated when running the filter. Otherwise, a pointer to images must be explicitly set or GenerateSpeedImage() and/or GenerateAdvectionImage() called directly before updating the filter
Definition at line 515 of file itkSegmentationLevelSetImageFilter.h.
bool itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::m_ReverseExpansionDirection [protected] |
Flag which sets the inward/outward direction of propagation speed. See SetReverseExpansionDirection for more information.
Definition at line 509 of file itkSegmentationLevelSetImageFilter.h.
SegmentationFunctionType* itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::m_SegmentationFunction [private] |
Definition at line 521 of file itkSegmentationLevelSetImageFilter.h.