template<typename TInputImage, typename TFeatureImage, typename TOutputPixelType = float>
class itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
Segments structures in images based on intensity values.
- IMPORTANT
- The SegmentationLevelSetImageFilter class and the ThresholdSegmentationLevelSetFunction class contain additional information necessary to the full understanding of how to use this filter.
- OVERVIEW
- This class is a level set method segmentation filter. It constructs a speed function which is close to zero at the upper and lower bounds of an intensity window, effectively locking the propagating front onto those edges. Elsewhere, the front will propagate quickly.
- INPUTS
- This filter requires two inputs. The first input is a seed image. This seed image must contain an isosurface that you want to use as the seed for your segmentation. It can be a binary, graylevel, or floating point image. The only requirement is that it contain a closed isosurface that you will identify as the seed by setting the IsosurfaceValue parameter of the filter. For a binary image you will want to set your isosurface value halfway between your on and off values (i.e. for 0's and 1's, use an isosurface value of 0.5).
- The second input is the feature image. This is the image from which the speed function will be calculated. For most applications, this is the image that you want to segment. The desired isosurface in your seed image should lie within the region of your feature image that you are trying to segment. Note that this filter does no preprocessing of the feature image before thresholding.
- See SegmentationLevelSetImageFilter for more information on Inputs.
- OUTPUTS
- The filter outputs a single, scalar, real-valued image. Positive values in the output image are inside the segmentated region and negative values in the image are outside of the inside region. The zero crossings of the image correspond to the position of the level set front.
- See SparseFieldLevelSetImageFilter and SegmentationLevelSetImageFilter for more information.
- PARAMETERS
- In addition to parameters described in SegmentationLevelSetImageFilter, this filter adds the UpperThreshold and LowerThreshold. See ThresholdSegmentationLevelSetFunction for a description of how these values affect the segmentation.
- See Also
- SegmentationLevelSetImageFilter
-
ThresholdSegmentationLevelSetFunction,
-
SparseFieldLevelSetImageFilter
- Examples:
- Examples/Segmentation/ThresholdSegmentationLevelSetImageFilter.cxx.
Definition at line 86 of file itkThresholdSegmentationLevelSetImageFilter.h.
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using | ConstPointer = SmartPointer< const Self > |
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using | FeatureImageType = typename Superclass::FeatureImageType |
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using | OutputImageType = typename Superclass::OutputImageType |
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using | Pointer = SmartPointer< Self > |
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using | Self = ThresholdSegmentationLevelSetImageFilter |
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using | Superclass = SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType > |
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using | ThresholdFunctionPointer = typename ThresholdFunctionType::Pointer |
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using | ThresholdFunctionType = ThresholdSegmentationLevelSetFunction< OutputImageType, FeatureImageType > |
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using | ValueType = typename Superclass::ValueType |
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using | ConstPointer = SmartPointer< const Self > |
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using | FeatureImageType = TFeatureImage |
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using | IndexType = typename Superclass::IndexType |
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using | InputImageType = typename Superclass::InputImageType |
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using | OutputImageType = Image< TOutputPixelType, Self::InputImageDimension > |
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using | Pointer = SmartPointer< Self > |
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using | SegmentationFunctionType = SegmentationLevelSetFunction< OutputImageType, FeatureImageType > |
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using | Self = SegmentationLevelSetImageFilter |
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using | SpeedImageType = typename SegmentationFunctionType::ImageType |
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using | Superclass = SparseFieldLevelSetImageFilter< TInputImage, OutputImageType > |
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using | TimeStepType = typename Superclass::TimeStepType |
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using | ValueType = typename Superclass::ValueType |
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using | VectorImageType = typename SegmentationFunctionType::VectorImageType |
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using | ConstPointer = SmartPointer< const Self > |
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using | IndexType = typename OutputImageType::IndexType |
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using | InputImageType = TInputImage |
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using | LayerListType = std::vector< LayerPointerType > |
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using | LayerNodeStorageType = ObjectStore< LayerNodeType > |
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using | LayerNodeType = SparseFieldLevelSetNode< IndexType > |
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using | LayerPointerType = typename LayerType::Pointer |
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using | LayerType = SparseFieldLayer< LayerNodeType > |
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using | NeighborhoodScalesType = typename Superclass::NeighborhoodScalesType |
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using | OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension > |
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using | Pointer = SmartPointer< Self > |
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using | RadiusType = typename Superclass::RadiusType |
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using | Self = SparseFieldLevelSetImageFilter |
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using | StatusImageType = Image< StatusType, Self::ImageDimension > |
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using | StatusType = signed char |
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using | Superclass = FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | TimeStepType = typename Superclass::TimeStepType |
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using | UpdateBufferType = std::vector< ValueType > |
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using | ValueType = typename OutputImageType::ValueType |
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using | ConstPointer = SmartPointer< const Self > |
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using | FiniteDifferenceFunctionType = FiniteDifferenceFunction< Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | InputImageType = TInputImage |
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using | InputPixelType = typename TInputImage::PixelType |
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using | InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType |
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using | NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType |
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using | OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension > |
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using | OutputPixelType = typename Image< TOutputPixelType, TInputImage::ImageDimension >::PixelType |
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using | OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType |
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using | PixelType = OutputPixelType |
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using | Pointer = SmartPointer< Self > |
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using | RadiusType = typename FiniteDifferenceFunctionType::RadiusType |
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using | Self = FiniteDifferenceImageFilter |
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using | Superclass = InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType |
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using | ConstPointer = SmartPointer< const Self > |
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using | InputImageConstPointer = typename InputImageType::ConstPointer |
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using | InputImagePixelType = typename InputImageType::PixelType |
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using | InputImagePointer = typename InputImageType::Pointer |
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using | InputImageRegionType = typename InputImageType::RegionType |
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using | InputImageType = TInputImage |
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using | OutputImagePixelType = typename Superclass::OutputImagePixelType |
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using | OutputImagePointer = typename Superclass::OutputImagePointer |
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using | OutputImageRegionType = typename Superclass::OutputImageRegionType |
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using | OutputImageType = typename Superclass::OutputImageType |
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using | Pointer = SmartPointer< Self > |
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using | Self = InPlaceImageFilter |
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using | Superclass = ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | ConstPointer = SmartPointer< const Self > |
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using | InputImageConstPointer = typename InputImageType::ConstPointer |
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using | InputImagePixelType = typename InputImageType::PixelType |
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using | InputImagePointer = typename InputImageType::Pointer |
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using | InputImageRegionType = typename InputImageType::RegionType |
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using | InputImageType = TInputImage |
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using | OutputImagePixelType = typename Superclass::OutputImagePixelType |
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using | OutputImageRegionType = typename Superclass::OutputImageRegionType |
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using | Pointer = SmartPointer< Self > |
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using | Self = ImageToImageFilter |
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using | Superclass = ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | ConstPointer = SmartPointer< const Self > |
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using | DataObjectIdentifierType = Superclass::DataObjectIdentifierType |
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using | DataObjectPointer = DataObject::Pointer |
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using | DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType |
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using | OutputImagePixelType = typename OutputImageType::PixelType |
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using | OutputImagePointer = typename OutputImageType::Pointer |
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using | OutputImageRegionType = typename OutputImageType::RegionType |
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using | OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension > |
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using | Pointer = SmartPointer< Self > |
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using | Self = ImageSource |
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using | Superclass = ProcessObject |
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using | ConstPointer = SmartPointer< const Self > |
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using | DataObjectIdentifierType = DataObject::DataObjectIdentifierType |
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using | DataObjectPointer = DataObject::Pointer |
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using | DataObjectPointerArray = std::vector< DataObjectPointer > |
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using | DataObjectPointerArraySizeType = DataObjectPointerArray::size_type |
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using | MultiThreaderType = MultiThreaderBase |
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using | NameArray = std::vector< DataObjectIdentifierType > |
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using | Pointer = SmartPointer< Self > |
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using | Self = ProcessObject |
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using | Superclass = Object |
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using | ConstPointer = SmartPointer< const Self > |
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using | Pointer = SmartPointer< Self > |
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using | Self = Object |
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using | Superclass = LightObject |
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using | ConstPointer = SmartPointer< const Self > |
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using | Pointer = SmartPointer< Self > |
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using | Self = LightObject |
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void | PrintSelf (std::ostream &os, Indent indent) const override |
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| ThresholdSegmentationLevelSetImageFilter () |
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| ~ThresholdSegmentationLevelSetImageFilter () override=default |
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void | GenerateData () override |
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| SegmentationLevelSetImageFilter () |
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| ~SegmentationLevelSetImageFilter () override=default |
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void | InitializeIteration () override |
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void | AllocateUpdateBuffer () override |
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void | ApplyUpdate (const TimeStepType &dt) override |
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TimeStepType | CalculateChange () override |
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virtual ValueType | CalculateUpdateValue (const IndexType &, const TimeStepType &dt, const ValueType &value, const ValueType &change) |
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void | ConstructActiveLayer () |
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void | ConstructLayer (StatusType from, StatusType to) |
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void | CopyInputToOutput () override |
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virtual ValueType | GetValueOne () const |
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virtual ValueType | GetValueZero () const |
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void | Initialize () override |
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void | InitializeActiveLayerValues () |
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virtual void | InitializeBackgroundPixels () |
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void | PostProcessOutput () override |
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void | PrintSelf (std::ostream &os, Indent indent) const override |
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void | ProcessOutsideList (LayerType *OutsideList, StatusType ChangeToStatus) |
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void | ProcessStatusList (LayerType *InputList, LayerType *OutputList, StatusType ChangeToStatus, StatusType SearchForStatus) |
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void | PropagateAllLayerValues () |
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void | PropagateLayerValues (StatusType from, StatusType to, StatusType promote, int InOrOut) |
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| SparseFieldLevelSetImageFilter () |
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void | UpdateActiveLayerValues (TimeStepType dt, LayerType *StatusUpList, LayerType *StatusDownList) |
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| ~SparseFieldLevelSetImageFilter () override=default |
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| FiniteDifferenceImageFilter () |
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void | GenerateData () override |
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void | GenerateInputRequestedRegion () override |
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virtual bool | Halt () |
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virtual TimeStepType | ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const |
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virtual void | SetElapsedIterations (IdentifierType _arg) |
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virtual bool | ThreadedHalt (void *) |
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| ~FiniteDifferenceImageFilter () override=default |
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void | AllocateOutputs () override |
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virtual bool | GetRunningInPlace () const |
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| InPlaceImageFilter ()=default |
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void | ReleaseInputs () override |
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| ~InPlaceImageFilter () override=default |
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virtual void | CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion) |
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virtual void | CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion) |
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| ImageToImageFilter () |
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void | VerifyInputInformation () ITKv5_CONST override |
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| ~ImageToImageFilter () override |
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void | PushBackInput (const DataObject *input) override |
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void | PushFrontInput (const DataObject *input) override |
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virtual void | AfterThreadedGenerateData () |
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virtual void | BeforeThreadedGenerateData () |
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void | ClassicMultiThread (ThreadFunctionType callbackFunction) |
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virtual const
ImageRegionSplitterBase * | GetImageRegionSplitter () const |
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| ImageSource () |
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virtual unsigned int | SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion) |
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| ~ImageSource () override=default |
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virtual void | ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId) |
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virtual void | DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread) |
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virtual bool | GetDynamicMultiThreading () const |
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virtual void | SetDynamicMultiThreading (bool _arg) |
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virtual void | DynamicMultiThreadingOn () |
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virtual void | DynamicMultiThreadingOff () |
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virtual void | AddInput (DataObject *input) |
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void | AddOptionalInputName (const DataObjectIdentifierType &) |
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void | AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx) |
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virtual void | AddOutput (DataObject *output) |
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bool | AddRequiredInputName (const DataObjectIdentifierType &) |
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bool | AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx) |
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virtual void | CacheInputReleaseDataFlags () |
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virtual void | GenerateOutputInformation () |
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virtual void | GenerateOutputRequestedRegion (DataObject *output) |
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DataObject * | GetInput (const DataObjectIdentifierType &key) |
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const DataObject * | GetInput (const DataObjectIdentifierType &key) const |
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virtual const
DataObjectPointerArraySizeType & | GetNumberOfRequiredInputs () const |
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virtual const
DataObjectPointerArraySizeType & | GetNumberOfRequiredOutputs () const |
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bool | IsIndexedInputName (const DataObjectIdentifierType &) const |
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bool | IsIndexedOutputName (const DataObjectIdentifierType &) const |
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bool | IsRequiredInputName (const DataObjectIdentifierType &) const |
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DataObjectPointerArraySizeType | MakeIndexFromInputName (const DataObjectIdentifierType &name) const |
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DataObjectPointerArraySizeType | MakeIndexFromOutputName (const DataObjectIdentifierType &name) const |
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DataObjectIdentifierType | MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const |
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DataObjectIdentifierType | MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const |
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| ProcessObject () |
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virtual void | PropagateResetPipeline () |
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virtual void | RemoveInput (const DataObjectIdentifierType &key) |
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virtual void | RemoveInput (DataObjectPointerArraySizeType) |
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virtual void | RemoveOutput (const DataObjectIdentifierType &key) |
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virtual void | RemoveOutput (DataObjectPointerArraySizeType idx) |
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bool | RemoveRequiredInputName (const DataObjectIdentifierType &) |
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virtual void | RestoreInputReleaseDataFlags () |
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virtual void | SetInput (const DataObjectIdentifierType &key, DataObject *input) |
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virtual void | SetNthInput (DataObjectPointerArraySizeType num, DataObject *input) |
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virtual void | SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output) |
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void | SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num) |
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void | SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num) |
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virtual void | SetNumberOfRequiredInputs (DataObjectPointerArraySizeType) |
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virtual void | SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg) |
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virtual void | SetOutput (const DataObjectIdentifierType &key, DataObject *output) |
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virtual void | SetPrimaryInput (DataObject *input) |
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virtual void | SetPrimaryOutput (DataObject *output) |
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void | SetRequiredInputNames (const NameArray &) |
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virtual void | VerifyPreconditions () ITKv5_CONST |
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| ~ProcessObject () override |
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DataObject * | GetInput (DataObjectPointerArraySizeType idx) |
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const DataObject * | GetInput (DataObjectPointerArraySizeType idx) const |
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DataObject * | GetPrimaryInput () |
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const DataObject * | GetPrimaryInput () const |
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virtual void | SetPrimaryInputName (const DataObjectIdentifierType &key) |
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virtual const char * | GetPrimaryInputName () const |
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DataObject * | GetOutput (const DataObjectIdentifierType &key) |
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const DataObject * | GetOutput (const DataObjectIdentifierType &key) const |
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virtual void | SetPrimaryOutputName (const DataObjectIdentifierType &key) |
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virtual const char * | GetPrimaryOutputName () const |
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DataObject * | GetOutput (DataObjectPointerArraySizeType idx) |
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const DataObject * | GetOutput (DataObjectPointerArraySizeType idx) const |
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DataObject * | GetPrimaryOutput () |
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const DataObject * | GetPrimaryOutput () const |
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| Object () |
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bool | PrintObservers (std::ostream &os, Indent indent) const |
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virtual void | SetTimeStamp (const TimeStamp &time) |
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| ~Object () override |
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virtual LightObject::Pointer | InternalClone () const |
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| LightObject () |
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virtual void | PrintHeader (std::ostream &os, Indent indent) const |
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virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
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virtual | ~LightObject () |
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