#include <itkShapePriorMAPCostFunction.h>

Inheritance diagram for itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >:

Collaboration diagram for itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >:

Detailed Description

template<typename TFeatureImage, typename TOutputPixel>
class itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >

Represents the maximum aprior (MAP) cost function used ShapePriorSegmentationLevelSetImageFilter to estimate the shape paramaeters.

This class follows the shape and pose parameters estimation developed in [1]. Note that this class returns the negative log of the MAP function. Using the negative function make this cost function compatible with generic optimizers which seeks the minimum of a cost function.

This class has two template parameters, the feature image type representing the edge potential map and the pixel type used to represent the output level set in the ShapePriorSegmentationLevelSetImageFilter.

See Also: ShapePriorSegmentationLevelSetImageFilter

REFERENCES

: [1] Leventon, M.E. et al. "Statistical Shape Influence in Geodesic Active Contours", CVPR 2000.

Examples:: Segmentation/GeodesicActiveContourShapePriorLevelSetImageFilter.cxx.

Definition at line 50 of file itkShapePriorMAPCostFunction.h.

Public Types
typedef Array< double >	ArrayType

typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::FeatureImagePointer	FeatureImagePointer

typedef Superclass::FeatureImageType	FeatureImageType

typedef Superclass::MeasureType	MeasureType

typedef Superclass::NodeContainerType	NodeContainerType

typedef Superclass::NodeType	NodeType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::PixelType	PixelType

typedef SmartPointer< Self >	Pointer

typedef ShapePriorMAPCostFunction	Self

typedef Superclass::ShapeFunctionType	ShapeFunctionType

typedef ShapePriorMAPCostFunctionBase < TFeatureImage, TOutputPixel >	Superclass

Public Types inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef FeatureImageType::ConstPointer	FeatureImagePointer

typedef TFeatureImage	FeatureImageType

typedef Superclass::MeasureType	MeasureType

typedef NodeContainerType::ConstPointer	NodeContainerPointer

typedef VectorContainer < unsigned int, NodeType >	NodeContainerType

typedef LevelSetNode < PixelType, itkGetStaticConstMacro(ImageDimension) >	NodeType

typedef Superclass::ParametersType	ParametersType

typedef TOutputPixel	PixelType

typedef SmartPointer< Self >	Pointer

typedef ShapePriorMAPCostFunctionBase	Self

typedef ShapeFunctionType::Pointer	ShapeFunctionPointer

typedef ShapeSignedDistanceFunction < double, itkGetStaticConstMacro(ImageDimension) >	ShapeFunctionType

typedef SingleValuedCostFunction	Superclass

Public Types inherited from itk::SingleValuedCostFunction
typedef SmartPointer< const Self >	ConstPointer

typedef Array < ParametersValueType >	DerivativeType

typedef double	MeasureType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef SingleValuedCostFunction	Self

typedef CostFunction	Superclass

Public Types inherited from itk::CostFunctionTemplate< TInternalComputationValueType >
typedef SmartPointer< const Self >	ConstPointer

typedef OptimizerParameters < TInternalComputationValueType >	ParametersType

typedef TInternalComputationValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef CostFunctionTemplate	Self

typedef Object	Superclass

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual MeasureType	ComputeLogGradientTerm (const ParametersType &parameters) const

virtual MeasureType	ComputeLogInsideTerm (const ParametersType &parameters) const

virtual MeasureType	ComputeLogPosePriorTerm (const ParametersType &parameters) const

virtual MeasureType	ComputeLogShapePriorTerm (const ParametersType &parameters) const

virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual const char *	GetNameOfClass () const

virtual void	Initialize (void) throw ( ExceptionObject )


virtual void	SetShapeParameterMeans (ArrayType _arg)

virtual ArrayType	GetShapeParameterMeans () const


virtual void	SetShapeParameterStandardDeviations (ArrayType _arg)

virtual ArrayType	GetShapeParameterStandardDeviations () const

Public Member Functions inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
virtual void	GetDerivative (const ParametersType &, DerivativeType &) const ITK_OVERRIDE

virtual unsigned int	GetNumberOfParameters (void) const ITK_OVERRIDE

virtual MeasureType	GetValue (const ParametersType &parameters) const ITK_OVERRIDE

virtual void	SetShapeFunction (ShapeFunctionType *_arg)

virtual ShapeFunctionType *	GetModifiableShapeFunction ()

virtual const ShapeFunctionType *	GetShapeFunction () const

virtual void	SetActiveRegion (const NodeContainerType *_arg)

virtual const NodeContainerType *	GetActiveRegion () const

virtual void	SetFeatureImage (const FeatureImageType *_arg)

virtual const FeatureImageType *	GetFeatureImage () const

Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary (void)

const MetaDataDictionary &	GetMetaDataDictionary (void) const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const ITK_OVERRIDE

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) ITK_OVERRIDE

virtual void	UnRegister () const ITK_OVERRIDE

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static const unsigned int	ImageDimension = TFeatureImage::ImageDimension

Static Public Attributes inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
static const unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
void	PrintSelf (std::ostream &os, Indent indent) const

	ShapePriorMAPCostFunction ()

virtual	~ShapePriorMAPCostFunction ()

Protected Member Functions inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
	ShapePriorMAPCostFunctionBase ()

virtual	~ShapePriorMAPCostFunctionBase ()

Protected Member Functions inherited from itk::SingleValuedCostFunction
	SingleValuedCostFunction ()

virtual	~SingleValuedCostFunction ()

Protected Member Functions inherited from itk::CostFunctionTemplate< TInternalComputationValueType >
	CostFunctionTemplate ()

virtual	~CostFunctionTemplate ()

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object ()

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Member Functions
void	operator= (const Self &)

	ShapePriorMAPCostFunction (const Self &)

Private Attributes
GaussianKernelFunction< double > ::Pointer	m_GaussianFunction

ArrayType	m_ShapeParameterMeans

ArrayType	m_ShapeParameterStandardDeviations

WeightsType	m_Weights

typedef FixedArray< double, 4 >	WeightsType

virtual void	SetWeights (WeightsType _arg)

virtual const WeightsType &	GetWeights () const

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType

Protected Attributes inherited from itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >
NodeContainerPointer	m_ActiveRegion

FeatureImagePointer	m_FeatureImage

ShapeFunctionPointer	m_ShapeFunction

Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount

SimpleFastMutexLock	m_ReferenceCountLock