itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField > Class Template Reference

#include <itkVariationalRegistrationFunction.h>

Inheritance diagram for itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >:

Collaboration diagram for itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >:

Detailed Description

template<class TFixedImage, class TMovingImage, class TDisplacementField>
class itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >

Base class for force calculation in the variational registration framework.

This class is templated over fixed image type, moving image type and deformation field type. This function has the fixed image, the moving image and the current displacement field as input and computes an update value in ComputeUpdate().

Implement a concrete force type in a subclass; overwrite the methods InitializeIteration() and ComputeUpdate().

See Also

VariationalRegistrationFilter

Note

This class was developed with funding from the German Research Foundation (DFG: EH 224/3-1 and HA 235/9-1).

Author

Alexander Schmidt-Richberg

Rene Werner

Jan Ehrhardt

Definition at line 50 of file itkVariationalRegistrationFunction.h.

Classes
struct	GlobalDataStruct

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef TDisplacementField	DisplacementFieldType
typedef DisplacementFieldType::ConstPointer	DisplacementFieldTypePointer
typedef FixedImageType::ConstPointer	FixedImagePointer
typedef TFixedImage	FixedImageType
typedef unsigned char	MaskImagePixelType
typedef MaskImageType::ConstPointer	MaskImagePointer
typedef Image < MaskImagePixelType, ImageDimension >	MaskImageType
typedef MovingImageType::ConstPointer	MovingImagePointer
typedef TMovingImage	MovingImageType
typedef MovingImageWarperType::Pointer	MovingImageWarperPointer
typedef itk::ContinuousBorderWarpImageFilter < FixedImageType, WarpedImageType, DisplacementFieldType >	MovingImageWarperType
typedef SmartPointer< Self >	Pointer
typedef VariationalRegistrationFunction	Self
typedef FiniteDifferenceFunction < TDisplacementField >	Superclass
typedef Superclass::TimeStepType	TimeStepType
typedef WarpedImageType::ConstPointer	WarpedImagePointer
typedef TFixedImage	WarpedImageType
Public Types inherited from itk::FiniteDifferenceFunction< TDisplacementField >
typedef SmartPointer< const Self >	ConstPointer
typedef ZeroFluxNeumannBoundaryCondition < ImageType >	DefaultBoundaryConditionType
typedef Vector< float, itkGetStaticConstMacro(ImageDimension) >	FloatOffsetType
typedef TDisplacementField	ImageType
typedef Vector< PixelRealType, itkGetStaticConstMacro(ImageDimension) >	NeighborhoodScalesType
typedef ConstNeighborhoodIterator < TDisplacementField, DefaultBoundaryConditionType >	NeighborhoodType
typedef double	PixelRealType
typedef ImageType::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef ConstNeighborhoodIterator < TDisplacementField > ::RadiusType	RadiusType
typedef FiniteDifferenceFunction	Self
typedef LightObject	Superclass
typedef double	TimeStepType
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual TimeStepType	ComputeGlobalTimeStep (void *) const override
virtual const DisplacementFieldType *	GetDisplacementField (void) const
virtual const FixedImageType *	GetFixedImage (void) const
virtual void *	GetGlobalDataPointer () const override
virtual MaskImagePixelType	GetMaskBackgroundThreshold (void) const
virtual const MaskImageType *	GetMaskImage (void) const
virtual double	GetMetric () const
virtual const MovingImageType *	GetMovingImage (void) const
virtual const MovingImageWarperType *	GetMovingImageWarper (void) const
virtual const char *	GetNameOfClass () const
virtual double	GetRMSChange () const
virtual const TimeStepType	GetTimeStep (void) const
virtual void	InitializeIteration () override
virtual void	ReleaseGlobalDataPointer (void *GlobalData) const override
virtual void	SetDisplacementField (DisplacementFieldType *ptr)
virtual void	SetFixedImage (const FixedImageType *ptr)
virtual void	SetMaskBackgroundThreshold (MaskImagePixelType threshold)
virtual void	SetMaskImage (const MaskImageType *ptr)
virtual void	SetMovingImage (const MovingImageType *ptr)
virtual void	SetMovingImageWarper (MovingImageWarperType *ptr)
virtual void	SetTimeStep (TimeStepType timeStep)
Public Member Functions inherited from itk::FiniteDifferenceFunction< TDisplacementField >
const NeighborhoodScalesType	ComputeNeighborhoodScales () const
virtual PixelType	ComputeUpdate (const NeighborhoodType &neighborhood, void *globalData, const FloatOffsetType &offset=FloatOffsetType(0.0))=0
const RadiusType &	GetRadius () const
void	GetScaleCoefficients (PixelRealType vals[ImageDimension]) const
void	SetRadius (const RadiusType &r)
void	SetScaleCoefficients (PixelRealType vals[ImageDimension])
Public Member Functions inherited from itk::LightObject
virtual Pointer	CreateAnother () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const noexcept

Static Public Attributes
static const unsigned int	ImageDimension = Superclass::ImageDimension
Static Public Attributes inherited from itk::FiniteDifferenceFunction< TDisplacementField >
static const unsigned int	ImageDimension

Protected Member Functions
virtual const WarpedImagePointer	GetWarpedImage (void) const
virtual void	PrintSelf (std::ostream &os, Indent indent) const override
	VariationalRegistrationFunction ()
virtual void	WarpMovingImage (void)
	~VariationalRegistrationFunction ()
Protected Member Functions inherited from itk::FiniteDifferenceFunction< TDisplacementField >
	FiniteDifferenceFunction ()
	~FiniteDifferenceFunction () override
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
void	operator= (const Self &)
	VariationalRegistrationFunction (const Self &)

Private Attributes
DisplacementFieldTypePointer	m_DisplacementField
FixedImagePointer	m_FixedImage
MaskImagePixelType	m_MaskBackgroundThreshold
MaskImagePointer	m_MaskImage
double	m_Metric
SimpleFastMutexLock	m_MetricCalculationLock
MovingImagePointer	m_MovingImage
MovingImageWarperPointer	m_MovingImageWarper
SizeValueType	m_NumberOfPixelsProcessed
double	m_RMSChange
double	m_SumOfMetricValues
double	m_SumOfSquaredChange
TimeStepType	m_TimeStep

Additional Inherited Members
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()
Protected Attributes inherited from itk::FiniteDifferenceFunction< TDisplacementField >
RadiusType	m_Radius
PixelRealType	m_ScaleCoefficients [ImageDimension]
Protected Attributes inherited from itk::LightObject
AtomicInt< int >	m_ReferenceCount

Member Typedef Documentation

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef SmartPointer< const Self > itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer

Definition at line 58 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef TDisplacementField itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType

Deformation field type.

Definition at line 81 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef DisplacementFieldType::ConstPointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldTypePointer

Definition at line 82 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef FixedImageType::ConstPointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer

Definition at line 74 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef TFixedImage itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType

FixedImage image type.

Definition at line 73 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef unsigned char itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MaskImagePixelType

MovingImage image type.

Definition at line 85 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef MaskImageType::ConstPointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MaskImagePointer

Definition at line 87 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef Image< MaskImagePixelType, ImageDimension > itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MaskImageType

Definition at line 86 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef MovingImageType::ConstPointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer

Definition at line 70 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef TMovingImage itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType

MovingImage image type.

Definition at line 69 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef MovingImageWarperType::Pointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageWarperPointer

Definition at line 94 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef itk::ContinuousBorderWarpImageFilter< FixedImageType, WarpedImageType, DisplacementFieldType > itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::MovingImageWarperType

Typedef of the warp image filter.

Definition at line 93 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef SmartPointer< Self > itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Pointer

Definition at line 57 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef VariationalRegistrationFunction itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Self

Standard class typedefs.

Definition at line 55 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef FiniteDifferenceFunction< TDisplacementField > itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::Superclass

Definition at line 56 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef Superclass::TimeStepType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::TimeStepType

Definition at line 60 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef WarpedImageType::ConstPointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::WarpedImagePointer

Definition at line 78 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

typedef TFixedImage itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::WarpedImageType

FixedImage image type.

Definition at line 77 of file itkVariationalRegistrationFunction.h.

Constructor & Destructor Documentation

template<class TFixedImage , class TMovingImage , class TDisplacementField >

itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::VariationalRegistrationFunction ( )

protected

template<class TFixedImage , class TMovingImage , class TDisplacementField >

itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::~VariationalRegistrationFunction ( )

inlineprotected

Definition at line 185 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::VariationalRegistrationFunction ( const Self &  )

private

Member Function Documentation

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual TimeStepType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeGlobalTimeStep ( void *  ) const

inlineoverridevirtual

Computes the time step for an update. Returns the constant time step.

See Also

SetTimeStep()

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

Reimplemented in itk::VariationalRegistrationSSDFunction< TFixedImage, TMovingImage, TDisplacementField >, and itk::VariationalRegistrationNCCFunction< TFixedImage, TMovingImage, TDisplacementField >.

Definition at line 161 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_TimeStep.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const DisplacementFieldType* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetDisplacementField ( void  ) const

inlinevirtual

Get the deformation field.

Definition at line 118 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_DisplacementField.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const FixedImageType* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetFixedImage ( void  ) const

inlinevirtual

Get the fixed image.

Definition at line 110 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_FixedImage.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetGlobalDataPointer ( ) const

overridevirtual

Return a pointer to a global data structure that is passed to this object from the solver at each calculation.

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

Reimplemented in itk::VariationalRegistrationFastNCCFunction< TFixedImage, TMovingImage, TDisplacementField >.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual MaskImagePixelType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMaskBackgroundThreshold ( void  ) const

inlinevirtual

Get the MaskBackgroundThreshold. All Pixels of the mask image will be treated as background if the are <= this threshold.

Definition at line 152 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MaskBackgroundThreshold.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const MaskImageType* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMaskImage ( void  ) const

inlinevirtual

Get the mask image.

Definition at line 126 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MaskImage.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual double itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMetric ( ) const

inlinevirtual

Get the metric value. The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images.

Definition at line 176 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_Metric.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const MovingImageType* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImage ( void  ) const

inlinevirtual

Get the Moving image.

Definition at line 102 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImage.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const MovingImageWarperType* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImageWarper ( void  ) const

inlinevirtual

Get the moving image warper.

Definition at line 134 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageWarper.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const char* itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods)

Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.

Reimplemented in itk::VariationalRegistrationFastNCCFunction< TFixedImage, TMovingImage, TDisplacementField >, itk::VariationalRegistrationNCCFunction< TFixedImage, TMovingImage, TDisplacementField >, itk::VariationalRegistrationDemonsFunction< TFixedImage, TMovingImage, TDisplacementField >, and itk::VariationalRegistrationSSDFunction< TFixedImage, TMovingImage, TDisplacementField >.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual double itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetRMSChange ( ) const

inlinevirtual

Get the rms change in deformation field.

Definition at line 180 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_RMSChange.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const TimeStepType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetTimeStep ( void  ) const

inlinevirtual

Get the time step.

Definition at line 142 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_TimeStep.

Referenced by itk::VariationalRegistrationNCCFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeGlobalTimeStep(), and itk::VariationalRegistrationSSDFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeGlobalTimeStep().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual const WarpedImagePointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetWarpedImage ( void  ) const

protectedvirtual

Get the warped image.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )

overridevirtual

Set the object's state before each iteration.

Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.

Reimplemented in itk::VariationalRegistrationNCCFunction< TFixedImage, TMovingImage, TDisplacementField >, itk::VariationalRegistrationDemonsFunction< TFixedImage, TMovingImage, TDisplacementField >, and itk::VariationalRegistrationSSDFunction< TFixedImage, TMovingImage, TDisplacementField >.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::operator= ( const Self &  )

private

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

overrideprotectedvirtual

Print information about the filter.

Reimplemented from itk::FiniteDifferenceFunction< TDisplacementField >.

Reimplemented in itk::VariationalRegistrationSSDFunction< TFixedImage, TMovingImage, TDisplacementField >, itk::VariationalRegistrationDemonsFunction< TFixedImage, TMovingImage, TDisplacementField >, itk::VariationalRegistrationNCCFunction< TFixedImage, TMovingImage, TDisplacementField >, and itk::VariationalRegistrationFastNCCFunction< TFixedImage, TMovingImage, TDisplacementField >.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ReleaseGlobalDataPointer ( void *  GlobalData ) const

overridevirtual

Release memory for global data structure.

Implements itk::FiniteDifferenceFunction< TDisplacementField >.

Reimplemented in itk::VariationalRegistrationFastNCCFunction< TFixedImage, TMovingImage, TDisplacementField >.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetDisplacementField ( DisplacementFieldType *  ptr )

inlinevirtual

Set the deformation field.

Definition at line 114 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_DisplacementField.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetFixedImage ( const FixedImageType *  ptr )

inlinevirtual

Set the fixed image.

Definition at line 106 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_FixedImage.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMaskBackgroundThreshold ( MaskImagePixelType  threshold )

inlinevirtual

Set the MaskBackgroundThreshold. All Pixels of the mask image will be treated as background if the are <= this threshold.

Definition at line 147 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MaskBackgroundThreshold.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMaskImage ( const MaskImageType *  ptr )

inlinevirtual

Set the mask image.

Definition at line 122 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MaskImage.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImage ( const MovingImageType *  ptr )

inlinevirtual

Set the Moving image.

Definition at line 98 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImage.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImageWarper ( MovingImageWarperType *  ptr )

inlinevirtual

Set the moving image warper.

Definition at line 130 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageWarper.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetTimeStep ( TimeStepType  timeStep )

inlinevirtual

Set the time step. This time step will be used by ComputeGlobalTimeStep().

Definition at line 138 of file itkVariationalRegistrationFunction.h.

References itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_TimeStep.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

virtual void itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::WarpMovingImage ( void  )

protectedvirtual

Warp the moving image into the domain of the fixed image using the deformation field.

Member Data Documentation

template<class TFixedImage , class TMovingImage , class TDisplacementField >

const unsigned int itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ImageDimension = Superclass::ImageDimension

static

Get image dimension.

Definition at line 66 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

DisplacementFieldTypePointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_DisplacementField

private

The deformation field.

Definition at line 217 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetDisplacementField(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetDisplacementField().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

FixedImagePointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_FixedImage

private

The fixed image.

Definition at line 214 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetFixedImage(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetFixedImage().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

MaskImagePixelType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MaskBackgroundThreshold

private

Threshold to define the background in the mask image.

Definition at line 229 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMaskBackgroundThreshold(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMaskBackgroundThreshold().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

MaskImagePointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MaskImage

private

The deformation field.

Definition at line 220 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMaskImage(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMaskImage().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

double itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_Metric

mutableprivate

The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images.

Definition at line 234 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMetric().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

SimpleFastMutexLock itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MetricCalculationLock

mutableprivate

Mutex lock to protect modification to metric.

Definition at line 241 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

MovingImagePointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImage

private

The Moving image.

Definition at line 211 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImage(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImage().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

MovingImageWarperPointer itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_MovingImageWarper

private

A class to warp the moving image into the domain of the fixed image.

Definition at line 223 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetMovingImageWarper(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetMovingImageWarper().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

SizeValueType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_NumberOfPixelsProcessed

mutableprivate

Definition at line 236 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

double itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_RMSChange

mutableprivate

Definition at line 237 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetRMSChange().

template<class TFixedImage , class TMovingImage , class TDisplacementField >

double itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_SumOfMetricValues

mutableprivate

Definition at line 235 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

double itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_SumOfSquaredChange

mutableprivate

Definition at line 238 of file itkVariationalRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDisplacementField >

TimeStepType itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::m_TimeStep

private

The global timestep.

Definition at line 226 of file itkVariationalRegistrationFunction.h.

Referenced by itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::ComputeGlobalTimeStep(), itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::GetTimeStep(), and itk::VariationalRegistrationFunction< TFixedImage, TMovingImage, TDisplacementField >::SetTimeStep().

---

The documentation for this class was generated from the following file:

• itkVariationalRegistrationFunction.h