#include <itkPatchBasedDenoisingBaseImageFilter.h>

Inheritance diagram for itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >:

Collaboration diagram for itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >:

Detailed Description

template<typename TInputImage, typename TOutputImage>
class itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >

Base class for patch-based denoising algorithms.

Implementation of a denoising filter that uses iterative non-local, or semi-local, weighted averaging of image patches for image denoising. The intensity at each pixel 'p' gets updated as a weighted average of intensities of a chosen subset of pixels from the image. The weights are derived using a kernel function on distances between (i) the patch around pixel p and (ii) the patches around the chosen subset of pixels in the image. This class of methods is motivated by texture-based image models and relies on nonparametric statistical modeling in the high-dimensional space of image patches. The choice of an appropriate kernel bandwidth parameter underlying nonparametric modeling can be important and may be estimated using cross-validation schemes.

Engineering issues underlying this class of methods include the choice of the patch size, the definition of a weighting mask on patches (e.g. to make patches more isotropic and less rectangular), the number of iterations over the image, the scheme for sampling patches from the image, and the weights balancing the regularization and data fidelity when the noise model is known.

This class of methods stems from the following two independent and simultaneous publications:

Suyash P. Awate, Ross T. Whitaker. Higher-Order Image Statistics for Unsupervised, Information-Theoretic, Adaptive, Image Filtering. IEEE Int. Conf. Computer Vision and Pattern Recognition (CVPR) 2005; (2):44-51.

Antoni Buades, Bartomeu Coll, Jean-Michel Morel. A Non-Local Algorithm for Image Denoising. IEEE Int. Conf. Computer Vision and Pattern Recognition (CVPR) 2005; (2):60-65.

While the former work considers the denoising algorithm as performing entropy reduction using nonparametric density estimation, the latter work treats it as nonparametric regression. Details underlying this class of methods appear in:

Suyash P. Awate, Ross T. Whitaker. Unsupervised, Information-Theoretic, Adaptive Image Filtering for Image Restoration. IEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI) 2006; 28(3):364-376.

Antoni Buades, Bartomeu Coll, Jean-Michel Morel. Nonlocal Image and Movie Denoising. International Journal of Computer Vision (IJCV) 2008; 76(2):123-139.

This class provides the base software framework for implementing patch-based denoising methods for multi-dimensional and multi-channel (i.e. vector-valued pixels) images. This framework is multithreaded on shared-memory architectures. Multithreading is incorporated in, both, intensity-updates and bandwidth-estimation stages by subdividing the image domain and associating each sub-domain to a single thread for processing.

To prevent oversmoothing, this class provides the framework for including a data-fidelity term based on the knowledge of the noise model. The intensity updates are then treated as the sum of (1) the weighted smoothing updates (weighted by SmoothingWeight) and (2) the weighted fidelity updates (weighted by NoiseModelFidelityWeight) that prevent large deviations of the denoised image from the noisy data.

See Also: PatchBasedDenoisingImageFilter

Definition at line 94 of file itkPatchBasedDenoisingBaseImageFilter.h.

Public Types
typedef ZeroFluxNeumannBoundaryCondition < OutputImageType >	BoundaryConditionType

enum	ComponentSpaceType { EUCLIDEAN = 0, RIEMANNIAN = 1 }

typedef SmartPointer< const Self >	ConstPointer

enum	FilterStateType { UNINITIALIZED = 0, INITIALIZED = 1 }

typedef ConstNeighborhoodIterator < InputImageType, BoundaryConditionType >	InputImagePatchIterator

typedef TInputImage	InputImageType

typedef InputImageType::PixelType	InputPixelType

typedef typename::itk::Statistics::ImageToNeighborhoodSampleAdaptor < OutputImageType, BoundaryConditionType >	ListAdaptorType

enum	NoiseModelType { NOMODEL = 0, GAUSSIAN = 1, RICIAN = 2, POISSON = 3 }

typedef TOutputImage	OutputImageType

typedef OutputImageType::PixelType	OutputPixelType

typedef ListAdaptorType::NeighborhoodRadiusType	PatchRadiusType

typedef Array< float >	PatchWeightsType

typedef OutputPixelType	PixelType

typedef NumericTraits < PixelType >::ValueType	PixelValueType

typedef SmartPointer< Self >	Pointer

typedef PatchBasedDenoisingBaseImageFilter	Self

typedef ImageToImageFilter < TInputImage, TOutputImage >	Superclass

Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
typedef SmartPointer< const Self >	ConstPointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef InputImageType::PixelType	InputImagePixelType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::RegionType	InputImageRegionType

typedef TInputImage	InputImageType

typedef Superclass::OutputImagePixelType	OutputImagePixelType

typedef Superclass::OutputImageRegionType	OutputImageRegionType

typedef SmartPointer< Self >	Pointer

typedef ImageToImageFilter	Self

typedef ImageSource< TOutputImage >	Superclass

Public Types inherited from itk::ImageSource< TOutputImage >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType

typedef DataObject::Pointer	DataObjectPointer

typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType

typedef OutputImageType::PixelType	OutputImagePixelType

typedef OutputImageType::Pointer	OutputImagePointer

typedef OutputImageType::RegionType	OutputImageRegionType

typedef TOutputImage	OutputImageType

typedef SmartPointer< Self >	Pointer

typedef ImageSource	Self

typedef ProcessObject	Superclass

Public Types inherited from itk::ProcessObject
typedef SmartPointer< const Self >	ConstPointer

typedef DataObject::DataObjectIdentifierType	DataObjectIdentifierType

typedef DataObject::Pointer	DataObjectPointer

typedef std::vector < DataObjectPointer >	DataObjectPointerArray

typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType

typedef MultiThreader	MultiThreaderType

typedef std::vector < DataObjectIdentifierType >	NameArray

typedef SmartPointer< Self >	Pointer

typedef ProcessObject	Self

typedef Object	Superclass

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual const unsigned int &	GetElapsedIterations () const

virtual const char *	GetNameOfClass () const

PatchRadiusType	GetPatchDiameterInVoxels () const

PatchRadiusType::SizeValueType	GetPatchLengthInVoxels () const

PatchRadiusType	GetPatchRadiusInVoxels () const

PatchWeightsType	GetPatchWeights () const

void	SetPatchWeights (const PatchWeightsType &weights)

virtual void	SetStateToInitialized ()

virtual void	SetStateToUninitialized ()


virtual void	SetPatchRadius (unsigned int _arg)

virtual unsigned int	GetPatchRadius () const


virtual void	SetNoiseModel (NoiseModelType _arg)

virtual NoiseModelType	GetNoiseModel () const


virtual void	SetSmoothingWeight (double _arg)

virtual double	GetSmoothingWeight () const


virtual void	SetNoiseModelFidelityWeight (double _arg)

virtual double	GetNoiseModelFidelityWeight () const


virtual void	SetKernelBandwidthEstimation (bool _arg)

virtual void	KernelBandwidthEstimationOn ()

virtual void	KernelBandwidthEstimationOff ()

virtual bool	GetKernelBandwidthEstimation () const


virtual void	SetKernelBandwidthUpdateFrequency (unsigned int _arg)

virtual unsigned int	GetKernelBandwidthUpdateFrequency () const


virtual void	SetNumberOfIterations (unsigned int _arg)

virtual const unsigned int &	GetNumberOfIterations () const


virtual void	SetAlwaysTreatComponentsAsEuclidean (bool _arg)

virtual void	AlwaysTreatComponentsAsEuclideanOn ()

virtual void	AlwaysTreatComponentsAsEuclideanOff ()

virtual bool	GetAlwaysTreatComponentsAsEuclidean () const


virtual void	SetState (FilterStateType _arg)

virtual const FilterStateType &	GetState () const


virtual void	SetManualReinitialization (bool _arg)

virtual const bool &	GetManualReinitialization () const

virtual void	ManualReinitializationOn ()

virtual void	ManualReinitializationOff ()

Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType *	GetInput () const

const InputImageType *	GetInput (unsigned int idx) const

virtual void	PopBackInput () override

virtual void	PopFrontInput () override

virtual void	PushBackInput (const InputImageType *image)

virtual void	PushFrontInput (const InputImageType *image)

virtual void	SetInput (const InputImageType *image)

virtual void	SetInput (unsigned int, const TInputImage *image)

virtual void	SetCoordinateTolerance (double _arg)

virtual double	GetCoordinateTolerance () const

virtual void	SetDirectionTolerance (double _arg)

virtual double	GetDirectionTolerance () const

Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput (unsigned int idx)

virtual void	GraftNthOutput (unsigned int idx, DataObject *output)

virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)

OutputImageType *	GetOutput ()

const OutputImageType *	GetOutput () const

virtual void	GraftOutput (DataObject *output)

virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override

virtual ProcessObject::DataObjectPointer	MakeOutput (const ProcessObject::DataObjectIdentifierType &) override

Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()

virtual void	AbortGenerateDataOn ()

virtual void	EnlargeOutputRequestedRegion (DataObject *)

virtual const bool &	GetAbortGenerateData () const

DataObjectPointerArray	GetIndexedInputs ()

DataObjectPointerArray	GetIndexedOutputs ()

NameArray	GetInputNames () const

DataObjectPointerArray	GetInputs ()

MultiThreaderType *	GetMultiThreader () const

DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const

DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const

DataObjectPointerArraySizeType	GetNumberOfInputs () const

DataObjectPointerArraySizeType	GetNumberOfOutputs () const

virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const

NameArray	GetOutputNames () const

DataObjectPointerArray	GetOutputs ()

virtual const float &	GetProgress () const

NameArray	GetRequiredInputNames () const

bool	HasInput (const DataObjectIdentifierType &key) const

bool	HasOutput (const DataObjectIdentifierType &key) const

virtual void	PrepareOutputs ()

virtual void	PropagateRequestedRegion (DataObject *output)

virtual void	ResetPipeline ()

virtual void	SetAbortGenerateData (bool _arg)

virtual void	Update ()

virtual void	UpdateLargestPossibleRegion ()

virtual void	UpdateOutputData (DataObject *output)

virtual void	UpdateOutputInformation ()

void	UpdateProgress (float progress)

void	SetProgress (float progress)

virtual void	SetReleaseDataFlag (bool flag)

virtual bool	GetReleaseDataFlag () const

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual const bool &	GetReleaseDataBeforeUpdateFlag () const

virtual void	ReleaseDataBeforeUpdateFlagOn ()

virtual void	ReleaseDataBeforeUpdateFlagOff ()

virtual void	SetNumberOfThreads (ThreadIdType _arg)

virtual const ThreadIdType &	GetNumberOfThreads () const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual LightObject::Pointer	CreateAnother () const override

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) override

virtual void	UnRegister () const noexceptoverride

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Static Public Attributes
static const unsigned int	ImageDimension = InputImageType::ImageDimension

Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static const unsigned int	InputImageDimension = TInputImage::ImageDimension

static const unsigned int	OutputImageDimension = TOutputImage::ImageDimension

Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static const unsigned int	OutputImageDimension = TOutputImage::ImageDimension

Protected Member Functions
virtual void	AllocateUpdateBuffer ()=0

virtual void	ApplyUpdate ()=0

virtual void	ComputeImageUpdate ()=0

virtual void	ComputeKernelBandwidthUpdate ()=0

virtual void	CopyInputToOutput ()=0

ComponentSpaceType	DetermineComponentSpace (const RGBPixel< PixelValueType > &)

ComponentSpaceType	DetermineComponentSpace (const RGBAPixel< PixelValueType > &)

ComponentSpaceType	DetermineComponentSpace (const DiffusionTensor3D< PixelValueType > &)

template<typename PixelT >
ComponentSpaceType	DetermineComponentSpace (const PixelT &)

virtual void	GenerateData () override

virtual void	GenerateInputRequestedRegion () override

virtual bool	Halt ()

virtual void	Initialize ()

virtual void	InitializeIteration ()

virtual void	InitializePatchWeights ()

	PatchBasedDenoisingBaseImageFilter ()

virtual void	PostProcessOutput ()

virtual void	PreProcessInput ()

virtual void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetElapsedIterations (unsigned int _arg)

virtual bool	ThreadedHalt (void *)

	~PatchBasedDenoisingBaseImageFilter () override


virtual void	SetComponentSpace (ComponentSpaceType _arg)

virtual ComponentSpaceType	GetComponentSpace () const

Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)

virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)

	ImageToImageFilter ()

virtual void	VerifyInputInformation () override

	~ImageToImageFilter () override

void	PushBackInput (const DataObject *input) override

void	PushFrontInput (const DataObject *input) override

Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void	AfterThreadedGenerateData ()

virtual void	AllocateOutputs ()

virtual void	BeforeThreadedGenerateData ()

virtual const ImageRegionSplitterBase *	GetImageRegionSplitter () const

	ImageSource ()

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)

virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)

virtual	~ImageSource () override

Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)

void	AddOptionalInputName (const DataObjectIdentifierType &)

void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

virtual void	AddOutput (DataObject *output)

bool	AddRequiredInputName (const DataObjectIdentifierType &)

bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

virtual void	CacheInputReleaseDataFlags ()

virtual void	GenerateOutputInformation ()

virtual void	GenerateOutputRequestedRegion (DataObject *output)

DataObject *	GetInput (const DataObjectIdentifierType &key)

const DataObject *	GetInput (const DataObjectIdentifierType &key) const

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const

bool	IsIndexedInputName (const DataObjectIdentifierType &) const

bool	IsIndexedOutputName (const DataObjectIdentifierType &) const

bool	IsRequiredInputName (const DataObjectIdentifierType &) const

	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))

	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))

	itkLegacyMacro (virtual void RemoveInput(DataObject *input))

	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))

DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const

DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const

DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const

DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const

	ProcessObject ()

virtual void	PropagateResetPipeline ()

virtual void	ReleaseInputs ()

virtual void	RemoveInput (const DataObjectIdentifierType &key)

virtual void	RemoveInput (DataObjectPointerArraySizeType)

virtual void	RemoveOutput (const DataObjectIdentifierType &key)

virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)

bool	RemoveRequiredInputName (const DataObjectIdentifierType &)

virtual void	RestoreInputReleaseDataFlags ()

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)

virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)

void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)

void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)

virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)

virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)

virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)

virtual void	SetPrimaryInput (DataObject *input)

virtual void	SetPrimaryOutput (DataObject *output)

void	SetRequiredInputNames (const NameArray &)

virtual void	VerifyPreconditions ()

	~ProcessObject () override

DataObject *	GetInput (DataObjectPointerArraySizeType idx)

const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const

DataObject *	GetPrimaryInput ()

const DataObject *	GetPrimaryInput () const

virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryInputName (void) const

DataObject *	GetOutput (const DataObjectIdentifierType &key)

const DataObject *	GetOutput (const DataObjectIdentifierType &key) const

virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryOutputName (void) const

DataObject *	GetOutput (DataObjectPointerArraySizeType idx)

const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const

DataObject *	GetPrimaryOutput ()

const DataObject *	GetPrimaryOutput () const

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Protected Attributes
const InputImageType *	m_InputImage

OutputImageType *	m_OutputImage

Protected Attributes inherited from itk::ProcessObject
TimeStamp	m_OutputInformationMTime

bool	m_Updating

Protected Attributes inherited from itk::LightObject
AtomicInt< int >	m_ReferenceCount

Private Attributes
bool	m_AlwaysTreatComponentsAsEuclidean

ComponentSpaceType	m_ComponentSpace

unsigned int	m_ElapsedIterations

bool	m_KernelBandwidthEstimation

unsigned int	m_KernelBandwidthUpdateFrequency

bool	m_ManualReinitialization

NoiseModelType	m_NoiseModel

double	m_NoiseModelFidelityWeight

unsigned int	m_NumberOfIterations

unsigned int	m_PatchRadius

PatchWeightsType	m_PatchWeights

double	m_SmoothingWeight

FilterStateType	m_State

Additional Inherited Members
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension) >	InputToOutputRegionCopierType

typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension) >	OutputToInputRegionCopierType

Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBase *	GetGlobalDefaultSplitter ()

static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)

Member Typedef Documentation

template<typename TInputImage , typename TOutputImage >

typedef ZeroFluxNeumannBoundaryCondition<OutputImageType> itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::BoundaryConditionType

This data structure type is used for efficiently accessing patch values from the image data structure.

Definition at line 143 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef SmartPointer<const Self> itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ConstPointer

Definition at line 102 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef ConstNeighborhoodIterator< InputImageType, BoundaryConditionType > itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::InputImagePatchIterator

Definition at line 148 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef TInputImage itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::InputImageType

Input and output image types.

Definition at line 105 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef InputImageType::PixelType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::InputPixelType

Type definition for the input and output pixel types. Output pixel type will be used in computations.

Definition at line 118 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef typename::itk::Statistics::ImageToNeighborhoodSampleAdaptor< OutputImageType, BoundaryConditionType > itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ListAdaptorType

Definition at line 145 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef TOutputImage itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::OutputImageType

Definition at line 109 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef OutputImageType::PixelType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::OutputPixelType

Definition at line 119 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef ListAdaptorType::NeighborhoodRadiusType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PatchRadiusType

Definition at line 146 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef Array<float> itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PatchWeightsType

This data structure type is used to store the weights (mask) for pixels in a patch in order to make the patch more isotropic and less rectangular.

Definition at line 138 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef OutputPixelType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PixelType

Definition at line 120 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef NumericTraits<PixelType>::ValueType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PixelValueType

Definition at line 121 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef SmartPointer<Self> itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::Pointer

Definition at line 101 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef PatchBasedDenoisingBaseImageFilter itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::Self

Standard class typedefs.

Definition at line 99 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

typedef ImageToImageFilter<TInputImage, TOutputImage> itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::Superclass

Definition at line 100 of file itkPatchBasedDenoisingBaseImageFilter.h.

Member Enumeration Documentation

template<typename TInputImage , typename TOutputImage >

enum itk::PatchBasedDenoisingBaseImageFilter::ComponentSpaceType

Type definition to determine which space to do calculations in. TODO add comment about why no noise model can be used for RIEMANNIAN space

Enumerator
EUCLIDEAN
RIEMANNIAN

Definition at line 130 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

enum itk::PatchBasedDenoisingBaseImageFilter::FilterStateType

State that the filter is in, i.e. UNINITIALIZED or INITIALIZED.

Enumerator
UNINITIALIZED
INITIALIZED

Definition at line 133 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

enum itk::PatchBasedDenoisingBaseImageFilter::NoiseModelType

Type definition for selecting the noise model.

Enumerator
NOMODEL
GAUSSIAN
RICIAN
POISSON

Definition at line 124 of file itkPatchBasedDenoisingBaseImageFilter.h.

Constructor & Destructor Documentation

template<typename TInputImage , typename TOutputImage >

itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PatchBasedDenoisingBaseImageFilter ( )

protected

template<typename TInputImage , typename TOutputImage >

itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::~PatchBasedDenoisingBaseImageFilter ( )

overrideprotected

Member Function Documentation

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::AllocateUpdateBuffer ( )

protectedpure virtual

Allocate memory for a temporary update container in the subclass.

Implemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::AlwaysTreatComponentsAsEuclideanOff ( )

virtual

Set/Get flag indicating whether all components should always be treated as if they are in euclidean space regardless of pixel type. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::AlwaysTreatComponentsAsEuclideanOn ( )

virtual

Set/Get flag indicating whether all components should always be treated as if they are in euclidean space regardless of pixel type. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ApplyUpdate ( )

protectedpure virtual

Implemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ComputeImageUpdate ( )

protectedpure virtual

Perform one iteration of image denoising.

Implemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ComputeKernelBandwidthUpdate ( )

protectedpure virtual

Automatically estimate kernel bandwidth from the image data.

Implemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::CopyInputToOutput ( )

protectedpure virtual

Implemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

ComponentSpaceType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::DetermineComponentSpace ( const RGBPixel< PixelValueType > & )

inlineprotected

Determine the component space based on pixel type

Definition at line 305 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

ComponentSpaceType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::DetermineComponentSpace ( const RGBAPixel< PixelValueType > & )

inlineprotected

Definition at line 310 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

ComponentSpaceType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::DetermineComponentSpace ( const DiffusionTensor3D< PixelValueType > & )

inlineprotected

Definition at line 315 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

template<typename PixelT >

ComponentSpaceType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::DetermineComponentSpace ( const PixelT & )

inlineprotected

Definition at line 321 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GenerateData ( )

overrideprotectedvirtual

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See Also: ThreadedGenerateData()

Reimplemented from itk::ImageSource< TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GenerateInputRequestedRegion ( )

overrideprotectedvirtual

What is the input requested region that is required to produce the output requested region? The base assumption for image processing filters is that the input requested region can be set to match the output requested region. If a filter requires more input (for instance a filter that uses neighborhoods needs more input than output to avoid introducing artificial boundary conditions) or less input (for instance a magnify filter) will have to override this method. In doing so, it should call its superclass' implementation as its first step. Note that imaging filters operate differently than the classes to this point in the class hierarchy. Up till now, the base assumption has been that the largest possible region will be requested of the input.

This implementation of GenerateInputRequestedRegion() only processes the inputs that are a subclass of the ImageBase<InputImageDimension>. If an input is another type of DataObject (including an Image of a different dimension), they are skipped by this method. The subclasses of ImageToImageFilter are responsible for providing an implementation of GenerateInputRequestedRegion() when there are multiple inputs of different types.

See Also: ProcessObject::GenerateInputRequestedRegion(), ImageSource::GenerateInputRequestedRegion()

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetAlwaysTreatComponentsAsEuclidean ( ) const

virtual

Set/Get flag indicating whether all components should always be treated as if they are in euclidean space regardless of pixel type. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual ComponentSpaceType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetComponentSpace ( ) const

protectedvirtual

Set/Get the component space type.

template<typename TInputImage , typename TOutputImage >

virtual const unsigned int& itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetElapsedIterations ( ) const

virtual

Get the number of elapsed iterations of the filter.

template<typename TInputImage , typename TOutputImage >

virtual bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetKernelBandwidthEstimation ( ) const

virtual

Set/Get flag indicating whether kernel-bandwidth should be estimated automatically from the image data. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetKernelBandwidthUpdateFrequency ( ) const

virtual

Set/Get the update frequency for the kernel bandwidth estimation. An optimal bandwidth will be re-estimated based on the denoised image after every 'n' iterations. Must be a positive integer. Defaults to 3, i.e. bandwidth updated after every 3 denoising iteration.

template<typename TInputImage , typename TOutputImage >

virtual const bool& itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetManualReinitialization ( ) const

virtual

Indicates whether the filter automatically resets to UNINITIALIZED state after completing, or whether filter must be manually reset. Require the filter to be manually reinitialized (by calling SetStateToUninitialized().

template<typename TInputImage , typename TOutputImage >

virtual const char* itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual NoiseModelType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetNoiseModel ( ) const

virtual

Set/Get the noise model type. Defaults to NOMODEL. To use the noise model during denoising, NoiseModelFidelityWeight must be positive.

template<typename TInputImage , typename TOutputImage >

virtual double itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetNoiseModelFidelityWeight ( ) const

virtual

Set/Get the weight on the fidelity term (penalizes deviations from the noisy data). This option is used when a noise model is specified. This weight controls the balance between the smoothing and the closeness to the noisy data. Use a positive weight to prevent oversmoothing.

template<typename TInputImage , typename TOutputImage >

virtual const unsigned int& itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetNumberOfIterations ( ) const

virtual

Set/Get the number of denoising iterations to perform. Must be a positive integer. Defaults to 1.

template<typename TInputImage , typename TOutputImage >

PatchRadiusType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetPatchDiameterInVoxels ( ) const

template<typename TInputImage , typename TOutputImage >

PatchRadiusType::SizeValueType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetPatchLengthInVoxels ( ) const

template<typename TInputImage , typename TOutputImage >

virtual unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetPatchRadius ( ) const

virtual

Set/Get the patch radius specified in physical coordinates. Patch radius is preferably set to an even number. Currently, only isotropic patches in physical space are allowed; patches can be anisotropic in voxel space.

template<typename TInputImage , typename TOutputImage >

PatchRadiusType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetPatchRadiusInVoxels ( ) const

template<typename TInputImage , typename TOutputImage >

PatchWeightsType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetPatchWeights ( ) const

template<typename TInputImage , typename TOutputImage >

virtual double itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetSmoothingWeight ( ) const

virtual

Set/Get the weight on the smoothing term. This option is used when a noise model is specified. This weight controls the balance between the smoothing and the closeness to the noisy data. Large stepsizes may cause instabilities.

template<typename TInputImage , typename TOutputImage >

virtual const FilterStateType& itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::GetState ( ) const

virtual

Set/Get the state of the filter.

template<typename TInputImage , typename TOutputImage >

virtual bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::Halt ( )

protectedvirtual

Check and indicate whether to continue iterations or stop.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::Initialize ( void )

inlineprotectedvirtual

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

Definition at line 275 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::InitializeIteration ( )

inlineprotectedvirtual

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

Definition at line 282 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::InitializePatchWeights ( )

protectedvirtual

Allocate memory and initialize patch weights.

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::KernelBandwidthEstimationOff ( )

virtual

Set/Get flag indicating whether kernel-bandwidth should be estimated automatically from the image data. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::KernelBandwidthEstimationOn ( )

virtual

Set/Get flag indicating whether kernel-bandwidth should be estimated automatically from the image data. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ManualReinitializationOff ( )

virtual

Indicates whether the filter automatically resets to UNINITIALIZED state after completing, or whether filter must be manually reset. Require the filter to be manually reinitialized (by calling SetStateToUninitialized().

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ManualReinitializationOn ( )

virtual

Indicates whether the filter automatically resets to UNINITIALIZED state after completing, or whether filter must be manually reset. Require the filter to be manually reinitialized (by calling SetStateToUninitialized().

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PostProcessOutput ( )

inlineprotectedvirtual

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

Definition at line 292 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PreProcessInput ( )

inlineprotectedvirtual

Definition at line 280 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::PatchBasedDenoisingImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetAlwaysTreatComponentsAsEuclidean ( bool _arg )

virtual

Set/Get flag indicating whether all components should always be treated as if they are in euclidean space regardless of pixel type. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetComponentSpace ( ComponentSpaceType _arg )

protectedvirtual

Set/Get the component space type.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetElapsedIterations ( unsigned int _arg )

protectedvirtual

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetKernelBandwidthEstimation ( bool _arg )

virtual

Set/Get flag indicating whether kernel-bandwidth should be estimated automatically from the image data. Defaults to false.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetKernelBandwidthUpdateFrequency ( unsigned int _arg )

virtual

Set/Get the update frequency for the kernel bandwidth estimation. An optimal bandwidth will be re-estimated based on the denoised image after every 'n' iterations. Must be a positive integer. Defaults to 3, i.e. bandwidth updated after every 3 denoising iteration.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetManualReinitialization ( bool _arg )

virtual

Indicates whether the filter automatically resets to UNINITIALIZED state after completing, or whether filter must be manually reset. Require the filter to be manually reinitialized (by calling SetStateToUninitialized().

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetNoiseModel ( NoiseModelType _arg )

virtual

Set/Get the noise model type. Defaults to NOMODEL. To use the noise model during denoising, NoiseModelFidelityWeight must be positive.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetNoiseModelFidelityWeight ( double _arg )

virtual

Set/Get the weight on the fidelity term (penalizes deviations from the noisy data). This option is used when a noise model is specified. This weight controls the balance between the smoothing and the closeness to the noisy data. Use a positive weight to prevent oversmoothing.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetNumberOfIterations ( unsigned int _arg )

virtual

Set/Get the number of denoising iterations to perform. Must be a positive integer. Defaults to 1.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetPatchRadius ( unsigned int _arg )

virtual

Set/Get the patch radius specified in physical coordinates. Patch radius is preferably set to an even number. Currently, only isotropic patches in physical space are allowed; patches can be anisotropic in voxel space.

template<typename TInputImage , typename TOutputImage >

void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetPatchWeights ( const PatchWeightsType & weights )

Set/Get the patch weights, or mask, that make the patch more isotropic (less rectangular). This function allows the user to set arbitrary patch weights by providing a 1-D array of weights.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetSmoothingWeight ( double _arg )

virtual

Set/Get the weight on the smoothing term. This option is used when a noise model is specified. This weight controls the balance between the smoothing and the closeness to the noisy data. Large stepsizes may cause instabilities.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetState ( FilterStateType _arg )

virtual

Set/Get the state of the filter.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetStateToInitialized ( )

virtual

Set the state of the filter to INITIALIZED.

template<typename TInputImage , typename TOutputImage >

virtual void itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::SetStateToUninitialized ( )

virtual

Set the state of the filter to UNINITIALIZED.

template<typename TInputImage , typename TOutputImage >

virtual bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ThreadedHalt ( void * )

inlineprotectedvirtual

Definition at line 297 of file itkPatchBasedDenoisingBaseImageFilter.h.

Member Data Documentation

template<typename TInputImage , typename TOutputImage >

const unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::ImageDimension = InputImageType::ImageDimension

static

Image dimension, assumed to be the same for input and output data.

Definition at line 113 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_AlwaysTreatComponentsAsEuclidean

private

Parameter indicating whether components should be treated as if they are in Euclidean space regardless of pixel type.

Definition at line 359 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

ComponentSpaceType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_ComponentSpace

private

Definition at line 360 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_ElapsedIterations

private

Definition at line 350 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

const InputImageType* itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_InputImage

protected

Definition at line 328 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_KernelBandwidthEstimation

private

Parameters that define the strategy for kernel-bandwidth estimation.

Definition at line 344 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_KernelBandwidthUpdateFrequency

private

Definition at line 345 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

bool itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_ManualReinitialization

private

Definition at line 362 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

NoiseModelType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_NoiseModel

private

Parameters defining the usage of a specific noise model, if desired.

Definition at line 353 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

double itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_NoiseModelFidelityWeight

private

Definition at line 355 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_NumberOfIterations

private

Parameters that define the total number of denoising iterations to perform and those completed so far.

Definition at line 349 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

OutputImageType* itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_OutputImage

protected

Definition at line 334 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

unsigned int itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_PatchRadius

private

Parameters that define patch size and patch weights (mask).

Definition at line 337 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

PatchWeightsType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_PatchWeights

private

Definition at line 341 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

double itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_SmoothingWeight

private

Definition at line 354 of file itkPatchBasedDenoisingBaseImageFilter.h.

template<typename TInputImage , typename TOutputImage >

FilterStateType itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >::m_State

private

Definition at line 364 of file itkPatchBasedDenoisingBaseImageFilter.h.

The documentation for this class was generated from the following file:

itkPatchBasedDenoisingBaseImageFilter.h

Detailed Description

template<typename TInputImage, typename TOutputImage> class itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >

Public Types

Public Member Functions

Static Public Attributes

Protected Member Functions

Protected Attributes

Private Attributes

Additional Inherited Members

Member Typedef Documentation

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename TInputImage, typename TOutputImage>
class itk::PatchBasedDenoisingBaseImageFilter< TInputImage, TOutputImage >