#include <itkGPUFiniteDifferenceFunction.h>

Inheritance diagram for itk::GPUFiniteDifferenceFunction< TImageType >:

Collaboration diagram for itk::GPUFiniteDifferenceFunction< TImageType >:

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::DefaultBoundaryConditionType	DefaultBoundaryConditionType
typedef Superclass	DifferenceFunctionType
typedef Superclass::FloatOffsetType	FloatOffsetType
typedef Superclass::ImageType	ImageType
typedef Superclass::NeighborhoodType	NeighborhoodType
typedef Superclass::PixelRealType	PixelRealType
typedef Superclass::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RadiusType	RadiusType
typedef GPUFiniteDifferenceFunction	Self
typedef FiniteDifferenceFunction < TImageType >	Superclass
typedef Superclass::TimeStepType	TimeStepType
Public Types inherited from itk::FiniteDifferenceFunction< TImageType >
typedef Vector< PixelRealType, itkGetStaticConstMacro(ImageDimension) >	NeighborhoodScalesType
Public Types inherited from itk::LightObject

Public Member Functions
virtual const char *	GetNameOfClass () const
virtual void	GPUAllocateMetricData (unsigned int)
virtual void	GPUComputeUpdate (const typename TImageType::Pointer output, typename TImageType::Pointer update, void *gd)=0
virtual void	GPUReleaseMetricData ()
virtual void	InitializeIteration ()

virtual PixelType	ComputeUpdate (const NeighborhoodType &, void *, const FloatOffsetType &)
Public Member Functions inherited from itk::FiniteDifferenceFunction< TImageType >
virtual TimeStepType	ComputeGlobalTimeStep (void *GlobalData) const =0
const NeighborhoodScalesType	ComputeNeighborhoodScales () const
virtual void *	GetGlobalDataPointer () const =0
const RadiusType &	GetRadius () const
virtual void	ReleaseGlobalDataPointer (void *GlobalData) const =0
void	SetRadius (const RadiusType &r)
void	SetScaleCoefficients (PixelRealType vals[ImageDimension])
Public Member Functions inherited from itk::LightObject
virtual Pointer	CreateAnother () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const

Static Public Attributes
static const unsigned int	ImageDimension = ImageType::ImageDimension
Static Public Attributes inherited from itk::FiniteDifferenceFunction< TImageType >

Protected Member Functions
	GPUFiniteDifferenceFunction ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~GPUFiniteDifferenceFunction ()
Protected Member Functions inherited from itk::FiniteDifferenceFunction< TImageType >
	FiniteDifferenceFunction ()
	~FiniteDifferenceFunction ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Protected Attributes
int	m_ComputeUpdateGPUKernelHandle
GPUKernelManager::Pointer	m_GPUKernelManager
Protected Attributes inherited from itk::FiniteDifferenceFunction< TImageType >
RadiusType	m_Radius
PixelRealType	m_ScaleCoefficients [ImageDimension]
Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock

Private Member Functions
	GPUFiniteDifferenceFunction (const Self &)
void	operator= (const Self &)

Detailed Description

template<class TImageType>
class itk::GPUFiniteDifferenceFunction< TImageType >

This is a base class of GPU finite difference function. Note that unlike most GPU classes, derived class of GPUFiniteDifferenceFunction does not have corresponding CPU class as its parent but only has CPU class FiniteDifferenceFunction as its base class. Therefore, only members of FiniteDifferenceFunction are reused by its derived GPU classes.

How to use this class: GPUFiniteDifferenceFunction must be subclassed to add functionality for GPUComputeUpdate.

Definition at line 47 of file itkGPUFiniteDifferenceFunction.h.

Member Typedef Documentation

template<class TImageType>

typedef SmartPointer< const Self > itk::GPUFiniteDifferenceFunction< TImageType >::ConstPointer

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

Definition at line 56 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::DefaultBoundaryConditionType itk::GPUFiniteDifferenceFunction< TImageType >::DefaultBoundaryConditionType

The default boundary condition for finite difference functions that is used unless overridden in the Evaluate() method.

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Definition at line 74 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass itk::GPUFiniteDifferenceFunction< TImageType >::DifferenceFunctionType

Definition at line 54 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::FloatOffsetType itk::GPUFiniteDifferenceFunction< TImageType >::FloatOffsetType

A floating point offset from an image grid location. Used for interpolation among grid values in a neighborhood.

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, and itk::GPUAnisotropicDiffusionFunction< TImage >.

Definition at line 84 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::ImageType itk::GPUFiniteDifferenceFunction< TImageType >::ImageType

Extract some parameters from the image type

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUScalarAnisotropicDiffusionFunction< TImage >, and itk::GPUAnisotropicDiffusionFunction< TImage >.

Definition at line 59 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::NeighborhoodType itk::GPUFiniteDifferenceFunction< TImageType >::NeighborhoodType

Neighborhood type

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUScalarAnisotropicDiffusionFunction< TImage >, and itk::GPUAnisotropicDiffusionFunction< TImage >.

Definition at line 80 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::PixelRealType itk::GPUFiniteDifferenceFunction< TImageType >::PixelRealType

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

Definition at line 64 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::PixelType itk::GPUFiniteDifferenceFunction< TImageType >::PixelType

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUScalarAnisotropicDiffusionFunction< TImage >, and itk::GPUAnisotropicDiffusionFunction< TImage >.

Definition at line 63 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef SmartPointer< Self > itk::GPUFiniteDifferenceFunction< TImageType >::Pointer

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

Definition at line 55 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::RadiusType itk::GPUFiniteDifferenceFunction< TImageType >::RadiusType

Neighborhood radius type

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUScalarAnisotropicDiffusionFunction< TImage >, and itk::GPUAnisotropicDiffusionFunction< TImage >.

Definition at line 77 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef GPUFiniteDifferenceFunction itk::GPUFiniteDifferenceFunction< TImageType >::Self

Standard class typedefs.

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

Definition at line 52 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef FiniteDifferenceFunction< TImageType > itk::GPUFiniteDifferenceFunction< TImageType >::Superclass

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

Definition at line 53 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

typedef Superclass::TimeStepType itk::GPUFiniteDifferenceFunction< TImageType >::TimeStepType

Define the TimeStepType to always be double.

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUScalarAnisotropicDiffusionFunction< TImage >, and itk::GPUAnisotropicDiffusionFunction< TImage >.

Definition at line 70 of file itkGPUFiniteDifferenceFunction.h.

Constructor & Destructor Documentation

template<class TImageType>

itk::GPUFiniteDifferenceFunction< TImageType >::GPUFiniteDifferenceFunction ( )

inlineprotected

Definition at line 114 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

itk::GPUFiniteDifferenceFunction< TImageType >::~GPUFiniteDifferenceFunction ( )

inlineprotected

Definition at line 117 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

itk::GPUFiniteDifferenceFunction< TImageType >::GPUFiniteDifferenceFunction ( const Self & )

private

Member Function Documentation

template<class TImageType>

virtual PixelType itk::GPUFiniteDifferenceFunction< TImageType >::ComputeUpdate	(	const NeighborhoodType &	,
		void *	,
		const FloatOffsetType &
	)

inlinevirtual

Empty implementation - this will not be used by GPU filters

Implements itk::FiniteDifferenceFunction< TImageType >.

Definition at line 90 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

virtual const char* itk::GPUFiniteDifferenceFunction< TImageType >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods)

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

template<class TImageType>

virtual void itk::GPUFiniteDifferenceFunction< TImageType >::GPUAllocateMetricData ( unsigned int )

inlinevirtual

Allocate GPU buffers for computing metric statitics

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 107 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

virtual void itk::GPUFiniteDifferenceFunction< TImageType >::GPUComputeUpdate	(	const typename TImageType::Pointer	output,
		typename TImageType::Pointer	update,
		void *	gd
	)

pure virtual

GPU function to compute update buffer

Implemented in itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >.

template<class TImageType>

virtual void itk::GPUFiniteDifferenceFunction< TImageType >::GPUReleaseMetricData ( )

inlinevirtual

Release GPU buffers for computing metric statitics

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 111 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

virtual void itk::GPUFiniteDifferenceFunction< TImageType >::InitializeIteration ( )

inlinevirtual

This method allows the function to set its state before each iteration of the finite difference solver (image filter) that uses it. This is a thread-safe time to manipulate the object's state.

An example of how this can be used: the AnisotropicDiffusionFunction class of FiniteDifferenceFunction use this method to pre-calculate an average gradient magnitude across the entire image region. This value is set in the function object and used by the ComputeUpdate() methods that are called at each pixel as a constant.

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, and itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >.

Definition at line 86 of file itkGPUFiniteDifferenceFunction.h.

template<class TImageType>

void itk::GPUFiniteDifferenceFunction< TImageType >::operator= ( const Self & )

private

Mutex lock to protect modification to the reference count

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, itk::GPUGradientNDAnisotropicDiffusionFunction< TImage >, and itk::GPUScalarAnisotropicDiffusionFunction< TImage >.

template<class TImageType>

void itk::GPUFiniteDifferenceFunction< TImageType >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

inlineprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::FiniteDifferenceFunction< TImageType >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >, itk::GPUAnisotropicDiffusionFunction< TImage >, and itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 120 of file itkGPUFiniteDifferenceFunction.h.