ITK  4.13.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Types | Private Member Functions | Private Attributes | List of all members
itk::SinglePhaseLevelSetSegmentationModule< NDimension > Class Template Reference
Module LesionSizingToolkit

#include <itkSinglePhaseLevelSetSegmentationModule.h>

+ Inheritance diagram for itk::SinglePhaseLevelSetSegmentationModule< NDimension >:
+ Collaboration diagram for itk::SinglePhaseLevelSetSegmentationModule< NDimension >:

Detailed Description

template<unsigned int NDimension>
class itk::SinglePhaseLevelSetSegmentationModule< NDimension >

Class applies a single-phase level set segmentation method.

SpatialObjects are used as inputs and outputs of this class.

Definition at line 35 of file itkSinglePhaseLevelSetSegmentationModule.h.

Public Types

typedef SmartPointer< const Self > ConstPointer
 
typedef Image
< FeaturePixelType, NDimension > 		FeatureImageType
 
typedef float FeaturePixelType
 
typedef ImageSpatialObject
< NDimension, FeaturePixelType > 		FeatureSpatialObjectType
 
typedef Image< InputPixelType,
NDimension > 		InputImageType
 
typedef float InputPixelType
 
typedef ImageSpatialObject
< NDimension, InputPixelType > 		InputSpatialObjectType
 
typedef Image< OutputPixelType,
NDimension > 		OutputImageType
 
typedef float OutputPixelType
 
typedef ImageSpatialObject
< NDimension, OutputPixelType > 		OutputSpatialObjectType
 
typedef SmartPointer< Self > Pointer
 
typedef
SinglePhaseLevelSetSegmentationModule 		Self
 
typedef
Superclass::SpatialObjectPointer 		SpatialObjectPointer
 
typedef
Superclass::SpatialObjectType 		SpatialObjectType
 
typedef SegmentationModule
< NDimension > 		Superclass
 
- Public Types inherited from itk::SegmentationModule< NDimension >
typedef SmartPointer< const Self > ConstPointer
 
typedef SmartPointer< Self > Pointer
 
typedef SegmentationModule Self
 
typedef SpatialObjectType::Pointer SpatialObjectPointer
 
typedef SpatialObject< NDimension > SpatialObjectType
 
typedef ProcessObject Superclass
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const Self > ConstPointer
 
typedef
DataObject::DataObjectIdentifierType 		DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer > 		DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 		DataObjectPointerArraySizeType
 
typedef MultiThreader MultiThreaderType
 
typedef std::vector
< DataObjectIdentifierType > 		NameArray
 
typedef SmartPointer< Self > Pointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const Self > ConstPointer
 
typedef SmartPointer< Self > Pointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const Self > ConstPointer
 
typedef SmartPointer< Self > Pointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual const char * GetNameOfClass () const
 
virtual void SetPropagationScaling (double _arg)
 
virtual double GetPropagationScaling ()
 
virtual void SetCurvatureScaling (double _arg)
 
virtual double GetCurvatureScaling ()
 
virtual void SetAdvectionScaling (double _arg)
 
virtual double GetAdvectionScaling ()
 
virtual void SetMaximumRMSError (double _arg)
 
virtual double GetMaximumRMSError ()
 
virtual void SetMaximumNumberOfIterations (unsigned int _arg)
 
virtual unsigned int GetMaximumNumberOfIterations ()
 
virtual void SetInvertOutputIntensities (bool _arg)
 
virtual bool GetInvertOutputIntensities ()
 
virtual void InvertOutputIntensitiesOn ()
 
virtual void InvertOutputIntensitiesOff ()
 
- Public Member Functions inherited from itk::SegmentationModule< NDimension >
unsigned int GetExpectedNumberOfFeatures () const
 
const SpatialObjectType * GetOutput () const
 
void SetInput (const SpatialObjectType *input)
 
const SpatialObjectType * GetInput () const
 
void SetFeature (const SpatialObjectType *feature)
 
const SpatialObjectType * GetFeature () const
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderType * GetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 		GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (DataObjectPointerArraySizeType idx)
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
void SetProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdType & GetNumberOfThreads () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
Command * GetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionary & GetMetaDataDictionary ()
 
const MetaDataDictionary & GetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStamp & GetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) override
 
virtual void UnRegister () const noexceptoverride
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::SegmentationModule< NDimension >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static const unsigned int Dimension = NDimension
 
- Static Public Attributes inherited from itk::SegmentationModule< NDimension >
static const unsigned int Dimension = NDimension
 

Protected Member Functions

void GenerateData ()
 
const FeatureImageType * GetInternalFeatureImage () const
 
const InputImageType * GetInternalInputImage () const
 
void PackOutputImageInOutputSpatialObject (OutputImageType *outputImage)
 
void PrintSelf (std::ostream &os, Indent indent) const
 
 SinglePhaseLevelSetSegmentationModule ()
 
virtual ~SinglePhaseLevelSetSegmentationModule ()
 
- Protected Member Functions inherited from itk::SegmentationModule< NDimension >
SpatialObjectType * GetInternalOutput ()
 
 SegmentationModule ()
 
virtual ~SegmentationModule ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObject * GetInput (const DataObjectIdentifierType &key)
 
const DataObject * GetInput (const DataObjectIdentifierType &key) const
 
virtual const
DataObjectPointerArraySizeType & 		GetNumberOfRequiredInputs () const
 
virtual const
DataObjectPointerArraySizeType & 		GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
virtual void PopBackInput ()
 
virtual void PopFrontInput ()
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PushFrontInput (const DataObject *input)
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyInputInformation ()
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject () override
 
DataObject * GetInput (DataObjectPointerArraySizeType idx)
 
const DataObject * GetInput (DataObjectPointerArraySizeType idx) const
 
DataObject * GetPrimaryInput ()
 
const DataObject * GetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName (void) const
 
DataObject * GetOutput (const DataObjectIdentifierType &key)
 
const DataObject * GetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName (void) const
 
DataObject * GetOutput (DataObjectPointerArraySizeType idx)
 
const DataObject * GetOutput (DataObjectPointerArraySizeType idx) const
 
DataObject * GetPrimaryOutput ()
 
const DataObject * GetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Types

typedef
InputImageType::ConstPointer 		ImageConstPointer
 

Private Member Functions

void operator= (const Self &)
 
 SinglePhaseLevelSetSegmentationModule (const Self &)
 

Private Attributes

double m_AdvectionScaling
 
double m_CurvatureScaling
 
bool m_InvertOutputIntensities
 
unsigned int m_MaximumNumberOfIterations
 
double m_MaximumRMSError
 
double m_PropagationScaling
 
ImageConstPointer m_ZeroSetInputImage
 

Additional Inherited Members

- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
AtomicInt< int > m_ReferenceCount
 

Member Typedef Documentation

template<unsigned int NDimension>
typedef SmartPointer<const Self> itk::SinglePhaseLevelSetSegmentationModule< NDimension >::ConstPointer

Definition at line 42 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef Image< FeaturePixelType, NDimension > itk::SinglePhaseLevelSetSegmentationModule< NDimension >::FeatureImageType

Definition at line 63 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef float itk::SinglePhaseLevelSetSegmentationModule< NDimension >::FeaturePixelType

Definition at line 60 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef ImageSpatialObject< NDimension, FeaturePixelType > itk::SinglePhaseLevelSetSegmentationModule< NDimension >::FeatureSpatialObjectType

Definition at line 68 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef InputImageType::ConstPointer itk::SinglePhaseLevelSetSegmentationModule< NDimension >::ImageConstPointer
private

Definition at line 143 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef Image< InputPixelType, NDimension > itk::SinglePhaseLevelSetSegmentationModule< NDimension >::InputImageType

Definition at line 62 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef float itk::SinglePhaseLevelSetSegmentationModule< NDimension >::InputPixelType

Types of the input, feature and output images.

Definition at line 59 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef ImageSpatialObject< NDimension, InputPixelType > itk::SinglePhaseLevelSetSegmentationModule< NDimension >::InputSpatialObjectType

Types of the Spatial objects used for input, feature and output images.

Definition at line 67 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef Image< OutputPixelType, NDimension > itk::SinglePhaseLevelSetSegmentationModule< NDimension >::OutputImageType

Definition at line 64 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef float itk::SinglePhaseLevelSetSegmentationModule< NDimension >::OutputPixelType

Definition at line 61 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef ImageSpatialObject< NDimension, OutputPixelType > itk::SinglePhaseLevelSetSegmentationModule< NDimension >::OutputSpatialObjectType

Definition at line 69 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef SmartPointer<Self> itk::SinglePhaseLevelSetSegmentationModule< NDimension >::Pointer

Definition at line 41 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef SinglePhaseLevelSetSegmentationModule itk::SinglePhaseLevelSetSegmentationModule< NDimension >::Self

Standard class typedefs.

Definition at line 39 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef Superclass::SpatialObjectPointer itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SpatialObjectPointer

Definition at line 56 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef Superclass::SpatialObjectType itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SpatialObjectType

Type of spatialObject that will be passed as input and output of this segmentation method.

Definition at line 55 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
typedef SegmentationModule<NDimension> itk::SinglePhaseLevelSetSegmentationModule< NDimension >::Superclass

Definition at line 40 of file itkSinglePhaseLevelSetSegmentationModule.h.

Constructor & Destructor Documentation

template<unsigned int NDimension>
itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SinglePhaseLevelSetSegmentationModule ( )
protected
template<unsigned int NDimension>
virtual itk::SinglePhaseLevelSetSegmentationModule< NDimension >::~SinglePhaseLevelSetSegmentationModule ( )
protectedvirtual
template<unsigned int NDimension>
itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SinglePhaseLevelSetSegmentationModule ( const Self &  )
private

Member Function Documentation

template<unsigned int NDimension>
virtual::itk::LightObject::Pointer itk::SinglePhaseLevelSetSegmentationModule< NDimension >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::SegmentationModule< NDimension >.

template<unsigned int NDimension>
void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GenerateData ( )
protectedvirtual

Method invoked by the pipeline in order to trigger the computation of the segmentation.

Reimplemented from itk::ProcessObject.

template<unsigned int NDimension>
virtual double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetAdvectionScaling ( )
virtual

Weight that controls the behavior of the level set.

template<unsigned int NDimension>
virtual double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetCurvatureScaling ( )
virtual

Weight that controls the behavior of curvature restriction in the level set.

template<unsigned int NDimension>
const FeatureImageType* itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetInternalFeatureImage ( ) const
protected

Extract the input feature image from the input feature spatial object.

template<unsigned int NDimension>
const InputImageType* itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetInternalInputImage ( ) const
protected

Extract the input image from the input spatial object.

template<unsigned int NDimension>
virtual bool itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetInvertOutputIntensities ( )
virtual

Invert the output image. This is a convenience method intended to make uniform the convention that segmentations are encoded with positive values in the pixels inside of the segmented object and negative values in the pixels outside of the segmented object. This is opposed to the general convention of ITK level sets, where the values inside the object are negative, and for this reason they must be inverted here. By default the intensities must be inverted, and therefore, by default this variable will be set to true. However, when combining multiple level sets in a sequence, this variable should be set to false.

template<unsigned int NDimension>
virtual unsigned int itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetMaximumNumberOfIterations ( )
virtual

Maximum number of iterations that the level set solve will run.

template<unsigned int NDimension>
virtual double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetMaximumRMSError ( )
virtual

Value of RMS change under which the level set propagation will stop.

template<unsigned int NDimension>
virtual const char* itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::SegmentationModule< NDimension >.

Reimplemented in itk::FastMarchingAndGeodesicActiveContourLevelSetSegmentationModule< NDimension >, itk::FastMarchingAndShapeDetectionLevelSetSegmentationModule< NDimension >, itk::FastMarchingSegmentationModule< NDimension >, itk::GeodesicActiveContourLevelSetSegmentationModule< NDimension >, and itk::ShapeDetectionLevelSetSegmentationModule< NDimension >.

template<unsigned int NDimension>
virtual double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::GetPropagationScaling ( )
virtual

Weight that controls the propagating behavior of the level set.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::InvertOutputIntensitiesOff ( )
virtual

Invert the output image. This is a convenience method intended to make uniform the convention that segmentations are encoded with positive values in the pixels inside of the segmented object and negative values in the pixels outside of the segmented object. This is opposed to the general convention of ITK level sets, where the values inside the object are negative, and for this reason they must be inverted here. By default the intensities must be inverted, and therefore, by default this variable will be set to true. However, when combining multiple level sets in a sequence, this variable should be set to false.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::InvertOutputIntensitiesOn ( )
virtual

Invert the output image. This is a convenience method intended to make uniform the convention that segmentations are encoded with positive values in the pixels inside of the segmented object and negative values in the pixels outside of the segmented object. This is opposed to the general convention of ITK level sets, where the values inside the object are negative, and for this reason they must be inverted here. By default the intensities must be inverted, and therefore, by default this variable will be set to true. However, when combining multiple level sets in a sequence, this variable should be set to false.

template<unsigned int NDimension>
static Pointer itk::SinglePhaseLevelSetSegmentationModule< NDimension >::New ( )
static

Method for creation through the object factory.

template<unsigned int NDimension>
void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::operator= ( const Self &  )
private
template<unsigned int NDimension>
void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::PackOutputImageInOutputSpatialObject ( OutputImageType *  outputImage)
protected

Set the output image as cargo of the output SpatialObject.

template<unsigned int NDimension>
void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::SegmentationModule< NDimension >.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SetAdvectionScaling ( double  _arg)
virtual

Weight that controls the behavior of the level set.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SetCurvatureScaling ( double  _arg)
virtual

Weight that controls the behavior of curvature restriction in the level set.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SetInvertOutputIntensities ( bool  _arg)
virtual

Invert the output image. This is a convenience method intended to make uniform the convention that segmentations are encoded with positive values in the pixels inside of the segmented object and negative values in the pixels outside of the segmented object. This is opposed to the general convention of ITK level sets, where the values inside the object are negative, and for this reason they must be inverted here. By default the intensities must be inverted, and therefore, by default this variable will be set to true. However, when combining multiple level sets in a sequence, this variable should be set to false.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SetMaximumNumberOfIterations ( unsigned int  _arg)
virtual

Maximum number of iterations that the level set solve will run.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SetMaximumRMSError ( double  _arg)
virtual

Value of RMS change under which the level set propagation will stop.

template<unsigned int NDimension>
virtual void itk::SinglePhaseLevelSetSegmentationModule< NDimension >::SetPropagationScaling ( double  _arg)
virtual

Weight that controls the propagating behavior of the level set.

Member Data Documentation

template<unsigned int NDimension>
const unsigned int itk::SinglePhaseLevelSetSegmentationModule< NDimension >::Dimension = NDimension
static

Dimension of the space

Definition at line 51 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_AdvectionScaling
private

Definition at line 136 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_CurvatureScaling
private

Definition at line 135 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
bool itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_InvertOutputIntensities
private

Definition at line 141 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
unsigned int itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_MaximumNumberOfIterations
private

Definition at line 138 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_MaximumRMSError
private

Definition at line 139 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
double itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_PropagationScaling
private

Definition at line 134 of file itkSinglePhaseLevelSetSegmentationModule.h.

template<unsigned int NDimension>
ImageConstPointer itk::SinglePhaseLevelSetSegmentationModule< NDimension >::m_ZeroSetInputImage
mutableprivate

Definition at line 144 of file itkSinglePhaseLevelSetSegmentationModule.h.

The documentation for this class was generated from the following file:
Tarballs of the nightly generated Doxygen documentation are available for the html, xml, and tag file.
Generated on Tue Dec 19 2017 05:54:58 for ITK by   doxygen 1.8.5