ITK  5.2.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | List of all members

#include <itkGDCMImageIO.h>

+ Inheritance diagram for itk::GDCMImageIO:
+ Collaboration diagram for itk::GDCMImageIO:

Public Types

using Pointer = SmartPointer< Self >
 
using Self = GDCMImageIO
 
using Superclass = ImageIOBase
 
- Public Types inherited from itk::ImageIOBase
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = ImageIOBase
 
using Superclass = LightProcessObject
 
using IndexValueType = ::itk::IndexValueType
 
using SizeValueType = ::itk::SizeValueType
 
using IOComponentEnum = itk::IOComponentEnum
 
using IOFileEnum = itk::IOFileEnum
 
using IOByteOrderEnum = itk::IOByteOrderEnum
 
using SizeType = ::itk::intmax_t
 
using BufferSizeType = ::itk::OffsetValueType
 
using ArrayOfExtensionsType = std::vector< std::string >
 
- Public Types inherited from itk::LightProcessObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

bool CanReadFile (const char *) override
 
virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual const char * GetNameOfClass () const
 
void Read (void *pointer) override
 
void ReadImageInformation () override
 
- Public Member Functions inherited from itk::ImageIOBase
virtual void SetFileName (const char *_arg)
 
virtual const char * GetFileName () const
 
void SetNumberOfDimensions (unsigned int)
 
virtual unsigned int GetNumberOfDimensions () const
 
virtual void SetDimensions (unsigned int i, SizeValueType dim)
 
virtual SizeValueType GetDimensions (unsigned int i) const
 
virtual void SetOrigin (unsigned int i, double origin)
 
virtual double GetOrigin (unsigned int i) const
 
virtual void SetSpacing (unsigned int i, double spacing)
 
virtual double GetSpacing (unsigned int i) const
 
virtual void SetDirection (unsigned int i, const std::vector< double > &direction)
 
virtual void SetDirection (unsigned int i, const vnl_vector< double > &direction)
 
virtual std::vector< double > GetDirection (unsigned int i) const
 
virtual std::vector< double > GetDefaultDirection (unsigned int k) const
 
virtual void SetIORegion (ImageIORegion _arg)
 
virtual const ImageIORegionGetIORegion () const
 
virtual void SetPixelType (const ::itk::CommonEnums::IOPixel _arg)
 
virtual ::itk::CommonEnums::IOPixel GetPixelType () const
 
virtual void SetComponentType (const IOComponentEnum _arg)
 
virtual IOComponentEnum GetComponentType () const
 
virtual const std::type_info & GetComponentTypeInfo () const
 
virtual void SetNumberOfComponents (unsigned int _arg)
 
virtual const unsigned int & GetNumberOfComponents () const
 
virtual void SetUseCompression (bool _arg)
 
virtual bool GetUseCompression () const
 
virtual void UseCompressionOn ()
 
virtual void UseCompressionOff ()
 
virtual void SetCompressionLevel (int _arg)
 
virtual int GetCompressionLevel () const
 
virtual void SetCompressor (std::string _c)
 
virtual const std::string & GetCompressor () const
 
virtual void SetUseStreamedReading (bool _arg)
 
virtual bool GetUseStreamedReading () const
 
virtual void UseStreamedReadingOn ()
 
virtual void UseStreamedReadingOff ()
 
virtual void SetUseStreamedWriting (bool _arg)
 
virtual bool GetUseStreamedWriting () const
 
virtual void UseStreamedWritingOn ()
 
virtual void UseStreamedWritingOff ()
 
virtual void SetExpandRGBPalette (bool _arg)
 
virtual bool GetExpandRGBPalette () const
 
virtual void ExpandRGBPaletteOn ()
 
virtual void ExpandRGBPaletteOff ()
 
virtual void SetWritePalette (bool _arg)
 
virtual bool GetWritePalette () const
 
virtual void WritePaletteOn ()
 
virtual void WritePaletteOff ()
 
virtual bool GetIsReadAsScalarPlusPalette () const
 
virtual void SetFileType (const IOFileEnum _arg)
 
virtual IOFileEnum GetFileType () const
 
void SetFileTypeToASCII ()
 
void SetFileTypeToBinary ()
 
virtual void SetByteOrder (const IOByteOrderEnum _arg)
 
virtual IOByteOrderEnum GetByteOrder () const
 
void SetByteOrderToBigEndian ()
 
void SetByteOrderToLittleEndian ()
 
std::string GetFileTypeAsString (IOFileEnum) const
 
std::string GetByteOrderAsString (IOByteOrderEnum) const
 
virtual SizeType GetPixelStride () const
 
SizeType GetImageSizeInPixels () const
 
SizeType GetImageSizeInBytes () const
 
SizeType GetImageSizeInComponents () const
 
virtual unsigned int GetComponentSize () const
 
virtual bool CanStreamRead ()
 
virtual bool CanStreamWrite ()
 
virtual bool SupportsDimension (unsigned long dim)
 
virtual ImageIORegion GenerateStreamableReadRegionFromRequestedRegion (const ImageIORegion &requested) const
 
virtual unsigned int GetActualNumberOfSplitsForWriting (unsigned int numberOfRequestedSplits, const ImageIORegion &pasteRegion, const ImageIORegion &largestPossibleRegion)
 
virtual ImageIORegion GetSplitRegionForWriting (unsigned int ithPiece, unsigned int numberOfActualSplits, const ImageIORegion &pasteRegion, const ImageIORegion &largestPossibleRegion)
 
const ArrayOfExtensionsTypeGetSupportedReadExtensions () const
 
const ArrayOfExtensionsTypeGetSupportedWriteExtensions () const
 
template<typename TPixel >
void SetTypeInfo (const TPixel *)
 
template<typename TPixel >
void SetPixelTypeInfo (const TPixel *)
 
template<typename TPixel >
void SetPixelTypeInfo (const RGBPixel< TPixel > *)
 
template<typename TPixel >
void SetPixelTypeInfo (const RGBAPixel< TPixel > *)
 
template<unsigned VLength>
void SetPixelTypeInfo (const Offset< VLength > *)
 
template<typename TPixel , unsigned VLength>
void SetPixelTypeInfo (const Vector< TPixel, VLength > *)
 
template<typename TCoordRep , unsigned NPointDimension>
void SetPixelTypeInfo (const Point< TCoordRep, NPointDimension > *)
 
template<typename TPixel , unsigned VLength>
void SetPixelTypeInfo (const CovariantVector< TPixel, VLength > *)
 
template<typename TPixel , unsigned VLength>
void SetPixelTypeInfo (const SymmetricSecondRankTensor< TPixel, VLength > *)
 
template<typename TPixel >
void SetPixelTypeInfo (const DiffusionTensor3D< TPixel > *)
 
template<typename TPixel >
void SetPixelTypeInfo (const std::complex< TPixel > *)
 
template<typename TPixel , unsigned VLength>
void SetPixelTypeInfo (const FixedArray< TPixel, VLength > *)
 
template<typename TPixel >
void SetPixelTypeInfo (const VariableLengthVector< TPixel > *)
 
template<typename TValue >
void SetPixelTypeInfo (const Array< TValue > *)
 
template<typename TPixel , unsigned VLength>
void SetPixelTypeInfo (const Matrix< TPixel, VLength, VLength > *)
 
template<typename TValue >
void SetPixelTypeInfo (const VariableSizeMatrix< TValue > *)
 
- Public Member Functions inherited from itk::LightProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void SetProgress (float _arg)
 
virtual const float & GetProgress () const
 
void UpdateProgress (float amount)
 
virtual void UpdateOutputData ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageIOBase
static std::string GetComponentTypeAsString (IOComponentEnum)
 
static IOComponentEnum GetComponentTypeFromString (const std::string &typeString)
 
static std::string GetPixelTypeAsString (IOPixelEnum)
 
static IOPixelEnum GetPixelTypeFromString (const std::string &pixelString)
 
- Static Public Member Functions inherited from itk::LightProcessObject
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 
using CompressionEnum = GDCMImageIOEnums::Compression
 
double m_RescaleSlope
 
double m_RescaleIntercept
 
std::string m_UIDPrefix
 
std::string m_StudyInstanceUID
 
std::string m_SeriesInstanceUID
 
std::string m_FrameOfReferenceInstanceUID
 
bool m_KeepOriginalUID
 
bool m_LoadPrivateTags
 
bool m_ReadYBRtoRGB
 
unsigned int m_GlobalNumberOfDimensions
 
CompressionEnum m_CompressionType
 
bool m_SingleBit
 
IOComponentEnum m_InternalComponentType
 
InternalHeader * m_DICOMHeader
 
static bool GetLabelFromTag (const std::string &tag, std::string &labelId)
 
virtual ::itk::CommonEnums::IOComponent GetInternalComponentType () const
 
virtual void SetInternalComponentType (const ::itk::CommonEnums::IOComponent _arg)
 
bool CanWriteFile (const char *) override
 
void WriteImageInformation () override
 
void Write (const void *buffer) override
 
virtual double GetRescaleSlope () const
 
virtual double GetRescaleIntercept () const
 
virtual const char * GetUIDPrefix () const
 
virtual void SetUIDPrefix (const char *_arg)
 
virtual const char * GetStudyInstanceUID () const
 
virtual const char * GetSeriesInstanceUID () const
 
virtual const char * GetFrameOfReferenceInstanceUID () const
 
virtual void SetKeepOriginalUID (bool _arg)
 
virtual bool GetKeepOriginalUID () const
 
virtual void KeepOriginalUIDOn ()
 
virtual void KeepOriginalUIDOff ()
 
virtual void SetLoadPrivateTags (bool _arg)
 
virtual bool GetLoadPrivateTags () const
 
virtual void LoadPrivateTagsOn ()
 
virtual void LoadPrivateTagsOff ()
 
virtual void SetReadYBRtoRGB (bool _arg)
 
virtual bool GetReadYBRtoRGB () const
 
virtual void ReadYBRtoRGBOn ()
 
virtual void ReadYBRtoRGBOff ()
 
bool GetValueFromTag (const std::string &tag, std::string &value)
 
virtual void SetCompressionType (const CompressionEnum _arg)
 
virtual CompressionEnum GetCompressionType () const
 
void InternalSetCompressor (const std::string &_compressor) override
 
 GDCMImageIO ()
 
 ~GDCMImageIO () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
void InternalReadImageInformation ()
 

Additional Inherited Members

- Protected Member Functions inherited from itk::ImageIOBase
 ImageIOBase ()
 
 ~ImageIOBase () override
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
virtual bool HasSupportedReadExtension (const char *fileName, bool ignoreCase=true)
 
virtual bool HasSupportedWriteExtension (const char *fileName, bool ignoreCase=true)
 
virtual void SetMaximumCompressionLevel (int)
 
virtual int GetMaximumCompressionLevel () const
 
virtual void Reset (const bool freeDynamic=true)
 
void Resize (const unsigned int numDimensions, const unsigned int *dimensions)
 
virtual unsigned int GetPixelSize () const
 
void ComputeStrides ()
 
SizeType GetComponentStride () const
 
SizeType GetRowStride () const
 
SizeType GetSliceStride () const
 
virtual void OpenFileForReading (std::ifstream &inputStream, const std::string &filename, bool ascii=false)
 
virtual void OpenFileForWriting (std::ofstream &outputStream, const std::string &filename, bool truncate=true, bool ascii=false)
 
virtual void WriteBufferAsASCII (std::ostream &os, const void *buffer, IOComponentEnum ctype, SizeType numComp)
 
virtual void ReadBufferAsASCII (std::istream &is, void *buffer, IOComponentEnum ctype, SizeType numComp)
 
bool ReadBufferAsBinary (std::istream &is, void *buffer, SizeType num)
 
void AddSupportedReadExtension (const char *extension)
 
void AddSupportedWriteExtension (const char *extension)
 
void SetSupportedReadExtensions (const ArrayOfExtensionsType &)
 
void SetSupportedWriteExtensions (const ArrayOfExtensionsType &)
 
virtual unsigned int GetActualNumberOfSplitsForWritingCanStreamWrite (unsigned int numberOfRequestedSplits, const ImageIORegion &pasteRegion) const
 
virtual ImageIORegion GetSplitRegionForWritingCanStreamWrite (unsigned int ithPiece, unsigned int numberOfActualSplits, const ImageIORegion &pasteRegion) const
 
- Protected Member Functions inherited from itk::LightProcessObject
 LightProcessObject ()
 
 ~LightProcessObject () override
 
virtual void GenerateData ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 
- Protected Attributes inherited from itk::ImageIOBase
IOPixelEnum m_PixelType { IOPixelEnum::SCALAR }
 
IOComponentEnum m_ComponentType { IOComponentEnum::UNKNOWNCOMPONENTTYPE }
 
IOByteOrderEnum m_ByteOrder { IOByteOrderEnum::OrderNotApplicable }
 
IOFileEnum m_FileType { IOFileEnum::TypeNotApplicable }
 
bool m_Initialized
 
std::string m_FileName
 
unsigned int m_NumberOfComponents
 
unsigned int m_NumberOfDimensions { 0 }
 
bool m_UseCompression { false }
 
int m_CompressionLevel { 30 }
 
int m_MaximumCompressionLevel { 100 }
 
std::string m_Compressor { "uninitialized" }
 
bool m_UseStreamedReading
 
bool m_UseStreamedWriting
 
bool m_ExpandRGBPalette
 
bool m_IsReadAsScalarPlusPalette
 
bool m_WritePalette
 
ImageIORegion m_IORegion
 
std::vector< SizeValueTypem_Dimensions
 
std::vector< double > m_Spacing
 
std::vector< double > m_Origin
 
std::vector< std::vector< double > > m_Direction
 
std::vector< SizeTypem_Strides
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

ImageIO class for reading and writing DICOM V3.0 and ACR/NEMA 1&2 uncompressed images. This class is only an adaptor to the GDCM library.

GDCM can be found at: http://sourceforge.net/projects/gdcm

To learn more about the revision shipped with ITK, call

git log – Modules/ThirdParty/GDCM/src/

from an ITK Git checkout.

The compressors supported include "JPEG2000" (default), and "JPEG". The compression level parameter is not supported.

Warning
There are several restrictions to this current writer:
  • Even though during the writing process you pass in a DICOM file as input The output file may not contains ALL DICOM field from the input file. In particular:
    • The SeQuence DICOM field (SQ).
    • Fields from Private Dictionary.
  • Some very long (>0xfff) binary fields are not loaded (typically 0029|0010), you need to explicitly set the maximum length of elements to load to be bigger (see Get/SetMaxSizeLoadEntry).
  • In DICOM some fields are stored directly using their binary representation. When loaded into the MetaDataDictionary some fields are converted to ASCII (only VR: OB/OW/OF and UN are encoded as mime64).
ITK Sphinx Examples:
Examples
Examples/IO/DicomImageReadChangeHeaderWrite.cxx, Examples/IO/DicomImageReadPrintTags.cxx, Examples/IO/DicomImageReadWrite.cxx, Examples/IO/DicomSeriesReadGaussianImageWrite.cxx, Examples/IO/DicomSeriesReadImageWrite2.cxx, Examples/IO/DicomSeriesReadPrintTags.cxx, Examples/IO/DicomSeriesReadSeriesWrite.cxx, Examples/IO/ImageReadDicomSeriesWrite.cxx, SphinxExamples/src/IO/GDCM/ReadAndPrintDICOMTags/Code.cxx, SphinxExamples/src/IO/GDCM/ReadDICOMSeriesAndWrite3DImage/Code.cxx, and SphinxExamples/src/IO/GDCM/ResampleDICOMSeries/Code.cxx.

Definition at line 109 of file itkGDCMImageIO.h.

Member Typedef Documentation

◆ CompressionEnum

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 351 of file itkGDCMImageIO.h.

◆ Pointer

Definition at line 118 of file itkGDCMImageIO.h.

◆ Self

Standard class type aliases.

Definition at line 116 of file itkGDCMImageIO.h.

◆ Superclass

Definition at line 117 of file itkGDCMImageIO.h.

Constructor & Destructor Documentation

◆ GDCMImageIO()

itk::GDCMImageIO::GDCMImageIO ( )
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ ~GDCMImageIO()

itk::GDCMImageIO::~GDCMImageIO ( )
overrideprotected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Member Function Documentation

◆ CanReadFile()

bool itk::GDCMImageIO::CanReadFile ( const char *  )
overridevirtual

Determine the file type. Returns true if this ImageIO can read the file specified.

Implements itk::ImageIOBase.

◆ CanWriteFile()

bool itk::GDCMImageIO::CanWriteFile ( const char *  )
overridevirtual

Determine the file type. Returns true if this ImageIO can write the file specified. GDCM triggers on ".dcm" and ".dicom".

Implements itk::ImageIOBase.

◆ CreateAnother()

virtual::itk::LightObject::Pointer itk::GDCMImageIO::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightProcessObject.

◆ GetCompressionType()

virtual CompressionEnum itk::GDCMImageIO::GetCompressionType ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetFrameOfReferenceInstanceUID()

virtual const char* itk::GDCMImageIO::GetFrameOfReferenceInstanceUID ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetInternalComponentType()

virtual ::itk::CommonEnums::IOComponent itk::GDCMImageIO::GetInternalComponentType ( ) const

Set/Get the original component type of the image. This differs from ComponentType which may change as a function of rescale slope and intercept.

◆ GetKeepOriginalUID()

virtual bool itk::GDCMImageIO::GetKeepOriginalUID ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetLabelFromTag()

static bool itk::GDCMImageIO::GetLabelFromTag ( const std::string &  tag,
std::string &  labelId 
)
static

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Examples
Examples/IO/DicomImageReadPrintTags.cxx.

◆ GetLoadPrivateTags()

virtual bool itk::GDCMImageIO::GetLoadPrivateTags ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetNameOfClass()

virtual const char* itk::GDCMImageIO::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageIOBase.

◆ GetReadYBRtoRGB()

virtual bool itk::GDCMImageIO::GetReadYBRtoRGB ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetRescaleIntercept()

virtual double itk::GDCMImageIO::GetRescaleIntercept ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetRescaleSlope()

virtual double itk::GDCMImageIO::GetRescaleSlope ( ) const
virtual

Macro to access Rescale Slope and Rescale Intercept.

◆ GetSeriesInstanceUID()

virtual const char* itk::GDCMImageIO::GetSeriesInstanceUID ( ) const
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ GetStudyInstanceUID()

virtual const char* itk::GDCMImageIO::GetStudyInstanceUID ( ) const
virtual

Access the generated DICOM UIDs.

◆ GetUIDPrefix()

virtual const char* itk::GDCMImageIO::GetUIDPrefix ( ) const
virtual

Macro to access the DICOM UID prefix. By default this is the ITK root id. This default can be overriden if the exam is for example part of an existing study.

◆ GetValueFromTag()

bool itk::GDCMImageIO::GetValueFromTag ( const std::string &  tag,
std::string &  value 
)

More general method to retrieve an arbitrary DICOM value based on a DICOM Tag (eg "0123|45ef").

◆ InternalReadImageInformation()

void itk::GDCMImageIO::InternalReadImageInformation ( )
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ InternalSetCompressor()

void itk::GDCMImageIO::InternalSetCompressor ( const std::string &  _compressor)
overridevirtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Reimplemented from itk::ImageIOBase.

◆ KeepOriginalUIDOff()

virtual void itk::GDCMImageIO::KeepOriginalUIDOff ( )
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ KeepOriginalUIDOn()

virtual void itk::GDCMImageIO::KeepOriginalUIDOn ( )
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ LoadPrivateTagsOff()

virtual void itk::GDCMImageIO::LoadPrivateTagsOff ( )
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ LoadPrivateTagsOn()

virtual void itk::GDCMImageIO::LoadPrivateTagsOn ( )
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ New()

static Pointer itk::GDCMImageIO::New ( )
static

Method for creation through the object factory.

Examples
Examples/IO/DicomPrintPatientInformation.cxx.

◆ PrintSelf()

void itk::GDCMImageIO::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Reimplemented from itk::ImageIOBase.

◆ Read()

void itk::GDCMImageIO::Read ( void *  pointer)
overridevirtual

Reads the data from disk into the memory buffer provided.

Implements itk::ImageIOBase.

◆ ReadImageInformation()

void itk::GDCMImageIO::ReadImageInformation ( )
overridevirtual

Read the spacing and dimension information for the current filename.

Implements itk::ImageIOBase.

◆ ReadYBRtoRGBOff()

virtual void itk::GDCMImageIO::ReadYBRtoRGBOff ( )
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ ReadYBRtoRGBOn()

virtual void itk::GDCMImageIO::ReadYBRtoRGBOn ( )
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ SetCompressionType()

virtual void itk::GDCMImageIO::SetCompressionType ( const CompressionEnum  _arg)
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ SetInternalComponentType()

virtual void itk::GDCMImageIO::SetInternalComponentType ( const ::itk::CommonEnums::IOComponent  _arg)
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ SetKeepOriginalUID()

virtual void itk::GDCMImageIO::SetKeepOriginalUID ( bool  _arg)
virtual

Preserve the original DICOM UIDs of the input files.

◆ SetLoadPrivateTags()

virtual void itk::GDCMImageIO::SetLoadPrivateTags ( bool  _arg)
virtual

Parse and load any private tags in the DICOM file. Loading DICOM files is faster when private tags are not needed. Default is false.

◆ SetReadYBRtoRGB()

virtual void itk::GDCMImageIO::SetReadYBRtoRGB ( bool  _arg)
virtual

Convert Y'CbCr (YBR_FULL, YBR_FULL_422) to RGB. Default is true, not required for YBR_RCT and YBR_ICT.

◆ SetUIDPrefix()

virtual void itk::GDCMImageIO::SetUIDPrefix ( const char *  _arg)
virtual

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

◆ Write()

void itk::GDCMImageIO::Write ( const void *  buffer)
overridevirtual

Writes the data to disk from the memory buffer provided. Make sure that the IORegion has been set properly.

Implements itk::ImageIOBase.

◆ WriteImageInformation()

void itk::GDCMImageIO::WriteImageInformation ( )
overridevirtual

Writes the spacing and dimensions of the image. Assumes SetFileName has been called with a valid file name.

Implements itk::ImageIOBase.

Member Data Documentation

◆ m_CompressionType

CompressionEnum itk::GDCMImageIO::m_CompressionType
private

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 431 of file itkGDCMImageIO.h.

◆ m_DICOMHeader

InternalHeader* itk::GDCMImageIO::m_DICOMHeader
private

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 437 of file itkGDCMImageIO.h.

◆ m_FrameOfReferenceInstanceUID

std::string itk::GDCMImageIO::m_FrameOfReferenceInstanceUID
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 386 of file itkGDCMImageIO.h.

◆ m_GlobalNumberOfDimensions

unsigned int itk::GDCMImageIO::m_GlobalNumberOfDimensions
private

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 429 of file itkGDCMImageIO.h.

◆ m_InternalComponentType

IOComponentEnum itk::GDCMImageIO::m_InternalComponentType
private

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 435 of file itkGDCMImageIO.h.

◆ m_KeepOriginalUID

bool itk::GDCMImageIO::m_KeepOriginalUID
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 388 of file itkGDCMImageIO.h.

◆ m_LoadPrivateTags

bool itk::GDCMImageIO::m_LoadPrivateTags
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 390 of file itkGDCMImageIO.h.

◆ m_ReadYBRtoRGB

bool itk::GDCMImageIO::m_ReadYBRtoRGB
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 392 of file itkGDCMImageIO.h.

◆ m_RescaleIntercept

double itk::GDCMImageIO::m_RescaleIntercept
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 378 of file itkGDCMImageIO.h.

◆ m_RescaleSlope

double itk::GDCMImageIO::m_RescaleSlope
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 376 of file itkGDCMImageIO.h.

◆ m_SeriesInstanceUID

std::string itk::GDCMImageIO::m_SeriesInstanceUID
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 384 of file itkGDCMImageIO.h.

◆ m_SingleBit

bool itk::GDCMImageIO::m_SingleBit
private

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 433 of file itkGDCMImageIO.h.

◆ m_StudyInstanceUID

std::string itk::GDCMImageIO::m_StudyInstanceUID
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 382 of file itkGDCMImageIO.h.

◆ m_UIDPrefix

std::string itk::GDCMImageIO::m_UIDPrefix
protected

Method for consulting the DICOM dictionary and recovering the text description of a field using its numeric tag represented as a string. If the tagkey is not found in the dictionary then this static method return false and the value "Unknown " in the labelId. If the tagkey is found then this static method returns true and the actual string descriptor of the tagkey is returned in the variable labelId.

Definition at line 380 of file itkGDCMImageIO.h.


The documentation for this class was generated from the following file: