ITK  5.0.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Types | Private Attributes | List of all members
itk::LungWallFeatureGenerator< NDimension > Class Template Reference

#include <itkLungWallFeatureGenerator.h>

+ Inheritance diagram for itk::LungWallFeatureGenerator< NDimension >:
+ Collaboration diagram for itk::LungWallFeatureGenerator< NDimension >:

Detailed Description

template<unsigned int NDimension>
class itk::LungWallFeatureGenerator< NDimension >

Generates a feature image.

The typical use of this class would be to generate the feature image needed by a Level Set filter to internally compute its speed image. This transformation is very close to a simply thresholding selection on the input image, but with the advantage of a smooth transition of intensities.

SpatialObjects are used as inputs and outputs of this class.

Definition at line 43 of file itkLungWallFeatureGenerator.h.

Public Types

using ConstPointer = SmartPointer< const Self >
 
using InputImageSpatialObjectPointer = typename InputImageSpatialObjectType::Pointer
 
using InputImageSpatialObjectType = ImageSpatialObject< NDimension, InputPixelType >
 
using InputImageType = Image< InputPixelType, Dimension >
 
using InputPixelType = signed short
 
using Pointer = SmartPointer< Self >
 
using Self = LungWallFeatureGenerator
 
using SpatialObjectType = typename Superclass::SpatialObjectType
 
using Superclass = FeatureGenerator< NDimension >
 
- Public Types inherited from itk::FeatureGenerator< NDimension >
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = FeatureGenerator
 
using SpatialObjectPointer = typename SpatialObjectType::Pointer
 
using SpatialObjectType = SpatialObject< NDimension >
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
const SpatialObjectTypeGetFeature () const
 
virtual const char * GetNameOfClass () const
 
void SetInput (const SpatialObjectType *input)
 
const SpatialObjectTypeGetInput () const
 
virtual void SetLungThreshold (InputPixelType _arg)
 
virtual InputPixelType GetLungThreshold ()
 
- Public Member Functions inherited from itk::FeatureGenerator< NDimension >
const SpatialObjectTypeGetFeature () const
 
void SetInput (const SpatialObjectType *input)
 
const SpatialObjectTypeGetInput () const
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (DataObjectPointerArraySizeType idx)
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexceptoverride
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::FeatureGenerator< NDimension >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int Dimension = NDimension
 
- Static Public Attributes inherited from itk::FeatureGenerator< NDimension >
static constexpr unsigned int Dimension = NDimension
 

Protected Member Functions

void GenerateData () override
 
 LungWallFeatureGenerator ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 ~LungWallFeatureGenerator () override
 
- Protected Member Functions inherited from itk::FeatureGenerator< NDimension >
 FeatureGenerator ()
 
SpatialObjectTypeGetInternalFeature ()
 
 ~FeatureGenerator () override
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
virtual void PopBackInput ()
 
virtual void PopFrontInput ()
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PushFrontInput (const DataObject *input)
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyInputInformation () ITKv5_CONST
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Types

using InternalImageType = Image< InternalPixelType, Dimension >
 
using InternalPixelType = float
 
using OutputImageSpatialObjectType = ImageSpatialObject< NDimension, OutputPixelType >
 
using OutputImageType = Image< OutputPixelType, Dimension >
 
using OutputPixelType = float
 
using ThresholdFilterPointer = typename ThresholdFilterType::Pointer
 
using ThresholdFilterType = BinaryThresholdImageFilter< InputImageType, InternalImageType >
 
using VotingHoleFillingFilterPointer = typename VotingHoleFillingFilterType::Pointer
 
using VotingHoleFillingFilterType = VotingBinaryHoleFillFloodingImageFilter< InternalImageType, OutputImageType >
 

Private Attributes

InputPixelType m_LungThreshold
 
ThresholdFilterPointer m_ThresholdFilter
 
VotingHoleFillingFilterPointer m_VotingHoleFillingFilter
 

Additional Inherited Members

- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Member Typedef Documentation

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::ConstPointer = SmartPointer<const Self>

Definition at line 52 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::InputImageSpatialObjectPointer = typename InputImageSpatialObjectType::Pointer

Definition at line 68 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::InputImageSpatialObjectType = ImageSpatialObject< NDimension, InputPixelType >

Definition at line 67 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::InputImageType = Image< InputPixelType, Dimension >

Definition at line 66 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::InputPixelType = signed short

Type of spatialObject that will be passed as input to this feature generator.

Definition at line 65 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::InternalImageType = Image< InternalPixelType, Dimension >
private

Definition at line 97 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::InternalPixelType = float
private

Definition at line 96 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::OutputImageSpatialObjectType = ImageSpatialObject< NDimension, OutputPixelType >
private

Definition at line 102 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::OutputImageType = Image< OutputPixelType, Dimension >
private

Definition at line 100 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::OutputPixelType = float
private

Definition at line 99 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::Pointer = SmartPointer<Self>

Definition at line 51 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::Self = LungWallFeatureGenerator

Standard class type alias.

Definition at line 49 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::SpatialObjectType = typename Superclass::SpatialObjectType

Definition at line 69 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::Superclass = FeatureGenerator<NDimension>

Definition at line 50 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::ThresholdFilterPointer = typename ThresholdFilterType::Pointer
private

Definition at line 106 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::ThresholdFilterType = BinaryThresholdImageFilter< InputImageType, InternalImageType >
private

Definition at line 105 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
using itk::LungWallFeatureGenerator< NDimension >::VotingHoleFillingFilterPointer = typename VotingHoleFillingFilterType::Pointer
private

Definition at line 110 of file itkLungWallFeatureGenerator.h.

Definition at line 109 of file itkLungWallFeatureGenerator.h.

Constructor & Destructor Documentation

template<unsigned int NDimension>
itk::LungWallFeatureGenerator< NDimension >::LungWallFeatureGenerator ( )
protected
template<unsigned int NDimension>
itk::LungWallFeatureGenerator< NDimension >::~LungWallFeatureGenerator ( )
overrideprotected

Member Function Documentation

template<unsigned int NDimension>
virtual::itk::LightObject::Pointer itk::LungWallFeatureGenerator< NDimension >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::FeatureGenerator< NDimension >.

template<unsigned int NDimension>
void itk::LungWallFeatureGenerator< NDimension >::GenerateData ( )
overrideprotectedvirtual

Method invoked by the pipeline in order to trigger the computation of the segmentation.

Reimplemented from itk::ProcessObject.

template<unsigned int NDimension>
const SpatialObjectType* itk::LungWallFeatureGenerator< NDimension >::GetFeature ( ) const

Output data that carries the feature in the form of a SpatialObject.

template<unsigned int NDimension>
const SpatialObjectType* itk::LungWallFeatureGenerator< NDimension >::GetInput ( ) const
template<unsigned int NDimension>
virtual InputPixelType itk::LungWallFeatureGenerator< NDimension >::GetLungThreshold ( )
virtual

Set the Hounsfield Unit value to threshold the Lung.

template<unsigned int NDimension>
virtual const char* itk::LungWallFeatureGenerator< NDimension >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::FeatureGenerator< NDimension >.

template<unsigned int NDimension>
static Pointer itk::LungWallFeatureGenerator< NDimension >::New ( )
static

Method for creation through the object factory.

template<unsigned int NDimension>
void itk::LungWallFeatureGenerator< NDimension >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::FeatureGenerator< NDimension >.

template<unsigned int NDimension>
void itk::LungWallFeatureGenerator< NDimension >::SetInput ( const SpatialObjectType input)
template<unsigned int NDimension>
virtual void itk::LungWallFeatureGenerator< NDimension >::SetLungThreshold ( InputPixelType  _arg)
virtual

Set the Hounsfield Unit value to threshold the Lung.

Member Data Documentation

template<unsigned int NDimension>
constexpr unsigned int itk::LungWallFeatureGenerator< NDimension >::Dimension = NDimension
static

Dimension of the space

Definition at line 61 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
InputPixelType itk::LungWallFeatureGenerator< NDimension >::m_LungThreshold
private

Definition at line 115 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
ThresholdFilterPointer itk::LungWallFeatureGenerator< NDimension >::m_ThresholdFilter
private

Definition at line 112 of file itkLungWallFeatureGenerator.h.

template<unsigned int NDimension>
VotingHoleFillingFilterPointer itk::LungWallFeatureGenerator< NDimension >::m_VotingHoleFillingFilter
private

Definition at line 113 of file itkLungWallFeatureGenerator.h.


The documentation for this class was generated from the following file: