ITK  4.13.0
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itk::VelocityFieldTransform< TParametersValueType, NDimensions > Class Template Reference

#include <itkVelocityFieldTransform.h>

+ Inheritance diagram for itk::VelocityFieldTransform< TParametersValueType, NDimensions >:
+ Collaboration diagram for itk::VelocityFieldTransform< TParametersValueType, NDimensions >:

Detailed Description

template<typename TParametersValueType, unsigned int NDimensions>
class itk::VelocityFieldTransform< TParametersValueType, NDimensions >

Provides local/dense/high-dimensionality transformation via a a velocity field.

Author
Nick Tustison
Brian Avants

Definition at line 36 of file itkVelocityFieldTransform.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::DerivativeType DerivativeType
 
typedef
VelocityFieldType::DirectionType 
DirectionType
 
typedef
DisplacementFieldType::Pointer 
DisplacementFieldPointer
 
typedef
Superclass::DisplacementFieldType 
DisplacementFieldType
 
typedef
Superclass::FixedParametersType 
FixedParametersType
 
typedef
Superclass::FixedParametersValueType 
FixedParametersValueType
 
typedef
VelocityFieldType::IndexType 
IndexType
 
typedef Superclass::InputPointType InputPointType
 
typedef
Superclass::InputVectorPixelType 
InputVectorPixelType
 
typedef Superclass::InputVectorType InputVectorType
 
typedef
Superclass::InverseTransformBasePointer 
InverseTransformBasePointer
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef
ImageVectorOptimizerParametersHelper
< ScalarType, Dimension,
VelocityFieldDimension
OptimizerParametersHelperType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef
Superclass::OutputVectorPixelType 
OutputVectorPixelType
 
typedef
Superclass::OutputVectorType 
OutputVectorType
 
typedef Superclass::ParametersType ParametersType
 
typedef
Superclass::ParametersValueType 
ParametersValueType
 
typedef
VelocityFieldType::PixelType 
PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
VelocityFieldType::PointType 
PointType
 
typedef
VelocityFieldType::RegionType 
RegionType
 
typedef Superclass::ScalarType ScalarType
 
typedef VelocityFieldTransform Self
 
typedef VelocityFieldType::SizeType SizeType
 
typedef
VelocityFieldType::SpacingType 
SpacingType
 
typedef
DisplacementFieldTransform
< TParametersValueType,
NDimensions > 
Superclass
 
typedef
Superclass::TransformCategoryType 
TransformCategoryType
 
typedef
VelocityFieldInterpolatorType::Pointer 
VelocityFieldInterpolatorPointer
 
typedef
VectorInterpolateImageFunction
< VelocityFieldType,
ScalarType
VelocityFieldInterpolatorType
 
typedef VelocityFieldType::Pointer VelocityFieldPointer
 
typedef Image
< OutputVectorType,
VelocityFieldDimension
VelocityFieldType
 
- Public Types inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
typedef SmartPointer< const SelfConstPointer
 
typedef Superclass::DerivativeType DerivativeType
 
typedef
DisplacementFieldType::DirectionType 
DirectionType
 
typedef
DisplacementFieldType::ConstPointer 
DisplacementFieldConstPointer
 
typedef
DisplacementFieldType::Pointer 
DisplacementFieldPointer
 
typedef Image
< OutputVectorType, Dimension
DisplacementFieldType
 
typedef
Superclass::FixedParametersType 
FixedParametersType
 
typedef
Superclass::FixedParametersValueType 
FixedParametersValueType
 
typedef
DisplacementFieldType::IndexType 
IndexType
 
typedef
Superclass::InputCovariantVectorType 
InputCovariantVectorType
 
typedef
Superclass::InputDiffusionTensor3DType 
InputDiffusionTensor3DType
 
typedef Superclass::InputPointType InputPointType
 
typedef CovariantVector
< ScalarType,
InputDiffusionTensor3DType::Dimension > 
InputTensorEigenVectorType
 
typedef
Superclass::InputVectorPixelType 
InputVectorPixelType
 
typedef Superclass::InputVectorType InputVectorType
 
typedef
Superclass::InputVnlVectorType 
InputVnlVectorType
 
typedef
VectorInterpolateImageFunction
< DisplacementFieldType,
ScalarType
InterpolatorType
 
typedef
Superclass::InverseTransformBasePointer 
InverseTransformBasePointer
 
typedef Superclass::JacobianType JacobianType
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef
ImageVectorOptimizerParametersHelper
< ScalarType,
OutputVectorType::Dimension,
Dimension
OptimizerParametersHelperType
 
typedef
Superclass::OutputCovariantVectorType 
OutputCovariantVectorType
 
typedef
Superclass::OutputDiffusionTensor3DType 
OutputDiffusionTensor3DType
 
typedef Superclass::OutputPointType OutputPointType
 
typedef CovariantVector
< ScalarType,
OutputDiffusionTensor3DType::Dimension > 
OutputTensorEigenVectorType
 
typedef
Superclass::OutputVectorPixelType 
OutputVectorPixelType
 
typedef
Superclass::OutputVectorType 
OutputVectorType
 
typedef
Superclass::OutputVnlVectorType 
OutputVnlVectorType
 
typedef Superclass::ParametersType ParametersType
 
typedef
Superclass::ParametersValueType 
ParametersValueType
 
typedef
DisplacementFieldType::PixelType 
PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
DisplacementFieldType::PointType 
PointType
 
typedef
DisplacementFieldType::RegionType 
RegionType
 
typedef Superclass::ScalarType ScalarType
 
typedef DisplacementFieldTransform Self
 
typedef
DisplacementFieldType::SizeType 
SizeType
 
typedef
DisplacementFieldType::SpacingType 
SpacingType
 
typedef Transform
< TParametersValueType,
NDimensions, NDimensions > 
Superclass
 
typedef
Superclass::TransformCategoryType 
TransformCategoryType
 
- Public Types inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
typedef SmartPointer< const SelfConstPointer
 
typedef Array
< ParametersValueType
DerivativeType
 
typedef Matrix< double,
itkGetStaticConstMacro(OutputSpaceDimension),
itkGetStaticConstMacro(InputSpaceDimension)> 
DirectionChangeMatrix
 
typedef
Superclass::FixedParametersType 
FixedParametersType
 
typedef
Superclass::FixedParametersValueType 
FixedParametersValueType
 
typedef CovariantVector
< TParametersValueType,
NInputDimensions > 
InputCovariantVectorType
 
typedef DiffusionTensor3D
< TParametersValueType > 
InputDiffusionTensor3DType
 
typedef Matrix< double,
itkGetStaticConstMacro(InputSpaceDimension),
itkGetStaticConstMacro(InputSpaceDimension)> 
InputDirectionMatrix
 
typedef Point
< TParametersValueType,
NInputDimensions > 
InputPointType
 
typedef
SymmetricSecondRankTensor
< TParametersValueType,
NInputDimensions > 
InputSymmetricSecondRankTensorType
 
typedef VariableLengthVector
< TParametersValueType > 
InputVectorPixelType
 
typedef Vector
< TParametersValueType,
NInputDimensions > 
InputVectorType
 
typedef vnl_vector_fixed
< TParametersValueType,
NInputDimensions > 
InputVnlVectorType
 
typedef
InverseTransformBaseType::Pointer 
InverseTransformBasePointer
 
typedef Transform
< TParametersValueType,
NOutputDimensions,
NInputDimensions > 
InverseTransformBaseType
 
typedef Array2D
< ParametersValueType
JacobianType
 
typedef Matrix
< TParametersValueType,
itkGetStaticConstMacro(OutputSpaceDimension),
itkGetStaticConstMacro(InputSpaceDimension)> 
MatrixType
 
typedef
Superclass::NumberOfParametersType 
NumberOfParametersType
 
typedef CovariantVector
< TParametersValueType,
NOutputDimensions > 
OutputCovariantVectorType
 
typedef DiffusionTensor3D
< TParametersValueType > 
OutputDiffusionTensor3DType
 
typedef Matrix< double,
itkGetStaticConstMacro(OutputSpaceDimension),
itkGetStaticConstMacro(OutputSpaceDimension)> 
OutputDirectionMatrix
 
typedef Point
< TParametersValueType,
NOutputDimensions > 
OutputPointType
 
typedef
SymmetricSecondRankTensor
< TParametersValueType,
NOutputDimensions > 
OutputSymmetricSecondRankTensorType
 
typedef VariableLengthVector
< TParametersValueType > 
OutputVectorPixelType
 
typedef Vector
< TParametersValueType,
NOutputDimensions > 
OutputVectorType
 
typedef vnl_vector_fixed
< TParametersValueType,
NOutputDimensions > 
OutputVnlVectorType
 
typedef Superclass::ParametersType ParametersType
 
typedef
Superclass::ParametersValueType 
ParametersValueType
 
typedef SmartPointer< SelfPointer
 
typedef ParametersValueType ScalarType
 
typedef Transform Self
 
typedef TransformBaseTemplate
< TParametersValueType > 
Superclass
 
typedef
Superclass::TransformCategoryType 
TransformCategoryType
 
- Public Types inherited from itk::TransformBaseTemplate< TParametersValueType >
typedef SmartPointer< const SelfConstPointer
 
typedef OptimizerParameters
< FixedParametersValueType
FixedParametersType
 
typedef double FixedParametersValueType
 
typedef IdentifierType NumberOfParametersType
 
typedef OptimizerParameters
< ParametersValueType
ParametersType
 
typedef TParametersValueType ParametersValueType
 
typedef SmartPointer< SelfPointer
 
typedef TransformBaseTemplate Self
 
typedef Object Superclass
 
enum  TransformCategoryType {
  UnknownTransformCategory =0,
  Linear =1,
  BSpline =2,
  Spline =3,
  DisplacementField =4,
  VelocityField =5
}
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
bool GetInverse (Self *inverse) const
 
virtual InverseTransformBasePointer GetInverseTransform () const override
 
virtual ScalarType GetLowerTimeBound () const
 
virtual const char * GetNameOfClass () const
 
virtual unsigned int GetNumberOfIntegrationSteps () const
 
virtual ScalarType GetUpperTimeBound () const
 
virtual const unsigned long & GetVelocityFieldSetTime () const
 
virtual void IntegrateVelocityField ()
 
virtual void SetFixedParameters (const FixedParametersType &) override
 
virtual void SetLowerTimeBound (ScalarType _arg)
 
virtual void SetNumberOfIntegrationSteps (unsigned int _arg)
 
virtual void SetUpperTimeBound (ScalarType _arg)
 
virtual void UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override
 
virtual void SetVelocityField (VelocityFieldType *)
 
virtual VelocityFieldTypeGetModifiableVelocityField ()
 
virtual const VelocityFieldTypeGetVelocityField () const
 
virtual void SetVelocityFieldInterpolator (VelocityFieldInterpolatorType *)
 
virtual
VelocityFieldInterpolatorType
GetModifiableVelocityFieldInterpolator ()
 
virtual const
VelocityFieldInterpolatorType
GetVelocityFieldInterpolator () const
 
virtual void SetDisplacementField (DisplacementFieldType *displacementField) override
 
- Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
virtual void ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &j) const override
 
virtual void ComputeJacobianWithRespectToParameters (const IndexType &, JacobianType &j) const
 
virtual void ComputeJacobianWithRespectToPosition (const InputPointType &x, JacobianType &j) const override
 
virtual void ComputeJacobianWithRespectToPosition (const IndexType &x, JacobianType &j) const
 
virtual const ModifiedTimeTypeGetDisplacementFieldSetTime () const
 
bool GetInverse (Self *inverse) const
 
virtual void GetInverseJacobianOfForwardFieldWithRespectToPosition (const InputPointType &point, JacobianType &jacobian, bool useSVD=false) const
 
virtual void GetInverseJacobianOfForwardFieldWithRespectToPosition (const IndexType &index, JacobianType &jacobian, bool useSVD=false) const
 
virtual NumberOfParametersType GetNumberOfLocalParameters (void) const override
 
virtual TransformCategoryType GetTransformCategory () const override
 
virtual void SetIdentity ()
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &) const override
 
OutputVectorPixelType TransformDiffusionTensor (const InputVectorPixelType &) const
 
virtual OutputPointType TransformPoint (const InputPointType &thisPoint) const override
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &) const override
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &) const override
 
virtual DisplacementFieldTypeGetModifiableDisplacementField ()
 
virtual const
DisplacementFieldType
GetDisplacementField () const
 
virtual void SetInverseDisplacementField (DisplacementFieldType *inverseDisplacementField)
 
virtual DisplacementFieldTypeGetModifiableInverseDisplacementField ()
 
virtual const
DisplacementFieldType
GetInverseDisplacementField () const
 
virtual void SetInterpolator (InterpolatorType *interpolator)
 
virtual InterpolatorTypeGetModifiableInterpolator ()
 
virtual const InterpolatorTypeGetInterpolator () const
 
virtual void SetInverseInterpolator (InterpolatorType *interpolator)
 
virtual InterpolatorTypeGetModifiableInverseInterpolator ()
 
virtual const InterpolatorTypeGetInverseInterpolator () const
 
virtual OutputVectorType TransformVector (const InputVectorType &) const override
 
OutputDiffusionTensor3DType TransformDiffusionTensor (const InputDiffusionTensor3DType &) const
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const override
 
virtual void SetParameters (const ParametersType &params) override
 
virtual void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &j) const override
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
virtual void ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &jacobian) const
 
virtual void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const =0
 
virtual void ComputeJacobianWithRespectToParametersCachedTemporaries (const InputPointType &p, JacobianType &jacobian, JacobianType &) const
 
virtual void ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianType &) const
 
virtual void CopyInFixedParameters (const FixedParametersValueType *const begin, const FixedParametersValueType *const end) override
 
virtual void CopyInParameters (const ParametersValueType *const begin, const ParametersValueType *const end) override
 
virtual const FixedParametersTypeGetFixedParameters (void) const override
 
unsigned int GetInputSpaceDimension (void) const override
 
bool GetInverse (Self *) const
 
virtual NumberOfParametersType GetNumberOfFixedParameters () const
 
virtual NumberOfParametersType GetNumberOfParameters (void) const override
 
unsigned int GetOutputSpaceDimension (void) const override
 
virtual const ParametersTypeGetParameters (void) const override
 
virtual std::string GetTransformTypeAsString () const override
 
virtual bool IsLinear () const
 
 itkCloneMacro (Self)
 
virtual void SetParametersByValue (const ParametersType &p) override
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const
 
virtual OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &vector, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformCovariantVector (const InputVectorPixelType &vector, const InputPointType &point) const
 
virtual OutputDiffusionTensor3DType TransformDiffusionTensor3D (const InputDiffusionTensor3DType &) const
 
virtual OutputDiffusionTensor3DType TransformDiffusionTensor3D (const InputDiffusionTensor3DType &tensor, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformDiffusionTensor3D (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformDiffusionTensor3D (const InputVectorPixelType &tensor, const InputPointType &point) const
 
virtual OutputPointType TransformPoint (const InputPointType &) const =0
 
virtual
OutputSymmetricSecondRankTensorType 
TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &tensor, const InputPointType &point) const
 
virtual
OutputSymmetricSecondRankTensorType 
TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &) const
 
virtual OutputVectorPixelType TransformSymmetricSecondRankTensor (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformSymmetricSecondRankTensor (const InputVectorPixelType &tensor, const InputPointType &point) const
 
virtual OutputVectorType TransformVector (const InputVectorType &) const
 
virtual OutputVectorType TransformVector (const InputVectorType &vector, const InputPointType &point) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &) const
 
virtual OutputVnlVectorType TransformVector (const InputVnlVectorType &vector, const InputPointType &point) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &) const
 
virtual OutputVectorPixelType TransformVector (const InputVectorPixelType &vector, const InputPointType &point) const
 
virtual void UpdateTransformParameters (const DerivativeType &update, ParametersValueType factor=1.0)
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) override
 
virtual void UnRegister () const noexceptoverride
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static const unsigned int Dimension = NDimensions
 
static const unsigned int VelocityFieldDimension = NDimensions + 1
 
- Static Public Attributes inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
static const unsigned int Dimension = NDimensions
 
- Static Public Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
static const unsigned int InputSpaceDimension
 
static const unsigned int OutputSpaceDimension
 

Protected Member Functions

DisplacementFieldType::Pointer CopyDisplacementField (const DisplacementFieldType *) const
 
virtual LightObject::Pointer InternalClone () const override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 VelocityFieldTransform ()
 
virtual ~VelocityFieldTransform () override
 
- Protected Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
 DisplacementFieldTransform ()
 
virtual ~DisplacementFieldTransform () override
 
- Protected Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
OutputDiffusionTensor3DType PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType, const JacobianType) const
 
 Transform ()
 
 Transform (NumberOfParametersType NumberOfParameters)
 
virtual ~Transform () override
 
- Protected Member Functions inherited from itk::TransformBaseTemplate< TParametersValueType >
 TransformBaseTemplate ()
 
virtual ~TransformBaseTemplate () override
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

ScalarType m_LowerTimeBound
 
unsigned int m_NumberOfIntegrationSteps
 
ScalarType m_UpperTimeBound
 
VelocityFieldPointer m_VelocityField
 
VelocityFieldInterpolatorType::Pointer m_VelocityFieldInterpolator
 
unsigned long m_VelocityFieldSetTime
 
- Protected Attributes inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
DisplacementFieldType::Pointer m_DisplacementField
 
ModifiedTimeType m_DisplacementFieldSetTime
 
JacobianType m_IdentityJacobian
 
InterpolatorType::Pointer m_Interpolator
 
DisplacementFieldType::Pointer m_InverseDisplacementField
 
InterpolatorType::Pointer m_InverseInterpolator
 
- Protected Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
DirectionChangeMatrix m_DirectionChange
 
FixedParametersType m_FixedParameters
 
ParametersType m_Parameters
 
- Protected Attributes inherited from itk::LightObject
AtomicInt< int > m_ReferenceCount
 

Private Member Functions

virtual void SetFixedParametersFromVelocityField () const
 

Member Typedef Documentation

template<typename TParametersValueType , unsigned int NDimensions>
typedef SmartPointer<const Self> itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ConstPointer

Definition at line 44 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::DerivativeType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DerivativeType

Derivative type

Definition at line 82 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::DirectionType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DirectionType

Definition at line 103 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef DisplacementFieldType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldPointer

Definition at line 92 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::DisplacementFieldType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldType

Define the displacement field type and corresponding interpolator type.

Definition at line 91 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::FixedParametersType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersType

Type of the input parameters.

Definition at line 59 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::FixedParametersValueType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersValueType

Definition at line 60 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::IndexType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::IndexType

Standard types for the velocity Field

Definition at line 99 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::InputPointType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InputPointType

Standard coordinate point type for this class.

Definition at line 71 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::InputVectorPixelType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InputVectorPixelType

Definition at line 78 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::InputVectorType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InputVectorType

Standard vector type for this class.

Definition at line 75 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::InverseTransformBasePointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InverseTransformBasePointer

InverseTransform type.

Definition at line 50 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::NumberOfParametersType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::NumberOfParametersType

The number of parameters defininig this transform.

Definition at line 68 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef ImageVectorOptimizerParametersHelper<ScalarType, Dimension, VelocityFieldDimension> itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OptimizerParametersHelperType

Define the internal parameter helper used to access the field

Definition at line 112 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::OutputPointType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OutputPointType

Definition at line 72 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::OutputVectorPixelType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OutputVectorPixelType

Definition at line 79 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::OutputVectorType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OutputVectorType

Definition at line 76 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::ParametersType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ParametersType

Definition at line 61 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::ParametersValueType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ParametersValueType

Definition at line 62 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::PixelType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::PixelType

Definition at line 105 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef SmartPointer<Self> itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Pointer

Definition at line 43 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::PointType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::PointType

Definition at line 104 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::RegionType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::RegionType

Definition at line 100 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ScalarType

Scalar type.

Definition at line 56 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldTransform itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Self

Standard class typedefs.

Definition at line 41 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::SizeType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SizeType

Definition at line 101 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::SpacingType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SpacingType

Definition at line 102 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef DisplacementFieldTransform<TParametersValueType, NDimensions> itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Superclass

Definition at line 42 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Superclass::TransformCategoryType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::TransformCategoryType

Transform category type.

Definition at line 65 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldInterpolatorType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldInterpolatorPointer

Definition at line 108 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VectorInterpolateImageFunction<VelocityFieldType, ScalarType> itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldInterpolatorType

Definition at line 107 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef VelocityFieldType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldPointer

Definition at line 96 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
typedef Image<OutputVectorType, VelocityFieldDimension> itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldType

Define the displacement field type and corresponding interpolator type.

Definition at line 95 of file itkVelocityFieldTransform.h.

Constructor & Destructor Documentation

template<typename TParametersValueType , unsigned int NDimensions>
itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldTransform ( )
protected
template<typename TParametersValueType , unsigned int NDimensions>
virtual itk::VelocityFieldTransform< TParametersValueType, NDimensions >::~VelocityFieldTransform ( )
overrideprotectedvirtual

Member Function Documentation

template<typename TParametersValueType , unsigned int NDimensions>
DisplacementFieldType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::CopyDisplacementField ( const DisplacementFieldType ) const
protected
template<typename TParametersValueType , unsigned int NDimensions>
virtual::itk::LightObject::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

template<typename TParametersValueType , unsigned int NDimensions>
bool itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetInverse ( Self inverse) const

Return an inverse of this transform.

template<typename TParametersValueType , unsigned int NDimensions>
virtual InverseTransformBasePointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetInverseTransform ( ) const
overridevirtual

Return an inverse of this transform.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

template<typename TParametersValueType , unsigned int NDimensions>
virtual ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetLowerTimeBound ( ) const
virtual

Get the lower time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

template<typename TParametersValueType , unsigned int NDimensions>
virtual VelocityFieldType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetModifiableVelocityField ( )
virtual

Get/Set the velocity field. Set the displacement field. Create special set accessor to update interpolator and assign displacement field to transform parameters container.

template<typename TParametersValueType , unsigned int NDimensions>
virtual VelocityFieldInterpolatorType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetModifiableVelocityFieldInterpolator ( )
virtual

Get/Set the interpolator. Create out own set accessor that assigns the velocity field

template<typename TParametersValueType , unsigned int NDimensions>
virtual const char* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetNameOfClass ( ) const
virtual
template<typename TParametersValueType , unsigned int NDimensions>
virtual unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetNumberOfIntegrationSteps ( ) const
virtual

Get the number of integration steps. Default = 100;

template<typename TParametersValueType , unsigned int NDimensions>
virtual ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetUpperTimeBound ( ) const
virtual

Get the upper time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

template<typename TParametersValueType , unsigned int NDimensions>
virtual const VelocityFieldType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityField ( ) const
virtual

Get/Set the velocity field. Set the displacement field. Create special set accessor to update interpolator and assign displacement field to transform parameters container.

template<typename TParametersValueType , unsigned int NDimensions>
virtual const VelocityFieldInterpolatorType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldInterpolator ( ) const
virtual

Get/Set the interpolator. Create out own set accessor that assigns the velocity field

template<typename TParametersValueType , unsigned int NDimensions>
virtual const unsigned long& itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldSetTime ( ) const
virtual

Get the modification time of velocity field

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::IntegrateVelocityField ( )
inlinevirtual

Trigger the computation of the displacement field by integrating the velocity field.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >, and itk::TimeVaryingVelocityFieldTransform< TParametersValueType, NDimensions >.

Definition at line 158 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
virtual LightObject::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InternalClone ( ) const
overrideprotectedvirtual

Clone the current transform

Reimplemented from itk::Transform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType , unsigned int NDimensions>
static Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::New ( )
static

New macro for creation of through a Smart Pointer

template<typename TParametersValueType , unsigned int NDimensions>
void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetDisplacementField ( DisplacementFieldType displacementField)
inlineoverridevirtual

Set the deformation field. We want to override the base class implementation since we don't want to optimize over the deformation field for this class but rather the time-varying velocity field

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

Definition at line 138 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetFixedParameters ( const FixedParametersType )
overridevirtual

This method sets the fixed parameters of the transform. For a displacement field transform, the fixed parameters are the following: field size, field origin, field spacing, and field direction.

Note: If a displacement field already exists, this function creates a new one with zero displacement (identity transform). If an inverse displacement field exists, a new one is also created.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetFixedParametersFromVelocityField ( ) const
privatevirtual

Convenience method which reads the information from the current velocity field into m_FixedParameters.

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetLowerTimeBound ( ScalarType  _arg)
virtual

Set the lower time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetNumberOfIntegrationSteps ( unsigned int  _arg)
virtual

Set the number of integration steps. Default = 100;

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetUpperTimeBound ( ScalarType  _arg)
virtual

Set the upper time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityField ( VelocityFieldType )
virtual

Get/Set the velocity field. Set the displacement field. Create special set accessor to update interpolator and assign displacement field to transform parameters container.

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityFieldInterpolator ( VelocityFieldInterpolatorType )
virtual

Get/Set the interpolator. Create out own set accessor that assigns the velocity field

template<typename TParametersValueType , unsigned int NDimensions>
virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::UpdateTransformParameters ( const DerivativeType update,
ScalarType  factor = 1.0 
)
overridevirtual

Member Data Documentation

template<typename TParametersValueType , unsigned int NDimensions>
const unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Dimension = NDimensions
static

Dimension of the vector spaces.

Definition at line 88 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_LowerTimeBound
protected

Definition at line 205 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_NumberOfIntegrationSteps
protected

Definition at line 208 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_UpperTimeBound
protected

Definition at line 206 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldPointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityField
protected

Definition at line 210 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
VelocityFieldInterpolatorType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldInterpolator
protected

The interpolator.

Definition at line 213 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
unsigned long itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldSetTime
protected

Track when the VELOCITY field was last set/assigned, as distinct from when it may have had its contents modified.

Definition at line 217 of file itkVelocityFieldTransform.h.

template<typename TParametersValueType , unsigned int NDimensions>
const unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldDimension = NDimensions + 1
static

Dimension of the velocity field .

Definition at line 85 of file itkVelocityFieldTransform.h.


The documentation for this class was generated from the following file: