#include <itkCompositeTransform.h>

Inheritance diagram for itk::CompositeTransform< TParametersValueType, NDimensions >:

Collaboration diagram for itk::CompositeTransform< TParametersValueType, NDimensions >:

Detailed Description

template<typename TParametersValueType = double, unsigned int NDimensions = 3>
class itk::CompositeTransform< TParametersValueType, NDimensions >

This class contains a list of transforms and concatenates them by composition.

This class concatenates transforms in reverse queue order by means of composition: $ T_0 o T_1 = T_0(T_1(x)) $ Transforms are stored in a container (queue), in the following order: $ T_0, T_1, ... , T_N-1 $ Transforms are added via a single method, AddTransform(). This adds the transforms to the back of the queue. A single method for adding transforms is meant to simplify the interface and prevent errors. One use of the class is to optimize only a subset of included transforms.

The sub transforms are the same dimensionality as this class.

Example: A user wants to optimize two Affine transforms together, then add a Deformation Field (DF) transform, and optimize it separately. He first adds the two Affines, then runs the optimization and both Affines transforms are optimized. Next, he adds the DF transform and calls SetOnlyMostRecentTransformToOptimizeOn, which clears the optimization flags for both of the affine transforms, and leaves the flag set only for the DF transform, since it was the last transform added. Now he runs the optimization and only the DF transform is optimized, but the affines are included in the transformation during the optimization.

Optimization Flags: The m_TransformsToOptimize flags hold one flag for each transform in the queue, designating if each transform is to be used for optimization. Note that all transforms in the queue are applied in TransformPoint, regardless of these flags states'. The methods GetParameters, SetParameters, ComputeJacobianWithRespectToParameters, GetTransformCategory, GetFixedParameters, and SetFixedParameters all query these flags and include only those transforms whose corresponding flag is set. Their input or output is a concatenated array of all transforms set for use in optimization. The goal is to be able to optimize multiple transforms at once, while leaving other transforms fixed. See the above example.

Setting Optimization Flags: A transform's optimization flag is set when it is added to the queue, and remains set as other transforms are added. The methods SetNthTransformToOptimize* and SetAllTransformToOptimize* are used to set and clear flags arbitrarily. SetOnlyMostRecentTransformToOptimizeOn is a convenience method for setting only the most recently added transform for optimization, with the idea that this will be a common practice.

Indexing: The index values used in GetNthTransform and SetNthTransformToOptimize* and SetAllTransformToOptimize* follow the order in which transforms were added. Thus, the first transform added is at index 0, the next at index 1, etc.

Inverse: The inverse transform is created by retrieving the inverse from each sub transform and adding them to a composite transform in reverse order. The m_TransformsToOptimizeFlags is copied in reverse for the inverse.

Examples:: Examples/IO/TransformReadWrite.cxx, Examples/RegistrationITKv4/ImageRegistration1.cxx, Examples/RegistrationITKv4/MultiStageImageRegistration1.cxx, Examples/RegistrationITKv4/MultiStageImageRegistration2.cxx, SphinxExamples/src/Core/Transform/CopyACompositeTransform/Code.cxx, and SphinxExamples/src/Registration/Common/Perform2DTranslationRegistrationWithMeanSquares/Code.cxx.

Definition at line 87 of file itkCompositeTransform.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef Superclass::FixedParametersType	FixedParametersType

typedef Superclass::FixedParametersValueType	FixedParametersValueType

typedef Superclass::InputCovariantVectorType	InputCovariantVectorType

typedef Superclass::InputDiffusionTensor3DType	InputDiffusionTensor3DType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InputSymmetricSecondRankTensorType	InputSymmetricSecondRankTensorType

typedef Superclass::InputVectorPixelType	InputVectorPixelType

typedef Superclass::InputVectorType	InputVectorType

typedef Superclass::InputVnlVectorType	InputVnlVectorType

typedef Superclass::InverseTransformBasePointer	InverseTransformBasePointer

typedef Superclass::JacobianType	JacobianType

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType

typedef Superclass::OutputDiffusionTensor3DType	OutputDiffusionTensor3DType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::OutputSymmetricSecondRankTensorType	OutputSymmetricSecondRankTensorType

typedef Superclass::OutputVectorPixelType	OutputVectorPixelType

typedef Superclass::OutputVectorType	OutputVectorType

typedef Superclass::OutputVnlVectorType	OutputVnlVectorType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef Superclass::ScalarType	ScalarType

typedef CompositeTransform	Self

typedef MultiTransform < TParametersValueType, NDimensions, NDimensions >	Superclass

typedef Superclass::TransformCategoryType	TransformCategoryType

typedef Superclass::TransformQueueType	TransformQueueType

typedef std::deque< bool >	TransformsToOptimizeFlagsType

typedef Superclass::TransformType	TransformType

typedef Superclass::TransformTypePointer	TransformTypePointer

Public Types inherited from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef Superclass::FixedParametersType	FixedParametersType

typedef Superclass::FixedParametersValueType	FixedParametersValueType

typedef Superclass::InputCovariantVectorType	InputCovariantVectorType

typedef Superclass::InputDiffusionTensor3DType	InputDiffusionTensor3DType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InputSymmetricSecondRankTensorType	InputSymmetricSecondRankTensorType

typedef Superclass::InputVectorPixelType	InputVectorPixelType

typedef Superclass::InputVectorType	InputVectorType

typedef Superclass::InputVnlVectorType	InputVnlVectorType

typedef Superclass::InverseTransformBasePointer	InverseTransformBasePointer

typedef Superclass::JacobianType	JacobianType

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType

typedef Superclass::OutputDiffusionTensor3DType	OutputDiffusionTensor3DType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::OutputSymmetricSecondRankTensorType	OutputSymmetricSecondRankTensorType

typedef Superclass::OutputVectorPixelType	OutputVectorPixelType

typedef Superclass::OutputVectorType	OutputVectorType

typedef Superclass::OutputVnlVectorType	OutputVnlVectorType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef ParametersValueType	ScalarType

typedef MultiTransform	Self

typedef TransformType::InverseTransformBasePointer	SubTransformInverseTransformBasePointer

typedef Transform < TParametersValueType, NDimensions, NSubDimensions >	Superclass

typedef Superclass::TransformCategoryType	TransformCategoryType

typedef std::deque < TransformTypePointer >	TransformQueueType

typedef Transform < TParametersValueType, NSubDimensions, NSubDimensions >	TransformType

typedef TransformType::Pointer	TransformTypePointer

Public Types inherited from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >
typedef SmartPointer< const Self >	ConstPointer

typedef Array < ParametersValueType >	DerivativeType

typedef Matrix< double, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension)>	DirectionChangeMatrix

typedef Superclass::FixedParametersType	FixedParametersType

typedef Superclass::FixedParametersValueType	FixedParametersValueType

typedef CovariantVector < TParametersValueType, NInputDimensions >	InputCovariantVectorType

typedef DiffusionTensor3D < TParametersValueType >	InputDiffusionTensor3DType

typedef Matrix< double, itkGetStaticConstMacro(InputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension)>	InputDirectionMatrix

typedef Point < TParametersValueType, NInputDimensions >	InputPointType

typedef SymmetricSecondRankTensor < TParametersValueType, NInputDimensions >	InputSymmetricSecondRankTensorType

typedef VariableLengthVector < TParametersValueType >	InputVectorPixelType

typedef Vector < TParametersValueType, NInputDimensions >	InputVectorType

typedef vnl_vector_fixed < TParametersValueType, NInputDimensions >	InputVnlVectorType

typedef InverseTransformBaseType::Pointer	InverseTransformBasePointer

typedef Transform < TParametersValueType, NOutputDimensions, NInputDimensions >	InverseTransformBaseType

typedef Array2D < ParametersValueType >	JacobianType

typedef Matrix < TParametersValueType, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension)>	MatrixType

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef CovariantVector < TParametersValueType, NOutputDimensions >	OutputCovariantVectorType

typedef DiffusionTensor3D < TParametersValueType >	OutputDiffusionTensor3DType

typedef Matrix< double, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(OutputSpaceDimension)>	OutputDirectionMatrix

typedef Point < TParametersValueType, NOutputDimensions >	OutputPointType

typedef SymmetricSecondRankTensor < TParametersValueType, NOutputDimensions >	OutputSymmetricSecondRankTensorType

typedef VariableLengthVector < TParametersValueType >	OutputVectorPixelType

typedef Vector < TParametersValueType, NOutputDimensions >	OutputVectorType

typedef vnl_vector_fixed < TParametersValueType, NOutputDimensions >	OutputVnlVectorType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef ParametersValueType	ScalarType

typedef Transform	Self

typedef TransformBaseTemplate < TParametersValueType >	Superclass

typedef Superclass::TransformCategoryType	TransformCategoryType

Public Types inherited from itk::TransformBaseTemplate< TParametersValueType >
typedef SmartPointer< const Self >	ConstPointer

typedef OptimizerParameters < FixedParametersValueType >	FixedParametersType

typedef double	FixedParametersValueType

typedef IdentifierType	NumberOfParametersType

typedef OptimizerParameters < ParametersValueType >	ParametersType

typedef TParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef TransformBaseTemplate	Self

typedef Object	Superclass

enum	TransformCategoryType { UnknownTransformCategory =0, Linear =1, BSpline =2, Spline =3, DisplacementField =4, VelocityField =5 }

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual void	ClearTransformQueue () override

virtual void	ComputeJacobianWithRespectToParameters (const InputPointType &p, JacobianType &j) const override

virtual ::itk::LightObject::Pointer	CreateAnother () const

virtual void	FlattenTransformQueue ()

virtual const FixedParametersType &	GetFixedParameters () const override

bool	GetInverse (Self *inverse) const

virtual InverseTransformBasePointer	GetInverseTransform () const override

virtual const char *	GetNameOfClass () const

virtual bool	GetNthTransformToOptimize (SizeValueType i) const

virtual NumberOfParametersType	GetNumberOfFixedParameters (void) const override

virtual NumberOfParametersType	GetNumberOfLocalParameters (void) const override

virtual NumberOfParametersType	GetNumberOfParameters (void) const override

virtual const ParametersType &	GetParameters () const override

virtual TransformCategoryType	GetTransformCategory () const override

virtual const TransformsToOptimizeFlagsType &	GetTransformsToOptimizeFlags () const

virtual void	SetAllTransformsToOptimize (bool state)

virtual void	SetAllTransformsToOptimizeOff ()

virtual void	SetAllTransformsToOptimizeOn ()

virtual void	SetFixedParameters (const FixedParametersType &fixedParameters) override

virtual void	SetNthTransformToOptimize (SizeValueType i, bool state)

virtual void	SetNthTransformToOptimizeOff (SizeValueType i)

virtual void	SetNthTransformToOptimizeOn (SizeValueType i)

virtual void	SetOnlyMostRecentTransformToOptimizeOn ()

virtual void	SetParameters (const ParametersType &p) override

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const override

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &) const override

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &inputVector, const InputPointType &inputPoint) const override

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &inputVector, const InputPointType &inputPoint) const override

virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &inputTensor) const override

virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &inputTensor) const override

virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &inputTensor, const InputPointType &inputPoint) const override

virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &inputTensor, const InputPointType &inputPoint) const override

virtual OutputPointType	TransformPoint (const InputPointType &inputPoint) const override

virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &inputTensor) const override

virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &inputTensor) const override

virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &inputTensor, const InputPointType &inputPoint) const override

virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &inputTensor, const InputPointType &inputPoint) const override

virtual OutputVectorType	TransformVector (const InputVectorType &) const override

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &inputVector) const override

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &inputVector) const override

virtual OutputVectorType	TransformVector (const InputVectorType &inputVector, const InputPointType &inputPoint) const override

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &inputVector, const InputPointType &inputPoint) const override

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &inputVector, const InputPointType &inputPoint) const override

virtual void	UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override


virtual void	ComputeJacobianWithRespectToParametersCachedTemporaries (const InputPointType &p, JacobianType &outJacobian, JacobianType &jacobianWithRespectToPosition) const override

Public Member Functions inherited from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >
virtual void	AddTransform (TransformType *t)

virtual void	AppendTransform (TransformType *t)

virtual const TransformType *	GetBackTransform () const

virtual const TransformType *	GetFrontTransform () const

bool	GetInverse (Self *inverse) const

virtual const TransformTypePointer	GetNthTransform (SizeValueType n) const

virtual const TransformType *	GetNthTransformConstPointer (const SizeValueType n) const

virtual TransformType *	GetNthTransformModifiablePointer (const SizeValueType n) const

virtual SizeValueType	GetNumberOfTransforms () const

virtual const TransformQueueType &	GetTransformQueue () const

virtual bool	IsLinear () const override

virtual bool	IsTransformQueueEmpty () const

virtual void	PrependTransform (TransformType *t)

virtual void	RemoveTransform ()

virtual void	SetFixedParameters (const FixedParametersType &fixedParameters) override

virtual void	SetParameters (const ParametersType &p) override

virtual void	UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override

Public Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >
virtual void	ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &jacobian) const

virtual void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const =0

virtual void	ComputeJacobianWithRespectToParametersCachedTemporaries (const InputPointType &p, JacobianType &jacobian, JacobianType &) const

virtual void	ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianType &) const

virtual void	CopyInFixedParameters (const FixedParametersValueType const begin, const FixedParametersValueType const end) override

virtual void	CopyInParameters (const ParametersValueType const begin, const ParametersValueType const end) override

unsigned int	GetInputSpaceDimension (void) const override

bool	GetInverse (Self *) const

unsigned int	GetOutputSpaceDimension (void) const override

virtual std::string	GetTransformTypeAsString () const override

	itkCloneMacro (Self)

virtual void	SetParametersByValue (const ParametersType &p) override

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &vector, const InputPointType &point) const

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &vector, const InputPointType &point) const

virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &) const

virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &tensor, const InputPointType &point) const

virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &tensor, const InputPointType &point) const

virtual OutputPointType	TransformPoint (const InputPointType &) const =0

virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &tensor, const InputPointType &point) const

virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &) const

virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &tensor, const InputPointType &point) const

virtual OutputVectorType	TransformVector (const InputVectorType &) const

virtual OutputVectorType	TransformVector (const InputVectorType &vector, const InputPointType &point) const

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &vector, const InputPointType &point) const

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &vector, const InputPointType &point) const

virtual void	UpdateTransformParameters (const DerivativeType &update, ParametersValueType factor=1.0)

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) override

virtual void	UnRegister () const noexceptoverride

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes

static const unsigned int	InputDimension = NDimensions

static const unsigned int	OutputDimension = NDimensions

Static Public Attributes inherited from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >
static const unsigned int	SubInputDimension

static const unsigned int	SubOutputDimension

static const unsigned int	InputDimension

static const unsigned int	OutputDimension

Static Public Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >
static const unsigned int	InputSpaceDimension

static const unsigned int	OutputSpaceDimension

Protected Member Functions
	CompositeTransform ()

TransformQueueType &	GetTransformsToOptimizeQueue () const

virtual LightObject::Pointer	InternalClone () const override

virtual void	PopBackTransform () override

virtual void	PopFrontTransform () override

virtual void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	PushBackTransform (TransformTypePointer t) override

virtual void	PushFrontTransform (TransformTypePointer t) override

virtual	~CompositeTransform ()

Protected Member Functions inherited from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >
	MultiTransform ()

virtual	~MultiTransform ()

Protected Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >
OutputDiffusionTensor3DType	PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType, const JacobianType) const

	Transform ()

	Transform (NumberOfParametersType NumberOfParameters)

virtual	~Transform ()

Protected Member Functions inherited from itk::TransformBaseTemplate< TParametersValueType >
	TransformBaseTemplate ()

virtual	~TransformBaseTemplate ()

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object ()

Protected Member Functions inherited from itk::LightObject
	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Protected Attributes
TransformsToOptimizeFlagsType	m_TransformsToOptimizeFlags

TransformQueueType	m_TransformsToOptimizeQueue

Protected Attributes inherited from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >
ModifiedTimeType	m_LocalParametersUpdateTime

NumberOfParametersType	m_NumberOfLocalParameters

TransformQueueType	m_TransformQueue

Protected Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >
DirectionChangeMatrix	m_DirectionChange

FixedParametersType	m_FixedParameters

ParametersType	m_Parameters

Protected Attributes inherited from itk::LightObject
AtomicInt< int >	m_ReferenceCount

Private Member Functions
	CompositeTransform (const Self &) ITK_DELETE_FUNCTION

void	operator= (const Self &) ITK_DELETE_FUNCTION

Private Attributes
ModifiedTimeType	m_PreviousTransformsToOptimizeUpdateTime

Member Typedef Documentation

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef SmartPointer<const Self> itk::CompositeTransform< TParametersValueType, NDimensions >::ConstPointer

Definition at line 95 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::DerivativeType itk::CompositeTransform< TParametersValueType, NDimensions >::DerivativeType

Derivative type

Definition at line 120 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::FixedParametersType itk::CompositeTransform< TParametersValueType, NDimensions >::FixedParametersType

Parameters type.

Definition at line 114 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::FixedParametersValueType itk::CompositeTransform< TParametersValueType, NDimensions >::FixedParametersValueType

Definition at line 115 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputCovariantVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::InputCovariantVectorType

Standard covariant vector type for this class

Definition at line 137 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputDiffusionTensor3DType itk::CompositeTransform< TParametersValueType, NDimensions >::InputDiffusionTensor3DType

Standard DiffusionTensor3D typedef for this class

Definition at line 149 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputPointType itk::CompositeTransform< TParametersValueType, NDimensions >::InputPointType

Standard coordinate point type for this class.

Definition at line 129 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputSymmetricSecondRankTensorType itk::CompositeTransform< TParametersValueType, NDimensions >::InputSymmetricSecondRankTensorType

Standard SymmetricSecondRankTensor typedef for this class

Definition at line 153 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::InputVectorPixelType

Standard Vectorpixel type for this class

Definition at line 145 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::InputVectorType

Standard vector type for this class.

Definition at line 133 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InputVnlVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::InputVnlVectorType

Standard vnl_vector type for this class.

Definition at line 141 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::InverseTransformBasePointer itk::CompositeTransform< TParametersValueType, NDimensions >::InverseTransformBasePointer

InverseTransform type.

Definition at line 108 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::JacobianType itk::CompositeTransform< TParametersValueType, NDimensions >::JacobianType

Jacobian type.

Definition at line 123 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::NumberOfParametersType itk::CompositeTransform< TParametersValueType, NDimensions >::NumberOfParametersType

The number of parameters defininig this transform.

Definition at line 160 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputCovariantVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputCovariantVectorType

Definition at line 138 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputDiffusionTensor3DType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputDiffusionTensor3DType

Definition at line 150 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputPointType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputPointType

Definition at line 130 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputSymmetricSecondRankTensorType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputSymmetricSecondRankTensorType

Definition at line 154 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputVectorPixelType

Definition at line 146 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputVectorType

Definition at line 134 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::OutputVnlVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::OutputVnlVectorType

Definition at line 142 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::ParametersType itk::CompositeTransform< TParametersValueType, NDimensions >::ParametersType

Definition at line 116 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::ParametersValueType itk::CompositeTransform< TParametersValueType, NDimensions >::ParametersValueType

Definition at line 117 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef SmartPointer<Self> itk::CompositeTransform< TParametersValueType, NDimensions >::Pointer

Definition at line 94 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::ScalarType itk::CompositeTransform< TParametersValueType, NDimensions >::ScalarType

Scalar type.

Definition at line 111 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef CompositeTransform itk::CompositeTransform< TParametersValueType, NDimensions >::Self

Standard class typedefs.

Definition at line 92 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef MultiTransform<TParametersValueType, NDimensions, NDimensions> itk::CompositeTransform< TParametersValueType, NDimensions >::Superclass

Definition at line 93 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::TransformCategoryType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformCategoryType

Transform category type.

Definition at line 126 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::TransformQueueType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformQueueType

Transform queue type

Definition at line 157 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef std::deque<bool> itk::CompositeTransform< TParametersValueType, NDimensions >::TransformsToOptimizeFlagsType

Optimization flags queue type

Definition at line 163 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::TransformType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformType

Sub transform type

Definition at line 101 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

typedef Superclass::TransformTypePointer itk::CompositeTransform< TParametersValueType, NDimensions >::TransformTypePointer

Definition at line 105 of file itkCompositeTransform.h.

Constructor & Destructor Documentation

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

itk::CompositeTransform< TParametersValueType, NDimensions >::CompositeTransform ( )

protected

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual itk::CompositeTransform< TParametersValueType, NDimensions >::~CompositeTransform ( )

protectedvirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

itk::CompositeTransform< TParametersValueType, NDimensions >::CompositeTransform ( const Self & )

private

Member Function Documentation

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::ClearTransformQueue ( )

inlineoverridevirtual

Clear the transform queue.

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

Definition at line 229 of file itkCompositeTransform.h.

References itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >::ClearTransformQueue(), and itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::ComputeJacobianWithRespectToParameters	(	const InputPointType &	p,
		JacobianType &	j
	)		const

overridevirtual

Compute the Jacobian with respect to the parameters for the compositie transform using Jacobian rule. See comments in the implementation.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::ComputeJacobianWithRespectToParametersCachedTemporaries	(	const InputPointType &	p,
		JacobianType &	outJacobian,
		JacobianType &	jacobianWithRespectToPosition
	)		const

overridevirtual

Expanded interface to Compute the Jacobian with respect to the parameters for the compositie transform using Jacobian rule. This version takes in temporary variables to avoid excessive constructions. NOTE: outJacobian and jacobianWithRespectToPosition MUST be sized prior to the call; outJacobian's size should be [NDimensions, this->GetNumberOfLocalParameters() ] jacobianWithRespectToPosition size == [ NDimensions, NDimensions ]

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual::itk::LightObject::Pointer itk::CompositeTransform< TParametersValueType, NDimensions >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::FlattenTransformQueue ( )

virtual

Flatten the transform queue such that there are no nested composite transforms.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual const FixedParametersType& itk::CompositeTransform< TParametersValueType, NDimensions >::GetFixedParameters ( void ) const

overridevirtual

Get the Fixed Parameters.

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

bool itk::CompositeTransform< TParametersValueType, NDimensions >::GetInverse ( Self * inverse ) const

Returns a boolean indicating whether it is possible or not to compute the inverse of this current Transform. If it is possible, then the inverse of the transform is returned in the inverseTransform variable passed by the user. The inverse consists of the inverse of each sub-transform, in the reverse order of the forward transforms.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual InverseTransformBasePointer itk::CompositeTransform< TParametersValueType, NDimensions >::GetInverseTransform ( ) const

overridevirtual

Return an inverse of this transform. If the inverse has not been implemented, return ITK_NULLPTR. The type of the inverse transform does not necessarily need to match the type of the forward transform. This allows one to return a numeric inverse transform instead.

Reimplemented from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual const char* itk::CompositeTransform< TParametersValueType, NDimensions >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual bool itk::CompositeTransform< TParametersValueType, NDimensions >::GetNthTransformToOptimize ( SizeValueType i ) const

inlinevirtual

Definition at line 218 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual NumberOfParametersType itk::CompositeTransform< TParametersValueType, NDimensions >::GetNumberOfFixedParameters ( void ) const

overridevirtual

Return the number of parameters that define the constant elements of a Transfom

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual NumberOfParametersType itk::CompositeTransform< TParametersValueType, NDimensions >::GetNumberOfLocalParameters ( void ) const

overridevirtual

Return the number of local parameters that completely defines the Transform at an individual voxel. For transforms with local support, this will enable downstream computation of the jacobian wrt only the local support region. For instance, in the case of a deformation field, this will be equal to the number of image dimensions. If it is an affine transform, this will be the same as the GetNumberOfParameters().

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual NumberOfParametersType itk::CompositeTransform< TParametersValueType, NDimensions >::GetNumberOfParameters ( void ) const

overridevirtual

Return the number of parameters that completely define the Transfom

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual const ParametersType& itk::CompositeTransform< TParametersValueType, NDimensions >::GetParameters ( ) const

overridevirtual

Get/Set Parameter functions work on the current list of transforms that are set to be optimized (active) using the 'Set[Nth|All]TransformToOptimze' routines. The parameter data from each active transform is concatenated into a single ParametersType object.

Note: The sub-transforms are read in reverse queue order, so the returned array is ordered in the same way. That is, the last sub-transform to be added is returned first in the parameter array. This is the opposite of what's done in the parent MultiTransform class.

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual TransformCategoryType itk::CompositeTransform< TParametersValueType, NDimensions >::GetTransformCategory ( ) const

overridevirtual

Special handling for composite transform. If all transforms are linear, then return category Linear. Otherwise if all transforms set to optimize are DisplacementFields, then return DisplacementField category.

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual const TransformsToOptimizeFlagsType& itk::CompositeTransform< TParametersValueType, NDimensions >::GetTransformsToOptimizeFlags ( ) const

inlinevirtual

Access optimize flags

Definition at line 224 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

TransformQueueType& itk::CompositeTransform< TParametersValueType, NDimensions >::GetTransformsToOptimizeQueue ( ) const

protected

Get a list of transforms to optimize. Helper function.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual LightObject::Pointer itk::CompositeTransform< TParametersValueType, NDimensions >::InternalClone ( ) const

overrideprotectedvirtual

Clone the current transform

Reimplemented from itk::Transform< TParametersValueType, NDimensions, NSubDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

static Pointer itk::CompositeTransform< TParametersValueType, NDimensions >::New ( )

static

New macro for creation of through a Smart Pointer

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

void itk::CompositeTransform< TParametersValueType, NDimensions >::operator= ( const Self & )

private

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::PopBackTransform ( )

inlineoverrideprotectedvirtual

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

Definition at line 418 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags, and itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >::PopBackTransform().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::PopFrontTransform ( )

inlineoverrideprotectedvirtual

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

Definition at line 412 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags, and itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >::PopFrontTransform().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::PushBackTransform ( TransformTypePointer t )

inlineoverrideprotectedvirtual

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

Definition at line 405 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags, and itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >::PushBackTransform().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::PushFrontTransform ( TransformTypePointer t )

inlineoverrideprotectedvirtual

Reimplemented from itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >.

Definition at line 398 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags, and itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >::PushFrontTransform().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimize ( bool state )

inlinevirtual

Definition at line 188 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags, and itk::Object::Modified().

Referenced by itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimizeOff(), itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimizeOn(), and itk::CompositeTransform< TParametersValueType, NDimensions >::SetOnlyMostRecentTransformToOptimizeOn().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimizeOff ( )

inlinevirtual

Definition at line 200 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimize().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimizeOn ( )

inlinevirtual

Definition at line 195 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimize().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetFixedParameters ( const FixedParametersType & fixedParameters )

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimize	(	SizeValueType	i,
		bool	state
	)

inlinevirtual

Active Transform state manipulation

Definition at line 172 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags, and itk::Object::Modified().

Referenced by itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimizeOff(), and itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimizeOn().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimizeOff ( SizeValueType i )

inlinevirtual

Definition at line 183 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimize().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimizeOn ( SizeValueType i )

inlinevirtual

Definition at line 178 of file itkCompositeTransform.h.

References itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimize().

Referenced by itk::CompositeTransform< TParametersValueType, NDimensions >::SetOnlyMostRecentTransformToOptimizeOn().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetOnlyMostRecentTransformToOptimizeOn ( )

inlinevirtual

Definition at line 208 of file itkCompositeTransform.h.

References itk::MultiTransform< TParametersValueType, NDimensions, NDimensions >::GetNumberOfTransforms(), itk::CompositeTransform< TParametersValueType, NDimensions >::SetAllTransformsToOptimize(), and itk::CompositeTransform< TParametersValueType, NDimensions >::SetNthTransformToOptimizeOn().

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::SetParameters ( const ParametersType & p )

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputCovariantVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformCovariantVector ( const InputCovariantVectorType & ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformCovariantVector ( const InputVectorPixelType & ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputCovariantVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformCovariantVector	(	const InputCovariantVectorType &	inputVector,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformCovariantVector	(	const InputVectorPixelType &	inputVector,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputDiffusionTensor3DType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformDiffusionTensor3D ( const InputDiffusionTensor3DType & inputTensor ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformDiffusionTensor3D ( const InputVectorPixelType & inputTensor ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputDiffusionTensor3DType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformDiffusionTensor3D	(	const InputDiffusionTensor3DType &	inputTensor,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformDiffusionTensor3D	(	const InputVectorPixelType &	inputTensor,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputPointType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformPoint ( const InputPointType & inputPoint ) const

overridevirtual

Compute the position of point in the new space.

Transforms are applied starting from the back of the queue. That is, in reverse order of which they were added, in order to work properly with ResampleFilter.

Imagine a user wants to apply an Affine transform followed by a Deformation Field (DF) transform. He adds the Affine, then the DF. Because the user typically conceptualizes a transformation as being applied from the Moving image to the Fixed image, this makes intuitive sense. But since the ResampleFilter expects to transform from the Fixed image to the Moving image, the transforms are applied in reverse order of addition, i.e. from the back of the queue, and thus, DF then Affine.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputSymmetricSecondRankTensorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformSymmetricSecondRankTensor ( const InputSymmetricSecondRankTensorType & inputTensor ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformSymmetricSecondRankTensor ( const InputVectorPixelType & inputTensor ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputSymmetricSecondRankTensorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformSymmetricSecondRankTensor	(	const InputSymmetricSecondRankTensorType &	inputTensor,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformSymmetricSecondRankTensor	(	const InputVectorPixelType &	inputTensor,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformVector ( const InputVectorType & ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVnlVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformVector ( const InputVnlVectorType & inputVector ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformVector ( const InputVectorPixelType & inputVector ) const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformVector	(	const InputVectorType &	inputVector,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVnlVectorType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformVector	(	const InputVnlVectorType &	inputVector,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual OutputVectorPixelType itk::CompositeTransform< TParametersValueType, NDimensions >::TransformVector	(	const InputVectorPixelType &	inputVector,
		const InputPointType &	inputPoint
	)		const

overridevirtual

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

virtual void itk::CompositeTransform< TParametersValueType, NDimensions >::UpdateTransformParameters	(	const DerivativeType &	update,
		ScalarType	factor = `1.0`
	)

overridevirtual

Update the transform's parameters by the values in update. See GetParameters() for parameter ordering.

Member Data Documentation

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

const unsigned int itk::CompositeTransform< TParametersValueType, NDimensions >::InputDimension = NDimensions

static

Dimension of the domain spaces.

Definition at line 166 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

ModifiedTimeType itk::CompositeTransform< TParametersValueType, NDimensions >::m_PreviousTransformsToOptimizeUpdateTime

mutableprivate

Definition at line 434 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

TransformsToOptimizeFlagsType itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeFlags

mutableprotected

Definition at line 428 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

TransformQueueType itk::CompositeTransform< TParametersValueType, NDimensions >::m_TransformsToOptimizeQueue

mutableprotected

Definition at line 427 of file itkCompositeTransform.h.

template<typename TParametersValueType = double, unsigned int NDimensions = 3>

const unsigned int itk::CompositeTransform< TParametersValueType, NDimensions >::OutputDimension = NDimensions

static

Dimension of the domain spaces.

Definition at line 167 of file itkCompositeTransform.h.

The documentation for this class was generated from the following file:

itkCompositeTransform.h

Detailed Description

template<typename TParametersValueType = double, unsigned int NDimensions = 3> class itk::CompositeTransform< TParametersValueType, NDimensions >

Public Types

Public Member Functions

Static Public Member Functions

Static Public Attributes

Protected Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename TParametersValueType = double, unsigned int NDimensions = 3>
class itk::CompositeTransform< TParametersValueType, NDimensions >