template<class TInputImage, class TOutputImage, class TBinaryPriorImage = Image< unsigned char, 2 >>
class itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >
Perform the segmentation of 2D images (single channel) by Voronoi Diagram. Used as a node of the segmentation toolkits. The homogeneity operator here is the testing of mean and standar deviation value. By setting the tolerance level, the "internal" region was defined as those that is closed to the gold-standard value in the sense that the difference is within the tolerance value.
See VoronoiSegmentationImageFilterBase for detail description of voronoi segmenation principles.
The parameters here are:
- the estimation of the statistics of the object. (mean and std.)
- the tolerance for the classification. (around the mean ans std. estimated value).
The parameters can also be automatically set by given a prior, as a binary image.
Detail information about this algorithm can be found in: " Semi-automated color segmentation of anatomical tissue," C. Imelinska, M. Downes, and W. Yuan Computerized Medical Imaging and Graphics, Vor.24, pp 173-180, 2000.
Definition at line 53 of file itkVoronoiSegmentationImageFilter.h.
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virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
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virtual double | GetMeanPercentError () const |
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virtual const char * | GetNameOfClass () const |
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virtual double | GetSTDTolerance () const |
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void | SetMeanPercentError (double x) |
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virtual void | SetSTDTolerance (double _arg) |
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void | TakeAPrior (const BinaryObjectImage *aprior) |
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| typedef (Concept::SameDimension< InputImageDimension, OutputImageDimension >) SameDimensionCheck |
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| typedef (Concept::Convertible< int, typename TOutputImage::PixelType >) IntConvertibleToOutputCheck |
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virtual void | SetMean (double _arg) |
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virtual double | GetMean () const |
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virtual void | SetSTD (double _arg) |
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virtual double | GetSTD () const |
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virtual void | SetMeanTolerance (double _arg) |
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virtual double | GetMeanTolerance () const |
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virtual double | GetSTDPercentError () const |
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void | SetSTDPercentError (double x) |
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void | BeforeNextStep (void) |
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virtual ::itk::LightObject::Pointer | CreateAnother (void) const |
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void | DrawDiagram (VDImagePointer result, unsigned char incolor, unsigned char outcolor, unsigned char boundcolor) |
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virtual void | EnlargeOutputRequestedRegion (DataObject *output) |
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virtual void | GenerateInputRequestedRegion () |
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virtual int | GetLastStepSeeds () const |
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virtual int | GetNumberOfSeedsToAdded () const |
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PointType | GetSeed (int SeedID) |
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VoronoiPointer | GetVoronoiDiagram (void) |
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virtual void | MakeSegmentBoundary (void) |
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virtual void | MakeSegmentObject (void) |
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void | RunSegment (void) |
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void | RunSegmentOneStep (void) |
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virtual void | TakeAPrior (const BinaryObjectImage *) |
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virtual void | SetNumberOfSeeds (int _arg) |
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virtual int | GetNumberOfSeeds () const |
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virtual void | SetMinRegion (int _arg) |
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virtual int | GetMinRegion () const |
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virtual void | SetSteps (int _arg) |
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virtual int | GetSteps () const |
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virtual void | SetUseBackgroundInAPrior (bool _arg) |
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virtual bool | GetUseBackgroundInAPrior () const |
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virtual void | SetOutputBoundary (bool _arg) |
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virtual bool | GetOutputBoundary () const |
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virtual void | SetInteractiveSegmentation (bool _arg) |
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virtual bool | GetInteractiveSegmentation () const |
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virtual void | InteractiveSegmentationOn () |
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virtual void | InteractiveSegmentationOff () |
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virtual void | SetMeanDeviation (double _arg) |
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virtual double | GetMeanDeviation () const |
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virtual void | SetSize (SizeType _arg) |
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virtual SizeType | GetSize () const |
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void | SetSeeds (int num, SeedsIterator begin) |
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void | SetSeeds (SeedsType &seeds) |
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virtual double | GetCoordinateTolerance () |
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const InputImageType * | GetInput (void) const |
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const InputImageType * | GetInput (unsigned int idx) const |
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virtual void | PopBackInput () |
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virtual void | PopFrontInput () |
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virtual void | PushBackInput (const InputImageType *image) |
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virtual void | PushFrontInput (const InputImageType *image) |
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virtual void | SetCoordinateTolerance (double _arg) |
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virtual void | SetInput (const InputImageType *image) |
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virtual void | SetInput (unsigned int, const TInputImage *image) |
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virtual void | SetDirectionTolerance (double _arg) |
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virtual double | GetDirectionTolerance () |
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OutputImageType * | GetOutput (unsigned int idx) |
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virtual void | GraftNthOutput (unsigned int idx, DataObject *output) |
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virtual void | GraftOutput (DataObject *output) |
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virtual void | GraftOutput (const DataObjectIdentifierType &key, DataObject *output) |
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OutputImageType * | GetOutput (void) |
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const OutputImageType * | GetOutput (void) const |
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virtual
ProcessObject::DataObjectPointer | MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) |
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virtual void | AbortGenerateDataOff () |
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virtual void | AbortGenerateDataOn () |
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virtual const bool & | GetAbortGenerateData () |
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NameArray | GetInputNames () const |
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MultiThreader * | GetMultiThreader () const |
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DataObjectPointerArraySizeType | GetNumberOfIndexedInputs () const |
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DataObjectPointerArraySizeType | GetNumberOfInputs () const |
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DataObjectPointerArraySizeType | GetNumberOfOutputs () const |
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virtual
DataObjectPointerArraySizeType | GetNumberOfValidRequiredInputs () const |
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NameArray | GetOutputNames () const |
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virtual const float & | GetProgress () |
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NameArray | GetRequiredInputNames () const |
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bool | HasInput (const DataObjectIdentifierType &key) const |
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bool | HasOutput (const DataObjectIdentifierType &key) const |
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virtual DataObjectPointer | MakeOutput (const DataObjectIdentifierType &) |
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virtual void | PrepareOutputs () |
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virtual void | PropagateRequestedRegion (DataObject *output) |
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virtual void | ResetPipeline () |
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virtual void | SetAbortGenerateData (bool _arg) |
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virtual void | SetProgress (float _arg) |
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virtual void | Update () |
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virtual void | UpdateLargestPossibleRegion () |
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virtual void | UpdateOutputData (DataObject *output) |
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virtual void | UpdateOutputInformation () |
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void | UpdateProgress (float amount) |
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DataObjectPointerArray | GetInputs () |
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DataObjectPointerArray | GetOutputs () |
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DataObjectPointerArray | GetIndexedInputs () |
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DataObjectPointerArray | GetIndexedOutputs () |
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DataObjectPointerArraySizeType | GetNumberOfIndexedOutputs () const |
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virtual void | SetReleaseDataFlag (bool flag) |
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virtual bool | GetReleaseDataFlag () const |
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void | ReleaseDataFlagOn () |
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void | ReleaseDataFlagOff () |
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virtual void | SetReleaseDataBeforeUpdateFlag (bool _arg) |
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virtual const bool & | GetReleaseDataBeforeUpdateFlag () |
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virtual void | ReleaseDataBeforeUpdateFlagOn () |
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virtual void | ReleaseDataBeforeUpdateFlagOff () |
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virtual void | SetNumberOfThreads (ThreadIdType _arg) |
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virtual const ThreadIdType & | GetNumberOfThreads () |
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unsigned long | AddObserver (const EventObject &event, Command *) |
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unsigned long | AddObserver (const EventObject &event, Command *) const |
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virtual void | DebugOff () const |
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virtual void | DebugOn () const |
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Command * | GetCommand (unsigned long tag) |
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bool | GetDebug () const |
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MetaDataDictionary & | GetMetaDataDictionary (void) |
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const MetaDataDictionary & | GetMetaDataDictionary (void) const |
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virtual ModifiedTimeType | GetMTime () const |
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virtual const TimeStamp & | GetTimeStamp () const |
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bool | HasObserver (const EventObject &event) const |
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void | InvokeEvent (const EventObject &) |
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void | InvokeEvent (const EventObject &) const |
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virtual void | Modified () const |
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virtual void | Register () const |
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void | RemoveAllObservers () |
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void | RemoveObserver (unsigned long tag) |
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void | SetDebug (bool debugFlag) const |
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void | SetMetaDataDictionary (const MetaDataDictionary &rhs) |
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virtual void | SetReferenceCount (int) |
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virtual void | UnRegister () const |
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virtual void | Delete () |
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virtual int | GetReferenceCount () const |
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| itkCloneMacro (Self) |
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void | Print (std::ostream &os, Indent indent=0) const |
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virtual void | PrintSelf (std::ostream &os, Indent indent) const |
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| VoronoiSegmentationImageFilter () |
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| ~VoronoiSegmentationImageFilter () |
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virtual void | ClassifyDiagram (void) |
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void | drawLine (PointType p1, PointType p2) |
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void | drawVDline (VDImagePointer result, PointType p1, PointType p2, unsigned char color) |
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void | FillPolygon (PointTypeDeque vertlist, OutputPixelType color=1) |
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virtual void | GenerateAddingSeeds (void) |
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void | GenerateData (void) |
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void | GetPixelIndexFromPolygon (PointTypeDeque VertList, IndexList *PixelPool) |
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virtual bool | TestHomogeneity (IndexList &) |
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| VoronoiSegmentationImageFilterBase () |
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| ~VoronoiSegmentationImageFilterBase () |
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virtual void | CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion) |
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virtual void | CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion) |
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virtual void | VerifyInputInformation () |
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void | PushBackInput (const DataObject *input) |
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void | PushFrontInput (const DataObject *input) |
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| ImageToImageFilter () |
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| ~ImageToImageFilter () |
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virtual void | AfterThreadedGenerateData () |
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virtual void | AllocateOutputs () |
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virtual void | BeforeThreadedGenerateData () |
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| ImageSource () |
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virtual unsigned int | SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion) |
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virtual void | ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId) |
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virtual | ~ImageSource () |
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virtual void | AddInput (DataObject *input) |
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virtual void | AddOutput (DataObject *output) |
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bool | AddRequiredInputName (const DataObjectIdentifierType &) |
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virtual void | CacheInputReleaseDataFlags () |
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virtual void | GenerateOutputInformation () |
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virtual void | GenerateOutputRequestedRegion (DataObject *output) |
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virtual const
DataObjectPointerArraySizeType & | GetNumberOfRequiredOutputs () |
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bool | IsIndexedInputName (const DataObjectIdentifierType &) const |
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bool | IsIndexedOutputName (const DataObjectIdentifierType &) const |
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bool | IsRequiredInputName (const DataObjectIdentifierType &) const |
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| itkLegacyMacro (virtual void RemoveInput(DataObject *input)) |
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| itkLegacyMacro (virtual void RemoveOutput(DataObject *output)) |
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| itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num)) |
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| itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num)) |
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DataObjectPointerArraySizeType | MakeIndexFromInputName (const DataObjectIdentifierType &name) const |
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DataObjectPointerArraySizeType | MakeIndexFromOutputName (const DataObjectIdentifierType &name) const |
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DataObjectIdentifierType | MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const |
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DataObjectIdentifierType | MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const |
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| ProcessObject () |
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virtual void | PropagateResetPipeline () |
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virtual void | ReleaseInputs () |
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virtual void | RemoveInput (const DataObjectIdentifierType &key) |
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virtual void | RemoveInput (DataObjectPointerArraySizeType) |
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virtual void | RemoveOutput (const DataObjectIdentifierType &key) |
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virtual void | RemoveOutput (DataObjectPointerArraySizeType idx) |
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bool | RemoveRequiredInputName (const DataObjectIdentifierType &) |
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virtual void | RestoreInputReleaseDataFlags () |
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virtual void | SetInput (const DataObjectIdentifierType &key, DataObject *input) |
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virtual void | SetNthInput (DataObjectPointerArraySizeType num, DataObject *input) |
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virtual void | SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output) |
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void | SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num) |
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void | SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num) |
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virtual void | SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg) |
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virtual void | SetOutput (const DataObjectIdentifierType &key, DataObject *output) |
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virtual void | SetPrimaryInput (DataObject *input) |
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virtual void | SetPrimaryOutput (DataObject *output) |
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void | SetRequiredInputNames (const NameArray &) |
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virtual void | VerifyPreconditions () |
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| ~ProcessObject () |
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DataObject * | GetInput (const DataObjectIdentifierType &key) |
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const DataObject * | GetInput (const DataObjectIdentifierType &key) const |
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DataObject * | GetInput (DataObjectPointerArraySizeType) |
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const DataObject * | GetInput (DataObjectPointerArraySizeType idx) const |
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DataObject * | GetPrimaryInput () |
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const DataObject * | GetPrimaryInput () const |
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virtual void | SetPrimaryInputName (const DataObjectIdentifierType &key) |
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virtual const char * | GetPrimaryInputName () const |
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DataObject * | GetOutput (const DataObjectIdentifierType &key) |
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const DataObject * | GetOutput (const DataObjectIdentifierType &key) const |
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virtual void | SetPrimaryOutputName (const DataObjectIdentifierType &key) |
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virtual const char * | GetPrimaryOutputName () const |
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DataObject * | GetOutput (DataObjectPointerArraySizeType idx) |
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const DataObject * | GetOutput (DataObjectPointerArraySizeType idx) const |
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DataObject * | GetPrimaryOutput () |
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const DataObject * | GetPrimaryOutput () const |
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virtual void | SetNumberOfRequiredInputs (DataObjectPointerArraySizeType) |
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virtual const
DataObjectPointerArraySizeType & | GetNumberOfRequiredInputs () |
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| Object () |
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bool | PrintObservers (std::ostream &os, Indent indent) const |
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virtual void | SetTimeStamp (const TimeStamp &time) |
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virtual | ~Object () |
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virtual LightObject::Pointer | InternalClone () const |
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| LightObject () |
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virtual void | PrintHeader (std::ostream &os, Indent indent) const |
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virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
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virtual | ~LightObject () |
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