#include <itkShapePriorMAPCostFunctionBase.h>

Inheritance diagram for itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >:

Collaboration diagram for itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >:

Detailed Description

template<typename TFeatureImage, typename TOutputPixel>
class itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >

Represents the base class of maximum aprior (MAP) cost function used ShapePriorSegmentationLevelSetImageFilter to estimate the shape paramaeters.

This class follows the shape and pose parameters estimation developed in [1].

This class has two template parameters, the feature image type representing the edge potential map and the pixel type used to represent the output level set in the ShapePriorSegmentationLevelSetImageFilter.

See Also: ShapePriorSegmentationLevelSetImageFilter

REFERENCES

: [1] Leventon, M.E. et al. "Statistical Shape Influence in Geodesic Active Contours", CVPR 2000.

Definition at line 48 of file itkShapePriorMAPCostFunctionBase.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef FeatureImageType::ConstPointer	FeatureImagePointer

typedef TFeatureImage	FeatureImageType

typedef Superclass::MeasureType	MeasureType

typedef NodeContainerType::ConstPointer	NodeContainerPointer

typedef VectorContainer < unsigned int, NodeType >	NodeContainerType

typedef LevelSetNode < PixelType, itkGetStaticConstMacro(ImageDimension) >	NodeType

typedef Superclass::ParametersType	ParametersType

typedef TOutputPixel	PixelType

typedef SmartPointer< Self >	Pointer

typedef ShapePriorMAPCostFunctionBase	Self

typedef ShapeFunctionType::Pointer	ShapeFunctionPointer

typedef ShapeSignedDistanceFunction < double, itkGetStaticConstMacro(ImageDimension) >	ShapeFunctionType

typedef SingleValuedCostFunction	Superclass

Public Types inherited from itk::SingleValuedCostFunction
typedef SmartPointer< const Self >	ConstPointer

typedef Array < ParametersValueType >	DerivativeType

typedef double	MeasureType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef SingleValuedCostFunction	Self

typedef CostFunction	Superclass

Public Types inherited from itk::CostFunctionTemplate< TInternalComputationValueType >
typedef SmartPointer< const Self >	ConstPointer

typedef OptimizerParameters < TInternalComputationValueType >	ParametersType

typedef TInternalComputationValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef CostFunctionTemplate	Self

typedef Object	Superclass

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual MeasureType	ComputeLogGradientTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogInsideTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogPosePriorTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogShapePriorTerm (const ParametersType &) const =0

virtual void	GetDerivative (const ParametersType &, DerivativeType &) const ITK_OVERRIDE

virtual const char *	GetNameOfClass () const

virtual unsigned int	GetNumberOfParameters (void) const ITK_OVERRIDE

virtual MeasureType	GetValue (const ParametersType &parameters) const ITK_OVERRIDE

virtual void	Initialize (void) throw ( ExceptionObject )


virtual void	SetShapeFunction (ShapeFunctionType *_arg)

virtual ShapeFunctionType *	GetModifiableShapeFunction ()

virtual const ShapeFunctionType *	GetShapeFunction () const


virtual void	SetActiveRegion (const NodeContainerType *_arg)

virtual const NodeContainerType *	GetActiveRegion () const


virtual void	SetFeatureImage (const FeatureImageType *_arg)

virtual const FeatureImageType *	GetFeatureImage () const

Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual LightObject::Pointer	CreateAnother () const ITK_OVERRIDE

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary (void)

const MetaDataDictionary &	GetMetaDataDictionary (void) const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const ITK_OVERRIDE

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) ITK_OVERRIDE

virtual void	UnRegister () const ITK_OVERRIDE

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Static Public Attributes
static const unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
virtual void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE

	ShapePriorMAPCostFunctionBase ()

virtual	~ShapePriorMAPCostFunctionBase ()

Protected Member Functions inherited from itk::SingleValuedCostFunction
	SingleValuedCostFunction ()

virtual	~SingleValuedCostFunction ()

Protected Member Functions inherited from itk::CostFunctionTemplate< TInternalComputationValueType >
	CostFunctionTemplate ()

virtual	~CostFunctionTemplate ()

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object ()

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Protected Attributes
NodeContainerPointer	m_ActiveRegion

FeatureImagePointer	m_FeatureImage

ShapeFunctionPointer	m_ShapeFunction

Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount

SimpleFastMutexLock	m_ReferenceCountLock

Private Member Functions
void	operator= (const Self &)

	ShapePriorMAPCostFunctionBase (const Self &)

Additional Inherited Members
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType

Member Typedef Documentation

template<typename TFeatureImage , typename TOutputPixel >

typedef SmartPointer< const Self > itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ConstPointer

Definition at line 56 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef Superclass::DerivativeType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::DerivativeType

DerivativeType typedef. It defines a type used to return the cost function derivative.

Definition at line 67 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef FeatureImageType::ConstPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::FeatureImagePointer

Definition at line 75 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef TFeatureImage itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::FeatureImageType

Type of the feature image representing the edge potential map.

Definition at line 74 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef Superclass::MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::MeasureType

MeasureType typedef. It defines a type used to return the cost function value.

Definition at line 59 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef NodeContainerType::ConstPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeContainerPointer

Definition at line 88 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef VectorContainer< unsigned int, NodeType > itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeContainerType

Type of container used to store the level set nodes.

Definition at line 87 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef LevelSetNode< PixelType, itkGetStaticConstMacro(ImageDimension) > itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeType

Type of node used to represent the active region around the zero set.

Definition at line 84 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef Superclass::ParametersType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ParametersType

ParametersType typedef. It defines a position in the optimization search space.

Definition at line 71 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef TOutputPixel itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::PixelType

Type of pixel used to represent the level set.

Definition at line 81 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef SmartPointer< Self > itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Pointer

Definition at line 55 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef ShapePriorMAPCostFunctionBase itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Self

Standard class typedefs.

Definition at line 53 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef ShapeFunctionType::Pointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapeFunctionPointer

Definition at line 93 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef ShapeSignedDistanceFunction< double, itkGetStaticConstMacro(ImageDimension) > itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapeFunctionType

Type of the shape signed distance function.

Definition at line 92 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

typedef SingleValuedCostFunction itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Superclass

Definition at line 54 of file itkShapePriorMAPCostFunctionBase.h.

Constructor & Destructor Documentation

template<typename TFeatureImage , typename TOutputPixel >

itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapePriorMAPCostFunctionBase ( )

protected

template<typename TFeatureImage , typename TOutputPixel >

virtual itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::~ShapePriorMAPCostFunctionBase ( )

inlineprotectedvirtual

Definition at line 146 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapePriorMAPCostFunctionBase ( const Self & )

private

Member Function Documentation

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogGradientTerm ( const ParametersType & ) const

pure virtual

Compute the gradient term component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogInsideTerm ( const ParametersType & ) const

pure virtual

Compute the inside term component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogPosePriorTerm ( const ParametersType & ) const

pure virtual

Compute the pose prior component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogShapePriorTerm ( const ParametersType & ) const

pure virtual

Compute the shape prior component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

virtual const NodeContainerType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetActiveRegion ( ) const

virtual

Set/Get the active region.

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetDerivative	(	const ParametersType &	,
		DerivativeType &
	)		const

inlinevirtual

This method returns the derivative of the cost function corresponding to the specified parameters.

Implements itk::SingleValuedCostFunction.

Definition at line 116 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

virtual const FeatureImageType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetFeatureImage ( ) const

virtual

Set/Get the feature image.

template<typename TFeatureImage , typename TOutputPixel >

virtual ShapeFunctionType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetModifiableShapeFunction ( )

virtual

Set/Get the shape distance function.

template<typename TFeatureImage , typename TOutputPixel >

virtual const char* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::SingleValuedCostFunction.

Reimplemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

virtual unsigned int itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetNumberOfParameters ( void ) const

inlinevirtual

Return the number of parameters.

Implements itk::CostFunctionTemplate< TInternalComputationValueType >.

Definition at line 120 of file itkShapePriorMAPCostFunctionBase.h.

References itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ShapeFunction.

template<typename TFeatureImage , typename TOutputPixel >

virtual const ShapeFunctionType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetShapeFunction ( ) const

virtual

Set/Get the shape distance function.

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetValue ( const ParametersType & parameters ) const

virtual

This method returns the value of the cost function corresponding to the specified parameters.

Implements itk::SingleValuedCostFunction.

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Initialize	(	void	)
throw	(	ExceptionObject
	)

virtual

Initialize the cost function by making sure that all the components are present.

Reimplemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::operator= ( const Self & )

private

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::CostFunctionTemplate< TInternalComputationValueType >.

Reimplemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetActiveRegion ( const NodeContainerType * _arg )

virtual

Set/Get the active region.

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetFeatureImage ( const FeatureImageType * _arg )

virtual

Set/Get the feature image.

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetShapeFunction ( ShapeFunctionType * _arg )

virtual

Set/Get the shape distance function.

Member Data Documentation

template<typename TFeatureImage , typename TOutputPixel >

const unsigned int itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ImageDimension = TFeatureImage::ImageDimension

static

Dimension constant.

Definition at line 78 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

NodeContainerPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ActiveRegion

protected

Definition at line 151 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

FeatureImagePointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_FeatureImage

protected

Definition at line 153 of file itkShapePriorMAPCostFunctionBase.h.

template<typename TFeatureImage , typename TOutputPixel >

ShapeFunctionPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ShapeFunction

protected

Definition at line 150 of file itkShapePriorMAPCostFunctionBase.h.

Referenced by itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetNumberOfParameters().

The documentation for this class was generated from the following file:

itkShapePriorMAPCostFunctionBase.h

Detailed Description

template<typename TFeatureImage, typename TOutputPixel> class itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >

Public Types

Public Member Functions

Static Public Attributes

Protected Member Functions

Protected Attributes

Private Member Functions

Additional Inherited Members

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename TFeatureImage, typename TOutputPixel>
class itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >