itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage > Class Template Reference

#include <itkLabelMapContourOverlayImageFilter.h>

Inheritance diagram for itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >:

Collaboration diagram for itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >:

List of all members.

Public Types
enum	{   PLAIN = 0,   CONTOUR = 1,   SLICE_CONTOUR = 2 }
enum	{   HIGH_LABEL_ON_TOP = 0,   LOW_LABEL_ON_TOP = 1 }
typedef SmartPointer< const Self >	ConstPointer
typedef FeatureImageType::ConstPointer	FeatureImageConstPointer
typedef FeatureImageType::PixelType	FeatureImagePixelType
typedef FeatureImageType::Pointer	FeatureImagePointer
typedef FeatureImageType::RegionType	FeatureImageRegionType
typedef TFeatureImage	FeatureImageType
typedef Functor::LabelOverlayFunctor < FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType >	FunctorType
typedef OutputImageType::IndexType	IndexType
typedef LabelMapType::ConstPointer	LabelMapConstPointer
typedef LabelMapType::PixelType	LabelMapPixelType
typedef LabelMapType::Pointer	LabelMapPointer
typedef LabelMapType::RegionType	LabelMapRegionType
typedef TLabelMap	LabelMapType
typedef LabelMapType::LabelObjectType	LabelObjectType
typedef LabelObjectType::LabelType	LabelType
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TOutputImage	OutputImageType
typedef SmartPointer< Self >	Pointer
typedef OutputImageType::RegionType	RegionType
typedef LabelMapContourOverlayImageFilter	Self
typedef OutputImageType::SizeType	SizeType
typedef LabelMapFilter < TLabelMap, TOutputImage >	Superclass
Public Types inherited from itk::LabelMapFilter< TLabelMap, TOutputImage >
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef TLabelMap	InputImageType
Public Types inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage >
Public Types inherited from itk::ImageSource< TOutputImage >
typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
Public Types inherited from itk::ProcessObject
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef std::vector < DataObjectIdentifierType >	NameArray
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
FeatureImageType *	GetFeatureImage ()
virtual const char *	GetNameOfClass () const
void	SetFeatureImage (TFeatureImage *input)
void	SetInput1 (TLabelMap *input)
void	SetInput2 (TFeatureImage *input)
virtual void	SetOpacity (double _arg)
virtual const double &	GetOpacity ()
virtual void	SetType (int _arg)
virtual const int &	GetType ()
virtual void	SetPriority (int _arg)
virtual const int &	GetPriority ()
virtual void	SetDilationRadius (SizeType _arg)
virtual const SizeType &	GetDilationRadius ()
virtual void	SetContourThickness (SizeType _arg)
virtual const SizeType &	GetContourThickness ()
virtual void	SetSliceDimension (int _arg)
virtual const int &	GetSliceDimension ()
Public Member Functions inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage >
const InputImageType *	GetInput (void) const
const InputImageType *	GetInput (unsigned int idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PushBackInput (const InputImageType *image)
virtual void	PushFrontInput (const InputImageType *image)
virtual void	SetInput (const InputImageType *image)
virtual void	SetInput (unsigned int, const TLabelMap *image)
Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput (unsigned int idx)
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (DataObject *output)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType *	GetOutput (void)
const OutputImageType *	GetOutput (void) const
virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual const bool &	GetAbortGenerateData ()
NameArray	GetInputNames () const
MultiThreader *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
virtual const float &	GetProgress ()
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	SetProgress (float _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)
DataObjectPointerArray	GetInputs ()
DataObjectPointerArray	GetOutputs ()
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Attributes
static const unsigned int	LabelMapDimension = TLabelMap::ImageDimension
static const unsigned int	OutputImageDimension = TOutputImage::ImageDimension
static const unsigned int	ImageDimension = TOutputImage::ImageDimension
Static Public Attributes inherited from itk::LabelMapFilter< TLabelMap, TOutputImage >
static const unsigned int	InputImageDimension
Static Public Attributes inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage >
Static Public Attributes inherited from itk::ImageSource< TOutputImage >

Protected Member Functions
virtual void	BeforeThreadedGenerateData ()
void	EnlargeOutputRequestedRegion (DataObject *)
void	GenerateInputRequestedRegion ()
virtual LabelMapType *	GetLabelMap ()
	LabelMapContourOverlayImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual void	ThreadedProcessLabelObject (LabelObjectType *labelObject)
	~LabelMapContourOverlayImageFilter ()
Protected Member Functions inherited from itk::LabelMapFilter< TLabelMap, TOutputImage >
virtual void	AfterThreadedGenerateData ()
virtual void	ThreadedProcessLabelObject (LabelObjectType *labelObject)
	LabelMapFilter ()
	~LabelMapFilter ()
Protected Member Functions inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
	ImageToImageFilter ()
virtual void	VerifyInputInformation ()
	~ImageToImageFilter ()
void	PushBackInput (const DataObject *input)
void	PushFrontInput (const DataObject *input)
Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void	AllocateOutputs ()
virtual void	GenerateData ()
	ImageSource ()
virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual	~ImageSource ()
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs ()
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs ()
bool	IsIndexedName (const DataObjectIdentifierType &) const
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType	MakeNameFromIndex (DataObjectPointerArraySizeType) const
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
void	SetRequiredInputNames (const NameArray &)
virtual void	VerifyPreconditions ()
	~ProcessObject ()
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
	LabelMapContourOverlayImageFilter (const Self &)
void	operator= (const Self &)

Private Attributes
Barrier::Pointer	m_Barrier
SizeType	m_ContourThickness
SizeType	m_DilationRadius
double	m_Opacity
int	m_Priority
int	m_SliceDimension
LabelMapPointer	m_TempImage
int	m_Type

Additional Inherited Members
Protected Attributes inherited from itk::LabelMapFilter< TLabelMap, TOutputImage >
FastMutexLock::Pointer	m_LabelObjectContainerLock

---

Detailed Description

template<class TLabelMap, class TFeatureImage, class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>
class itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >

Apply a colormap to the contours (outlines) of each object in a label map and superimpose it on top of the feature image.

The feature image is typically the image from which the labeling was produced. Use the SetInput function to set the LabelMap, and the SetFeatureImage function to set the feature image.

Apply a colormap to a label map and put it on top of the input image. The set of colors is a good selection of distinct colors. The opacity of the label map can be defined by the user. A background label produce a gray pixel with the same intensity than the input one.

Author:

Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176

See also:

LabelMapToBinaryImageFilter, LabelMapToLabelImageFilter, LabelMapOverlayImageFilter

Wiki Examples:

• All Examples

• Color the boundaries of labeled regions in an image

Definition at line 57 of file itkLabelMapContourOverlayImageFilter.h.

---

Member Typedef Documentation

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef SmartPointer<const Self> itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::ConstPointer

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 65 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef FeatureImageType::ConstPointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageConstPointer

Definition at line 78 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef FeatureImageType::PixelType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImagePixelType

Definition at line 80 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef FeatureImageType::Pointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImagePointer

Definition at line 77 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef FeatureImageType::RegionType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageRegionType

Definition at line 79 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef TFeatureImage itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageType

Definition at line 76 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef Functor::LabelOverlayFunctor<FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType> itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FunctorType

Definition at line 91 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::IndexType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::IndexType

Definition at line 87 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapType::ConstPointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapConstPointer

Definition at line 70 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapType::PixelType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapPixelType

Definition at line 72 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapType::Pointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapPointer

Definition at line 69 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapType::RegionType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapRegionType

Definition at line 71 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef TLabelMap itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapType

Some convenient typedefs.

Definition at line 68 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapType::LabelObjectType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelObjectType

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 73 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelObjectType::LabelType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelType

Definition at line 74 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::ConstPointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageConstPointer

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 84 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::PixelType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImagePixelType

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 86 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::Pointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImagePointer

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 83 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::RegionType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageRegionType

Superclass typedefs.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 85 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef TOutputImage itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageType

Some convenient typedefs.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 82 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef SmartPointer<Self> itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Pointer

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 64 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::RegionType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::RegionType

Definition at line 89 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapContourOverlayImageFilter itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Self

Standard class typedefs.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 62 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef OutputImageType::SizeType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SizeType

Definition at line 88 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

typedef LabelMapFilter<TLabelMap, TOutputImage> itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Superclass

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 63 of file itkLabelMapContourOverlayImageFilter.h.

---

Member Enumeration Documentation

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

anonymous enum

Enumerator:

PLAIN
CONTOUR
SLICE_CONTOUR

Definition at line 102 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

anonymous enum

Enumerator:

HIGH_LABEL_ON_TOP
LOW_LABEL_ON_TOP

Definition at line 109 of file itkLabelMapContourOverlayImageFilter.h.

---

Constructor & Destructor Documentation

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapContourOverlayImageFilter ( )

protected

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::~LabelMapContourOverlayImageFilter ( )

inlineprotected

Definition at line 186 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapContourOverlayImageFilter ( const Self &  )

private

---

Member Function Documentation

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::BeforeThreadedGenerateData ( void  )

protectedvirtual

If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual::itk::LightObject::Pointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::EnlargeOutputRequestedRegion ( DataObject *  )

protectedvirtual

LabelMapContourOverlayImageFilter will produce the entire output.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GenerateInputRequestedRegion ( )

protectedvirtual

LabelMapContourOverlayImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const SizeType& itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetContourThickness ( )

virtual

Set/Get the contour thickness - 1 by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const SizeType& itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetDilationRadius ( )

virtual

Set/Get the object dilation radius - 0 by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

FeatureImageType* itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetFeatureImage ( )

inline

Get the feature image

Definition at line 130 of file itkLabelMapContourOverlayImageFilter.h.

References itk::ProcessObject::GetInput().

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual LabelMapType* itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetLabelMap ( )

inlineprotectedvirtual

Return the label collection image to use. This method may be overloaded if the label collection image to use is not the input image.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 204 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const char* itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetNameOfClass ( ) const

virtual

Runtime information support.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const double& itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetOpacity ( )

virtual

Set/Get the opacity of the colored label image. The value must be between 0 and 1

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const int& itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetPriority ( )

virtual

Set/Get the object priority - HIGH_LABEL_ON_TOP by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const int& itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetSliceDimension ( )

virtual

Set/Get the slice dimension - defaults to image dimension - 1.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual const int& itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::GetType ( )

virtual

Set/Get the overlay type - CONTOUR is used by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

static Pointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::New ( )

static

Standard New method.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::operator= ( const Self &  )

private

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetContourThickness ( SizeType  _arg )

virtual

Set/Get the contour thickness - 1 by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetDilationRadius ( SizeType  _arg )

virtual

Set/Get the object dilation radius - 0 by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetFeatureImage ( TFeatureImage *  input )

inline

Set the feature image

Definition at line 123 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetInput1 ( TLabelMap *  input )

inline

Set the input image

Definition at line 136 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetInput2 ( TFeatureImage *  input )

inline

Set the feature image

Definition at line 142 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetOpacity ( double  _arg )

virtual

Set/Get the opacity of the colored label image. The value must be between 0 and 1

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetPriority ( int  _arg )

virtual

Set/Get the object priority - HIGH_LABEL_ON_TOP by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetSliceDimension ( int  _arg )

virtual

Set/Get the slice dimension - defaults to image dimension - 1.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SetType ( int  _arg )

virtual

Set/Get the overlay type - CONTOUR is used by default.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::ThreadedGenerateData ( const OutputImageRegionType &  outputRegionForThread, ThreadIdType  threadId  )

protectedvirtual

If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). This superclass will automatically split the output image into a number of pieces, spawn multiple threads, and call ThreadedGenerateData() in each thread. Prior to spawning threads, the BeforeThreadedGenerateData() method is called. After all the threads have completed, the AfterThreadedGenerateData() method is called. If an image processing filter cannot support threading, that filter should provide an implementation of the GenerateData() method instead of providing an implementation of ThreadedGenerateData(). If a filter provides a GenerateData() method as its implementation, then the filter is responsible for allocating the output data. If a filter provides a ThreadedGenerateData() method as its implementation, then the output memory will allocated automatically by this superclass. The ThreadedGenerateData() method should only produce the output specified by "outputThreadRegion" parameter. ThreadedGenerateData() cannot write to any other portion of the output image (as this is responsibility of a different thread).

See also:

GenerateData(), SplitRequestedRegion()

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

virtual void itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::ThreadedProcessLabelObject ( LabelObjectType *  labelObject )

protectedvirtual

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Member Data Documentation

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

const unsigned int itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::ImageDimension = TOutputImage::ImageDimension

static

ImageDimension constants

Definition at line 99 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

const unsigned int itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapDimension = TLabelMap::ImageDimension

static

ImageDimension constants

Definition at line 95 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

Barrier::Pointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_Barrier

private

Definition at line 214 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

SizeType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_ContourThickness

private

Definition at line 217 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

SizeType itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_DilationRadius

private

Definition at line 218 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

double itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_Opacity

private

Definition at line 213 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

int itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_Priority

private

Definition at line 216 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

int itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_SliceDimension

private

Definition at line 219 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

LabelMapPointer itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_TempImage

private

Definition at line 221 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

int itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::m_Type

private

Definition at line 215 of file itkLabelMapContourOverlayImageFilter.h.

template<class TLabelMap , class TFeatureImage , class TOutputImage = Image< RGBPixel< typename TFeatureImage::PixelType >, TFeatureImage::ImageDimension >>

const unsigned int itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageDimension = TOutputImage::ImageDimension

static

ImageDimension constants

Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.

Definition at line 97 of file itkLabelMapContourOverlayImageFilter.h.

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The documentation for this class was generated from the following file:

• itkLabelMapContourOverlayImageFilter.h