ITK
4.2.0
Insight Segmentation and Registration Toolkit
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#include <itkImageToImageMetricv4.h>
Static Public Attributes | |
static const DimensionType | FixedImageDimension = Superclass::FixedDimension |
static const DimensionType | MovingImageDimension = Superclass::MovingDimension |
static const DimensionType | VirtualImageDimension = Superclass::VirtualDimension |
Static Public Attributes inherited from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage > | |
static const DimensionType | FixedDimension |
static const DimensionType | MovingDimension |
static const DimensionType | VirtualDimension |
Private Member Functions | |
ImageToImageMetricv4 (const Self &) | |
void | MapFixedSampledPointSetToVirtual (void) |
void | operator= (const Self &) |
Private Attributes | |
DerivativeValueType | m_FloatingPointCorrectionResolution |
bool | m_HaveMadeGetValueWarning |
SizeValueType | m_NumberOfSkippedFixedSampledPoints |
bool | m_UseFloatingPointCorrection |
Additional Inherited Members |
Computes similarity between regions of two images, using two user-supplied transforms, a 'fixed' transform and a 'moving' transform.
Templated over the fixed and moving image types, as well as an optional VirtualImage type to define the virtual domain. The VirtualImage type defaults to TFixedImage.
If the user does not set the virtual domain explicitly, then it is created during the call to Initialize
from the fixed image by copying its information. See ObjectToObjectMetric for more discussion on the virtual domain.
At a minimum, the user must: 1) Set images using SetFixedImage and SetMovingImage. 2) Call Initialize.
Image gradient calculations
Image gradients can be calculated in one of two ways: 1) Using a gradient image filter, by setting Use
[Fixed|Moving]ImageGradientFilter to true. By default this is set as an itkGradientRecursiveGaussianImageFilter, a smoothed gradient filter. A filter uses more memory, because it calculates all gradients at once and stores them in an image. The advantage of pre-calculation is for the fixed image gradients, since they only need be calculated once, and for metrics that need to access image gradients more than once for a particular point. The fixed image gradients are only calculated once when this option is set, during Initialize
. 2) Otherwise, an image gradient calculator based on ImageFunction is used. By default the CentralDifferenceImageFunction is used. This calculation is not smoothed and gives different results than GradientRecursiveGaussianImageFilter. The advantage is that less memory is used. However for the fixed image, it means needlessly computing the image gradients at each iteration of a registration instead of just computing once at the beginning. The user can supply a different function by calling SetFixedImageGradientCalculator and/or SetMovingImageGradientCalculator.
Both image gradient calculation methods are threaded. Generally it is not recommended to use different image gradient methods for the fixed and moving images because the methods return different results.
Image Masks
Image masks are supported using SetMovingImageMask or SetFixedImageMask. If the image mask is sparse, see the comments for use of sparse point sets.
Sparse Sampling
Sparse sampling is performed by supplying an arbitrary point list over which to evaluate the metric. It's presumed that the user will be working in terms of the fixed image domain, and thus the point list is expected to be in the fixed domain. Internally, the points are transformed into the virtual domain as needed.
Threading
This class is threaded. Threading is handled by friend classes ImageToImageMetricv4GetValueAndDerivativeThreaderBase and ImageToImageMetricv4GetValueAndDerivativeThreader. Dense and sparse evaluation are handled by template specialization of the ImageToImageMetricv4GetValueAndDerivativeThreader::ThreadedExecution method, in order to iterate over either all points in the virtual space in the case of dense evaluation, or a list of points in the sparse case.
Methods and members of ImageToImageMetricv4 are accessed by the threading class using its m_Associate member, which points to the containing instance of ImageToImageMetricv4.
Pre- and post-processing for threaded operation is handled in ImageToImageMetricv4GetValueAndDerivativeThreaderBase::BeforeThreadedExecution, and ImageToImageMetricv4GetValueAndDerivativeThreaderBase::AfterThreadedExecution, respectively.
Derived classes:
The GetValue method may be overridden to provide better-optimized or otherwise different behavior as needed.
Derived classes must derive a threader class from ImageToImageMetricv4GetValueAndDerivativeThreader, from which a DenseGetValueAndDerivativeThreader and SparseGetValueAndDerivativeThreader must be defined. Then,
must be called in the constructor.
The ProcessPoint method of the derived threader must be overriden to provide the metric-specific evaluation.
To access methods and members within the derived metric class from the derived threader class, the user must cast m_Associate to the type of the derived metric class.
See ImageToImageMetricv4Test
for a clear example of what a derived class must implement and do.
Definition at line 156 of file itkImageToImageMetricv4.h.
typedef SmartPointer<const Self> itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::ConstPointer |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 165 of file itkImageToImageMetricv4.h.
typedef Superclass::CoordinateRepresentationType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::CoordinateRepresentationType |
Type used for representing parameter values
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 174 of file itkImageToImageMetricv4.h.
typedef GradientRecursiveGaussianImageFilter< FixedImageType, FixedImageGradientImageType > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::DefaultFixedImageGradientFilter |
Default image gradient filter types
Definition at line 320 of file itkImageToImageMetricv4.h.
typedef GradientRecursiveGaussianImageFilter< MovingImageType, MovingImageGradientImageType > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::DefaultMovingImageGradientFilter |
Definition at line 323 of file itkImageToImageMetricv4.h.
typedef Superclass::DerivativeType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::DerivativeType |
Type of the metric derivative.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 348 of file itkImageToImageMetricv4.h.
typedef DerivativeType::ValueType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::DerivativeValueType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 349 of file itkImageToImageMetricv4.h.
typedef Superclass::DimensionType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::DimensionType |
Dimension type
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 184 of file itkImageToImageMetricv4.h.
typedef CovariantVector< FixedRealType, itkGetStaticConstMacro(FixedImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedGradientPixelType |
Type of the filter used to calculate the gradients. Note that RealType is always double (or long double for long double pixel-type).
Definition at line 289 of file itkImageToImageMetricv4.h.
typedef FixedImageType::ConstPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageConstPointer |
Definition at line 209 of file itkImageToImageMetricv4.h.
typedef FixedImageGradientCalculatorType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientCalculatorPointer |
Definition at line 340 of file itkImageToImageMetricv4.h.
typedef ImageFunction<FixedImageType, CovariantVector<double, itkGetStaticConstMacro( FixedImageDimension )>, CoordinateRepresentationType> itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientCalculatorType |
Image gradient calculator types. The TOutput template parameter is chosen to match that of CentralDiffererenceImageFunction.
Definition at line 331 of file itkImageToImageMetricv4.h.
typedef FixedImageGradientFilterType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientFilterPointer |
Definition at line 313 of file itkImageToImageMetricv4.h.
typedef ImageToImageFilter< FixedImageType, FixedImageGradientImageType > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientFilterType |
Definition at line 298 of file itkImageToImageMetricv4.h.
typedef FixedImageGradientImageType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientImagePointer |
Type of the filter used to calculate the gradients. Note that RealType is always double (or long double for long double pixel-type).
Definition at line 294 of file itkImageToImageMetricv4.h.
typedef Image< FixedGradientPixelType, itkGetStaticConstMacro(FixedImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientImageType |
Type of the filter used to calculate the gradients. Note that RealType is always double (or long double for long double pixel-type).
Definition at line 292 of file itkImageToImageMetricv4.h.
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Definition at line 523 of file itkImageToImageMetricv4.h.
typedef CovariantVector< CoordinateRepresentationType, itkGetStaticConstMacro(FixedImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageGradientType |
Image derivatives types
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 272 of file itkImageToImageMetricv4.h.
typedef FixedImageType::IndexType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageIndexType |
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 211 of file itkImageToImageMetricv4.h.
typedef FixedImageMaskType::ConstPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageMaskConstPointer |
Definition at line 245 of file itkImageToImageMetricv4.h.
typedef FixedImageMaskType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageMaskPointer |
Definition at line 244 of file itkImageToImageMetricv4.h.
typedef SpatialObject< itkGetStaticConstMacro(FixedImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageMaskType |
Type for the mask of the fixed image. Only pixels that are "inside" this mask will be considered for the computation of the metric
Definition at line 243 of file itkImageToImageMetricv4.h.
typedef FixedImageType::PixelType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImagePixelType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 206 of file itkImageToImageMetricv4.h.
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private |
Only floating-point images are currently supported. To support integer images, several small changes must be made
Definition at line 707 of file itkImageToImageMetricv4.h.
typedef FixedImageType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImagePointer |
Definition at line 208 of file itkImageToImageMetricv4.h.
typedef FixedImageType::PointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImagePointType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 210 of file itkImageToImageMetricv4.h.
typedef TFixedImage itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedImageType |
Image-accessor typedefs
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 205 of file itkImageToImageMetricv4.h.
typedef Superclass::FixedInputPointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedInputPointType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 190 of file itkImageToImageMetricv4.h.
typedef FixedInterpolatorType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedInterpolatorPointer |
Definition at line 266 of file itkImageToImageMetricv4.h.
typedef InterpolateImageFunction< FixedImageType, CoordinateRepresentationType > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedInterpolatorType |
Type of the Interpolator Base class
Definition at line 262 of file itkImageToImageMetricv4.h.
typedef Superclass::FixedOutputPointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedOutputPointType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 191 of file itkImageToImageMetricv4.h.
typedef FixedImagePixelType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedPixelType |
Definition at line 207 of file itkImageToImageMetricv4.h.
typedef NumericTraits< FixedImagePixelType >::RealType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedRealType |
Type of the filter used to calculate the gradients. Note that RealType is always double (or long double for long double pixel-type).
Definition at line 286 of file itkImageToImageMetricv4.h.
typedef FixedSampledPointSetType::ConstPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedSampledPointSetConstPointer |
Definition at line 257 of file itkImageToImageMetricv4.h.
typedef FixedSampledPointSetType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedSampledPointSetPointer |
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 256 of file itkImageToImageMetricv4.h.
typedef PointSet<typename FixedImageType::PixelType, itkGetStaticConstMacro(FixedImageDimension)> itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedSampledPointSetType |
Type of the point set used for sparse sampling.
Definition at line 255 of file itkImageToImageMetricv4.h.
typedef Superclass::FixedTransformJacobianType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedTransformJacobianType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 201 of file itkImageToImageMetricv4.h.
typedef Superclass::FixedTransformParametersType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedTransformParametersType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 192 of file itkImageToImageMetricv4.h.
typedef Superclass::FixedTransformPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedTransformPointer |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 189 of file itkImageToImageMetricv4.h.
typedef Superclass::FixedTransformType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::FixedTransformType |
Transform types from Superclass
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 188 of file itkImageToImageMetricv4.h.
typedef Superclass::GradientSourceType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::GradientSourceType |
Graident source type
Reimplemented from itk::ObjectToObjectMetricBase.
Definition at line 181 of file itkImageToImageMetricv4.h.
typedef Superclass::DimensionType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::ImageDimensionType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 185 of file itkImageToImageMetricv4.h.
typedef Superclass::InternalComputationValueType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::InternalComputationValueType |
Type used internally for computations
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 168 of file itkImageToImageMetricv4.h.
typedef Superclass::JacobianType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::JacobianType |
Jacobian type. This is the same for all transforms
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 200 of file itkImageToImageMetricv4.h.
typedef Superclass::MeasureType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MeasureType |
Type of the measure.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 345 of file itkImageToImageMetricv4.h.
typedef CovariantVector< MovingRealType, itkGetStaticConstMacro(MovingImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingGradientPixelType |
Definition at line 304 of file itkImageToImageMetricv4.h.
typedef MovingImageType::ConstPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageConstPointer |
Definition at line 216 of file itkImageToImageMetricv4.h.
typedef MovingImageGradientCalculatorType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientCalculatorPointer |
Definition at line 342 of file itkImageToImageMetricv4.h.
typedef ImageFunction<MovingImageType, CovariantVector<double, itkGetStaticConstMacro( MovingImageDimension )>, CoordinateRepresentationType> itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientCalculatorType |
Image gradient calculator types. The TOutput template parameter is chosen to match that of CentralDiffererenceImageFunction.
Definition at line 336 of file itkImageToImageMetricv4.h.
typedef MovingImageGradientFilterType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientFilterPointer |
Definition at line 315 of file itkImageToImageMetricv4.h.
typedef ImageToImageFilter< MovingImageType, MovingImageGradientImageType > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientFilterType |
Definition at line 311 of file itkImageToImageMetricv4.h.
typedef MovingImageGradientImageType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientImagePointer |
Definition at line 308 of file itkImageToImageMetricv4.h.
typedef Image< MovingGradientPixelType, itkGetStaticConstMacro(MovingImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientImageType |
Definition at line 307 of file itkImageToImageMetricv4.h.
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Definition at line 526 of file itkImageToImageMetricv4.h.
typedef CovariantVector< CoordinateRepresentationType, itkGetStaticConstMacro(MovingImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageGradientType |
Image derivatives types
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 275 of file itkImageToImageMetricv4.h.
typedef MovingImageType::IndexType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageIndexType |
Definition at line 219 of file itkImageToImageMetricv4.h.
typedef MovingImageMaskType::ConstPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageMaskConstPointer |
Definition at line 251 of file itkImageToImageMetricv4.h.
typedef MovingImageMaskType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageMaskPointer |
Definition at line 250 of file itkImageToImageMetricv4.h.
typedef SpatialObject< itkGetStaticConstMacro(MovingImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageMaskType |
Type for the mask of the moving image. Only pixels that are "inside" this mask will be considered for the computation of the metric
Definition at line 249 of file itkImageToImageMetricv4.h.
typedef MovingImageType::PixelType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImagePixelType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 213 of file itkImageToImageMetricv4.h.
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Only floating-point images are currently supported. To support integer images, several small changes must be made
Definition at line 708 of file itkImageToImageMetricv4.h.
typedef MovingImageType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImagePointer |
Definition at line 215 of file itkImageToImageMetricv4.h.
typedef MovingImageType::PointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImagePointType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 217 of file itkImageToImageMetricv4.h.
typedef MovingImageType::RegionType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageRegionType |
Definition at line 218 of file itkImageToImageMetricv4.h.
typedef TMovingImage itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingImageType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 212 of file itkImageToImageMetricv4.h.
typedef Superclass::MovingInputPointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingInputPointType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 196 of file itkImageToImageMetricv4.h.
typedef MovingInterpolatorType::Pointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingInterpolatorPointer |
Definition at line 267 of file itkImageToImageMetricv4.h.
typedef InterpolateImageFunction< MovingImageType, CoordinateRepresentationType > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingInterpolatorType |
Definition at line 265 of file itkImageToImageMetricv4.h.
typedef Superclass::MovingOutputPointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingOutputPointType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 197 of file itkImageToImageMetricv4.h.
typedef MovingImagePixelType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingPixelType |
Definition at line 214 of file itkImageToImageMetricv4.h.
typedef NumericTraits< MovingImagePixelType >::RealType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingRealType |
Definition at line 301 of file itkImageToImageMetricv4.h.
typedef Superclass::MovingTransformJacobianType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingTransformJacobianType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 202 of file itkImageToImageMetricv4.h.
typedef Superclass::MovingTransformParametersType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingTransformParametersType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 198 of file itkImageToImageMetricv4.h.
typedef Superclass::MovingTransformPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingTransformPointer |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 195 of file itkImageToImageMetricv4.h.
typedef Superclass::MovingTransformType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::MovingTransformType |
Type of the Transform Base classes
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 194 of file itkImageToImageMetricv4.h.
typedef Superclass::NumberOfParametersType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::NumberOfParametersType |
Type to represent the number of parameters that are being optimized at any given iteration of the optimizer.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 353 of file itkImageToImageMetricv4.h.
typedef Superclass::ParametersType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::ParametersType |
Type of the parameters.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 177 of file itkImageToImageMetricv4.h.
typedef Superclass::ParametersValueType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::ParametersValueType |
ParametersType typedef. It defines a position in the optimization search space.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 178 of file itkImageToImageMetricv4.h.
typedef SmartPointer<Self> itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::Pointer |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 164 of file itkImageToImageMetricv4.h.
typedef ImageToImageMetricv4 itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::Self |
Standard class typedefs.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 162 of file itkImageToImageMetricv4.h.
typedef ObjectToObjectMetric<TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage> itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::Superclass |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 163 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualDirectionType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualDirectionType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 230 of file itkImageToImageMetricv4.h.
typedef CovariantVector< CoordinateRepresentationType, itkGetStaticConstMacro(VirtualImageDimension) > itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualImageGradientType |
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 280 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualImagePointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualImagePointer |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 223 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualImageType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualImageType |
Types for the virtual domain
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 222 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualIndexType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualIndexType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 232 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualPointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualOriginType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 228 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualPixelType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualPixelType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 224 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualPointSetPointer itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualPointSetPointer |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 234 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualPointSetType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualPointSetType |
Point set in the virtual domain
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 233 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualPointType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualPointType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 229 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualSizeType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualRadiusType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 231 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualRegionType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualRegionType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 225 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualSizeType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualSizeType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 226 of file itkImageToImageMetricv4.h.
typedef Superclass::VirtualSpacingType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::VirtualSpacingType |
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 227 of file itkImageToImageMetricv4.h.
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Compute fixed warped image derivatives for an index at virtual domain.
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Compute image derivatives for a Fixed point.
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Computes the gradients of the fixed image, using the GradientFilter, assigning the output to to m_FixedImageGradientImage.
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Compute image derivatives for a moving point.
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Compute image derivatives for a moving point.
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Computes the gradients of the moving image, using the GradientFilter, assigning the output to to m_MovingImageGradientImage.
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This method returns the derivative based on the current transformation(s).
Implements itk::ObjectToObjectMetricBase.
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Get the Fixed Image.
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Set/Get gradient calculators
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Set/Get the gradient filter
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Get Fixed Gradient Image.
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Set/Get the fixed image mask.
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Get a pointer to the fixed interpolator.
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Set/Get the fixed image domain sampling point set See main documentation regarding using fixed vs virtual domain for the point set.
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Set/Get the floating point resolution used optionally by the derivatives. If this is set, for example to 1e5, then the derivative will have precision up to 5 points beyond the decimal point. And precision beyond that will be truncated.
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Set number of threads to use. This the maximum number of threads to use when multithreaded. The actual number of threads used (may be less than this value) can be obtained with GetNumberOfThreadsUsed
.
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Get the Moving Image.
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Set/Get gradient calculators
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Set/Get the gradient filter
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Get Moving Gradient Image.
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Set/Get the moving image mask.
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Get a pointer to the Moving interpolator.
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Run-time type information (and related methods).
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
SizeValueType itk::ImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >::GetNumberOfDomainPoints | ( | ) | const |
Get the number of points in the domain used to evaluate the metric. This will differ depending on whether a sampled point set or dense sampling is used, and will be greater than or equal to GetNumberOfValidPoints().
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Get the number of sampled fixed sampled points that are deemed invalid during conversion to virtual domain in Initialize(). For informational purposes.
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Get number of threads to used in the the GetValueAndDerivative
calculation. Only valid after GetValueAndDerivative
has been called.
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Get number of valid points from most recent update
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
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Set/Get gradient computation via an image filter, for fixed image.
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Set/Get flag to use fixed image domain sampling point set
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Set/Get the option for applying floating point resolution truncation to derivative calculations in global support cases. False by default. It is only applied in global support cases (i.e. with global-support transforms) because in these cases, the per-point derivative values are added cumulatively, which can lead to loss of precision when the sum becomes much larger than the values being added. The goal is more consistent results across the number of threads used for an evaluation. The resolution can be changed using SetFloatingPointCorrectionResolution().
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Set/Get gradient computation via an image filter.
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Calculate and return the value for the metric based on the current transformation(s). The result is both returned, and stored in the m_Value member variable.
Implements itk::ObjectToObjectMetricBase.
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
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Calculate and return both the value for the metric and its derivative. This calls the SparseGetValueAndDerivativeThreader if UsedFixedSampledPointSet
is true, and DenseGetValueAndDerivativeThreader otherwise. The threaders in turn call ProcessPoint
on each point in the domain to be examined.
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
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Perform the actual threaded processing, using the appropriate GetValueAndDerivativeThreader. Results get written to member vars. This is available as a separate method so it can be used by dervied classes that implement their own GetValueAndDerivative, and/or need to run the processing loop more than once.
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Get the virtual domain sampling point set
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Initialize the Metric by making sure that all the components are present and plugged together correctly, and initializing internal variables as required. This is for one-time initialization, e.g. before starting an optimization process.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
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Initialize the default image gradient filters. This must only be called once the fixed and moving images have been set.
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Initialize the default image gradient filters. This must only be called once the fixed and moving images have been set.
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Perform any initialization required before each evaluation of GetValueAndDerivative
. This is distinct from Initialize, which is called only once before a number of iterations, e.g. before a registration loop.
Reimplemented in itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
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Map the fixed point set samples to the virtual domain
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Mutex lock to protect modification to the reference count
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
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Connect the Fixed Image.
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Set/Get gradient calculators
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Set/Get the gradient filter
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Set/Get the fixed image mask.
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Set/Get the fixed image mask.
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Connect the fixed interpolator.
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Set/Get the fixed image domain sampling point set See main documentation regarding using fixed vs virtual domain for the point set.
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Set/Get the fixed image domain sampling point set See main documentation regarding using fixed vs virtual domain for the point set.
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Set/Get the floating point resolution used optionally by the derivatives. If this is set, for example to 1e5, then the derivative will have precision up to 5 points beyond the decimal point. And precision beyond that will be truncated.
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Set number of threads to use. This the maximum number of threads to use when multithreaded. The actual number of threads used (may be less than this value) can be obtained with GetNumberOfThreadsUsed
.
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Connect the Moving Image.
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Set/Get gradient calculators
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Set/Get the gradient filter
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Set/Get the moving image mask.
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Set/Get the moving image mask.
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Connect the Moving interpolator.
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Set/Get gradient computation via an image filter, for fixed image.
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Set/Get flag to use fixed image domain sampling point set
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Set/Get the option for applying floating point resolution truncation to derivative calculations in global support cases. False by default. It is only applied in global support cases (i.e. with global-support transforms) because in these cases, the per-point derivative values are added cumulatively, which can lead to loss of precision when the sum becomes much larger than the values being added. The goal is more consistent results across the number of threads used for an evaluation. The resolution can be changed using SetFloatingPointCorrectionResolution().
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Set/Get gradient computation via an image filter.
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Returns a flag. True if arbitrary virtual domain points will always correspond to data points. False if not. For example, point-set metrics return false because only some virtual domain points will correspond to points within the point sets.
Implements itk::ObjectToObjectMetric< TFixedImage::ImageDimension, TMovingImage::ImageDimension, TVirtualImage >.
Definition at line 514 of file itkImageToImageMetricv4.h.
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Transform a point from VirtualImage domain to FixedImage domain. This function also checks if mapped point is within the mask if one is set, and that is within the fixed image buffer, in which case the return value will be true. mappedFixedPoint
and mappedFixedPixelValue
are returned, and mappedFixedImageGradient
is returned if computeImageGradient
is set. All return values are in the virtual domain.
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Transform a point from VirtualImage domain to MovingImage domain.
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This class requires OnlyDefinedForFloatingPointTypes0 in the form of ( itk::Concept::IsFloatingPoint<FixedImagePixelValueType> )
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This class requires OnlyDefinedForFloatingPointTypes1 in the form of ( itk::Concept::IsFloatingPoint<MovingImagePixelValueType> )
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Set/Get gradient computation via an image filter, for fixed image.
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Set/Get gradient computation via an image filter, for fixed image.
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Set/Get flag to use fixed image domain sampling point set
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Set/Get flag to use fixed image domain sampling point set
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Set/Get the option for applying floating point resolution truncation to derivative calculations in global support cases. False by default. It is only applied in global support cases (i.e. with global-support transforms) because in these cases, the per-point derivative values are added cumulatively, which can lead to loss of precision when the sum becomes much larger than the values being added. The goal is more consistent results across the number of threads used for an evaluation. The resolution can be changed using SetFloatingPointCorrectionResolution().
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Set/Get the option for applying floating point resolution truncation to derivative calculations in global support cases. False by default. It is only applied in global support cases (i.e. with global-support transforms) because in these cases, the per-point derivative values are added cumulatively, which can lead to loss of precision when the sum becomes much larger than the values being added. The goal is more consistent results across the number of threads used for an evaluation. The resolution can be changed using SetFloatingPointCorrectionResolution().
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Set/Get gradient computation via an image filter.
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Set/Get gradient computation via an image filter.
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Definition at line 530 of file itkImageToImageMetricv4.h.
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Reimplemented in itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 531 of file itkImageToImageMetricv4.h.
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Definition at line 528 of file itkImageToImageMetricv4.h.
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Reimplemented in itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 529 of file itkImageToImageMetricv4.h.
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Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 237 of file itkImageToImageMetricv4.h.
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Pointer to default gradient filter. Used for easier initialization of the default filter.
Definition at line 649 of file itkImageToImageMetricv4.h.
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Definition at line 651 of file itkImageToImageMetricv4.h.
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Definition at line 536 of file itkImageToImageMetricv4.h.
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Derivative results holder. User a raw pointer so we can point it to a user-provided object. This is used in internal methods so the user-provided variable does not have to be passed around. It also enables safely sharing a derivative object between metrics during multi-variate analsys, for memory efficiency. Will be NULL if not set.
Definition at line 667 of file itkImageToImageMetricv4.h.
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Definition at line 628 of file itkImageToImageMetricv4.h.
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Image gradient calculators
Definition at line 658 of file itkImageToImageMetricv4.h.
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Gradient filters
Definition at line 643 of file itkImageToImageMetricv4.h.
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Gradient images to store gradient filter output.
Definition at line 654 of file itkImageToImageMetricv4.h.
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Definition at line 634 of file itkImageToImageMetricv4.h.
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Masks
Definition at line 670 of file itkImageToImageMetricv4.h.
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Pointers to interpolators
Definition at line 632 of file itkImageToImageMetricv4.h.
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Sampled point sets
Definition at line 674 of file itkImageToImageMetricv4.h.
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Definition at line 702 of file itkImageToImageMetricv4.h.
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Flag for warning about use of GetValue. Will be removed when GetValue implementation is improved.
Definition at line 691 of file itkImageToImageMetricv4.h.
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Definition at line 629 of file itkImageToImageMetricv4.h.
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Definition at line 659 of file itkImageToImageMetricv4.h.
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Definition at line 644 of file itkImageToImageMetricv4.h.
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Definition at line 655 of file itkImageToImageMetricv4.h.
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Definition at line 635 of file itkImageToImageMetricv4.h.
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Definition at line 671 of file itkImageToImageMetricv4.h.
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Definition at line 633 of file itkImageToImageMetricv4.h.
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Definition at line 699 of file itkImageToImageMetricv4.h.
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Definition at line 540 of file itkImageToImageMetricv4.h.
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Flag to control use of precomputed gradient filter image or gradient calculator for image gradient calculations.
Definition at line 639 of file itkImageToImageMetricv4.h.
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Flag to use FixedSampledPointSet, i.e. Sparse sampling.
Definition at line 678 of file itkImageToImageMetricv4.h.
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Definition at line 701 of file itkImageToImageMetricv4.h.
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Definition at line 640 of file itkImageToImageMetricv4.h.
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Definition at line 675 of file itkImageToImageMetricv4.h.
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Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 238 of file itkImageToImageMetricv4.h.
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Reimplemented in itk::ANTSNeighborhoodCorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::MattesMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::CorrelationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::DemonsImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, itk::JointHistogramMutualInformationImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >, and itk::MeanSquaresImageToImageMetricv4< TFixedImage, TMovingImage, TVirtualImage >.
Definition at line 239 of file itkImageToImageMetricv4.h.