#include <itkGPUPDEDeformableRegistrationFunction.h>

Inheritance diagram for itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >:

Collaboration diagram for itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >:

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef TDeformationField	DeformationFieldType
typedef DeformationFieldType::Pointer	DeformationFieldTypePointer
typedef FixedImageType::ConstPointer	FixedImagePointer
typedef TFixedImage	FixedImageType
typedef MovingImageType::ConstPointer	MovingImagePointer
typedef TMovingImage	MovingImageType
typedef SmartPointer< Self >	Pointer
typedef GPUPDEDeformableRegistrationFunction	Self
typedef GPUFiniteDifferenceFunction < TDeformationField >	Superclass
Public Types inherited from itk::GPUFiniteDifferenceFunction< TDeformationField >
typedef Superclass::DefaultBoundaryConditionType	DefaultBoundaryConditionType
typedef Superclass	DifferenceFunctionType
typedef Superclass::FloatOffsetType	FloatOffsetType
typedef Superclass::ImageType	ImageType
typedef Superclass::NeighborhoodType	NeighborhoodType
typedef Superclass::PixelRealType	PixelRealType
typedef Superclass::PixelType	PixelType
typedef Superclass::RadiusType	RadiusType
typedef Superclass::TimeStepType	TimeStepType
Public Types inherited from itk::FiniteDifferenceFunction< TDeformationField >
typedef Vector< PixelRealType, itkGetStaticConstMacro(ImageDimension) >	NeighborhoodScalesType
Public Types inherited from itk::LightObject

Public Member Functions
DeformationFieldType *	GetDeformationField (void)
double	GetEnergy () const
const FixedImageType *	GetFixedImage (void) const
double	GetGradientStep () const
const MovingImageType *	GetMovingImage (void) const
virtual const char *	GetNameOfClass () const
bool	GetNormalizeGradient () const
void	SetDeformationField (DeformationFieldTypePointer ptr)
void	SetEnergy (double e)
void	SetFixedImage (const FixedImageType *ptr)
void	SetGradientStep (double e)
void	SetMovingImage (const MovingImageType *ptr)
void	SetNormalizeGradient (bool e)
Public Member Functions inherited from itk::GPUFiniteDifferenceFunction< TDeformationField >
virtual void	GPUAllocateMetricData (unsigned int)
virtual void	GPUComputeUpdate (const typename TDeformationField::Pointer output, typename TDeformationField::Pointer update, void *gd)=0
virtual void	GPUReleaseMetricData ()
virtual void	InitializeIteration ()
virtual PixelType	ComputeUpdate (const NeighborhoodType &, void *, const FloatOffsetType &)
Public Member Functions inherited from itk::FiniteDifferenceFunction< TDeformationField >
virtual TimeStepType	ComputeGlobalTimeStep (void *GlobalData) const =0
const NeighborhoodScalesType	ComputeNeighborhoodScales () const
virtual void *	GetGlobalDataPointer () const =0
const RadiusType &	GetRadius () const
virtual void	ReleaseGlobalDataPointer (void *GlobalData) const =0
void	SetRadius (const RadiusType &r)
void	SetScaleCoefficients (PixelRealType vals[ImageDimension])
Public Member Functions inherited from itk::LightObject
virtual Pointer	CreateAnother () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const

Protected Member Functions
	GPUPDEDeformableRegistrationFunction ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~GPUPDEDeformableRegistrationFunction ()
Protected Member Functions inherited from itk::GPUFiniteDifferenceFunction< TDeformationField >
	GPUFiniteDifferenceFunction ()
	~GPUFiniteDifferenceFunction ()
Protected Member Functions inherited from itk::FiniteDifferenceFunction< TDeformationField >
	FiniteDifferenceFunction ()
	~FiniteDifferenceFunction ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Protected Attributes
DeformationFieldTypePointer	m_DeformationField
double	m_Energy
FixedImagePointer	m_FixedImage
double	m_GradientStep
MovingImagePointer	m_MovingImage
bool	m_NormalizeGradient
Protected Attributes inherited from itk::GPUFiniteDifferenceFunction< TDeformationField >
int	m_ComputeUpdateGPUKernelHandle
GPUKernelManager::Pointer	m_GPUKernelManager
Protected Attributes inherited from itk::FiniteDifferenceFunction< TDeformationField >
RadiusType	m_Radius
PixelRealType	m_ScaleCoefficients [ImageDimension]
Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock

Private Member Functions
	GPUPDEDeformableRegistrationFunction (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Static Public Attributes inherited from itk::GPUFiniteDifferenceFunction< TDeformationField >
static const unsigned int	ImageDimension
Static Public Attributes inherited from itk::FiniteDifferenceFunction< TDeformationField >

Detailed Description

template<class TFixedImage, class TMovingImage, class TDeformationField>
class itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >

This is an abstract base class for all PDE functions which drives a deformable registration algorithm. It is used by PDEDeformationRegistrationFilter subclasses to compute the output deformation field which will map a moving image onto a fixed image.

This class is templated over the fixed image type, moving image type and the deformation field type.

See also:: PDEDeformableRegistrationFilter

Definition at line 41 of file itkGPUPDEDeformableRegistrationFunction.h.

Member Typedef Documentation

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef SmartPointer< const Self > itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::ConstPointer

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 49 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef TDeformationField itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::DeformationFieldType

Deformation field type.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 64 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef DeformationFieldType::Pointer itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::DeformationFieldTypePointer

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 65 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef FixedImageType::ConstPointer itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::FixedImagePointer

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 61 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef TFixedImage itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::FixedImageType

FixedImage image type.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 60 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef MovingImageType::ConstPointer itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::MovingImagePointer

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 57 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef TMovingImage itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::MovingImageType

MovingImage image type.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 53 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef SmartPointer< Self > itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::Pointer

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 48 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef GPUPDEDeformableRegistrationFunction itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::Self

Standard class typedefs.

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 46 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

typedef GPUFiniteDifferenceFunction< TDeformationField > itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::Superclass

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 47 of file itkGPUPDEDeformableRegistrationFunction.h.

Constructor & Destructor Documentation

template<class TFixedImage , class TMovingImage , class TDeformationField >

itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GPUPDEDeformableRegistrationFunction ( )

inlineprotected

Definition at line 123 of file itkGPUPDEDeformableRegistrationFunction.h.

References NULL.

template<class TFixedImage , class TMovingImage , class TDeformationField >

itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::~GPUPDEDeformableRegistrationFunction ( )

inlineprotected

Definition at line 133 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GPUPDEDeformableRegistrationFunction ( const Self & )

private

Member Function Documentation

template<class TFixedImage , class TMovingImage , class TDeformationField >

DeformationFieldType* itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetDeformationField ( void )

inline

Get the deformation field. This function should have been declared const. It is not for backward compatibility reasons.

Definition at line 99 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

double itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetEnergy ( ) const

inline

Definition at line 107 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

const FixedImageType* itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetFixedImage ( void ) const

inline

Get the fixed image.

Definition at line 86 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

double itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetGradientStep ( ) const

inline

Definition at line 113 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

const MovingImageType* itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetMovingImage ( void ) const

inline

Get the moving image.

Definition at line 74 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

virtual const char* itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods)

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

template<class TFixedImage , class TMovingImage , class TDeformationField >

bool itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetNormalizeGradient ( ) const

inline

Definition at line 119 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::operator= ( const Self & )

private

Mutex lock to protect modification to the reference count

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

inlineprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::GPUFiniteDifferenceFunction< TDeformationField >.

Reimplemented in itk::GPUDemonsRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 136 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetDeformationField ( DeformationFieldTypePointer ptr )

inline

Set the deformation field image.

Definition at line 92 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetEnergy ( double e )

inline

Definition at line 104 of file itkGPUPDEDeformableRegistrationFunction.h.

References itk::Math::e.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetFixedImage ( const FixedImageType * ptr )

inline

Set the fixed image.

Definition at line 80 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetGradientStep ( double e )

inline

Definition at line 110 of file itkGPUPDEDeformableRegistrationFunction.h.

References itk::Math::e.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetMovingImage ( const MovingImageType * ptr )

inline

Set the moving image.

Definition at line 68 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

void itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetNormalizeGradient ( bool e )

inline

Definition at line 116 of file itkGPUPDEDeformableRegistrationFunction.h.

References itk::Math::e.

Member Data Documentation

template<class TFixedImage , class TMovingImage , class TDeformationField >

DeformationFieldTypePointer itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_DeformationField

protected

The deformation field.

Definition at line 152 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

double itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_Energy

mutableprotected

Definition at line 154 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

FixedImagePointer itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_FixedImage

protected

The fixed image.

Definition at line 149 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

double itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_GradientStep

mutableprotected

Definition at line 158 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

MovingImagePointer itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_MovingImage

protected

The moving image.

Definition at line 146 of file itkGPUPDEDeformableRegistrationFunction.h.

template<class TFixedImage , class TMovingImage , class TDeformationField >

bool itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_NormalizeGradient

protected

Definition at line 156 of file itkGPUPDEDeformableRegistrationFunction.h.

The documentation for this class was generated from the following file:

itkGPUPDEDeformableRegistrationFunction.h

Public Types

Public Member Functions

Protected Member Functions

Protected Attributes

Private Member Functions

Additional Inherited Members

Detailed Description

template<class TFixedImage, class TMovingImage, class TDeformationField> class itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<class TFixedImage, class TMovingImage, class TDeformationField>
class itk::GPUPDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >