#include <itkThresholdMaximumConnectedComponentsImageFilter.h>

Inheritance diagram for itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >:

Collaboration diagram for itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >:

Public Types
using	ConstPointer = SmartPointer< const Self >

using	OutputPixelType = typename TOutputImage::PixelType

using	PixelType = typename TInputImage::PixelType

using	Pointer = SmartPointer< Self >

using	Self = ThresholdMaximumConnectedComponentsImageFilter

using	Superclass = ImageToImageFilter< TInputImage, TOutputImage >

Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using	ConstPointer = SmartPointer< const Self >

using	InputImageConstPointer = typename InputImageType::ConstPointer

using	InputImagePixelType = typename InputImageType::PixelType

using	InputImagePointer = typename InputImageType::Pointer

using	InputImageRegionType = typename InputImageType::RegionType

using	InputImageType = TInputImage

using	OutputImagePixelType = typename Superclass::OutputImagePixelType

using	OutputImageRegionType = typename Superclass::OutputImageRegionType

using	Pointer = SmartPointer< Self >

using	Self = ImageToImageFilter

using	Superclass = ImageSource< TOutputImage >

Public Types inherited from itk::ImageSource< TOutputImage >
using	ConstPointer = SmartPointer< const Self >

using	DataObjectIdentifierType = Superclass::DataObjectIdentifierType

using	DataObjectPointer = DataObject::Pointer

using	DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType

using	OutputImagePixelType = typename OutputImageType::PixelType

using	OutputImagePointer = typename OutputImageType::Pointer

using	OutputImageRegionType = typename OutputImageType::RegionType

using	OutputImageType = TOutputImage

using	Pointer = SmartPointer< Self >

using	Self = ImageSource

using	Superclass = ProcessObject

Public Types inherited from itk::ProcessObject
using	ConstPointer = SmartPointer< const Self >

using	DataObjectIdentifierType = DataObject::DataObjectIdentifierType

using	DataObjectPointer = DataObject::Pointer

using	DataObjectPointerArray = std::vector< DataObjectPointer >

using	DataObjectPointerArraySizeType = DataObjectPointerArray::size_type

using	MultiThreaderType = MultiThreaderBase

using	NameArray = std::vector< DataObjectIdentifierType >

using	Pointer = SmartPointer< Self >

using	Self = ProcessObject

using	Superclass = Object

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const

virtual const char *	GetNameOfClass () const

Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType *	GetInput () const

const InputImageType *	GetInput (unsigned int idx) const

void	PopBackInput () override

void	PopFrontInput () override

virtual void	PushBackInput (const InputImageType *input)

virtual void	PushFrontInput (const InputImageType *input)

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetInput (const InputImageType *input)

virtual void	SetInput (unsigned int, const TInputImage *image)

virtual void	SetCoordinateTolerance (double _arg)

virtual double	GetCoordinateTolerance () const

virtual void	SetDirectionTolerance (double _arg)

virtual double	GetDirectionTolerance () const

Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput ()

const OutputImageType *	GetOutput () const

OutputImageType *	GetOutput (unsigned int idx)

virtual void	GraftOutput (DataObject *graft)

virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)

virtual void	GraftNthOutput (unsigned int idx, DataObject *graft)

ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override

ProcessObject::DataObjectPointer	MakeOutput (const ProcessObject::DataObjectIdentifierType &) override

Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()

virtual void	AbortGenerateDataOn ()

virtual void	EnlargeOutputRequestedRegion (DataObject *)

virtual const bool &	GetAbortGenerateData () const

DataObjectPointerArray	GetIndexedInputs ()

DataObjectPointerArray	GetIndexedOutputs ()

NameArray	GetInputNames () const

DataObjectPointerArray	GetInputs ()

DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const

DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const

DataObjectPointerArraySizeType	GetNumberOfInputs () const

DataObjectPointerArraySizeType	GetNumberOfOutputs () const

virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const

NameArray	GetOutputNames () const

DataObjectPointerArray	GetOutputs ()

virtual float	GetProgress () const

NameArray	GetRequiredInputNames () const

bool	HasInput (const DataObjectIdentifierType &key) const

bool	HasOutput (const DataObjectIdentifierType &key) const

void	IncrementProgress (float increment)

virtual void	PropagateRequestedRegion (DataObject *output)

virtual void	ResetPipeline ()

virtual void	SetAbortGenerateData (bool _arg)

virtual void	Update ()

virtual void	UpdateLargestPossibleRegion ()

virtual void	UpdateOutputData (DataObject *output)

virtual void	UpdateOutputInformation ()

void	UpdateProgress (float progress)

virtual void	SetReleaseDataFlag (bool val)

virtual bool	GetReleaseDataFlag () const

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual const bool &	GetReleaseDataBeforeUpdateFlag () const

virtual void	ReleaseDataBeforeUpdateFlagOn ()

virtual void	ReleaseDataBeforeUpdateFlagOff ()

virtual void	SetNumberOfWorkUnits (ThreadIdType _arg)

virtual const ThreadIdType &	GetNumberOfWorkUnits () const

MultiThreaderType *	GetMultiThreader () const

void	SetMultiThreader (MultiThreaderType *threader)

virtual void	PrepareOutputs ()

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual void	Delete ()

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static void	SetGlobalDefaultDirectionTolerance (double)

static double	GetGlobalDefaultDirectionTolerance ()

static void	SetGlobalDefaultCoordinateTolerance (double)

static double	GetGlobalDefaultCoordinateTolerance ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

using	InputImageType = TInputImage

using	InputImagePointer = typename InputImageType::ConstPointer

using	InputImageRegionType = typename InputImageType::RegionType

using	InputImagePixelType = typename InputImageType::PixelType

using	OutputImageType = TOutputImage

using	OutputImagePointer = typename OutputImageType::Pointer

using	OutputImageRegionType = typename OutputImageType::RegionType

using	OutputImagePixelType = typename OutputImageType::PixelType

using	FilterPixelType = unsigned int

using	FilterImageType = itk::Image< FilterPixelType, Self::ImageDimension >

using	FilterImagePointer = typename FilterImageType::Pointer

using	ThresholdFilterType = BinaryThresholdImageFilter< InputImageType, OutputImageType >

using	ConnectedFilterType = ConnectedComponentImageFilter< OutputImageType, FilterImageType >

using	RelabelFilterType = RelabelComponentImageFilter< FilterImageType, FilterImageType >

using	MinMaxCalculatorType = MinimumMaximumImageCalculator< InputImageType >

static constexpr unsigned int	ImageDimension = TInputImage::ImageDimension

ThresholdFilterType::Pointer	m_ThresholdFilter

ConnectedFilterType::Pointer	m_ConnectedComponent

RelabelFilterType::Pointer	m_LabeledComponent

MinMaxCalculatorType::Pointer	m_MinMaxCalculator

unsigned int	m_MinimumObjectSizeInPixels

OutputPixelType	m_OutsideValue

OutputPixelType	m_InsideValue

PixelType	m_LowerBoundary

PixelType	m_UpperBoundary

PixelType	m_ThresholdValue

SizeValueType	m_NumberOfObjects

virtual void	SetMinimumObjectSizeInPixels (unsigned int _arg)

virtual unsigned int	GetMinimumObjectSizeInPixels () const

virtual void	SetInsideValue (OutputPixelType _arg)

virtual void	SetOutsideValue (OutputPixelType _arg)

virtual void	SetUpperBoundary (PixelType _arg)

virtual OutputPixelType	GetInsideValue () const

virtual OutputPixelType	GetOutsideValue () const

virtual PixelType	GetUpperBoundary () const

virtual SizeValueType	GetNumberOfObjects () const

virtual PixelType	GetThresholdValue () const

	ThresholdMaximumConnectedComponentsImageFilter ()

	~ThresholdMaximumConnectedComponentsImageFilter () override=default

void	PrintSelf (std::ostream &os, Indent indent) const override

void	GenerateData () override

SizeValueType	ComputeConnectedComponents ()

Additional Inherited Members
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static constexpr unsigned int	InputImageDimension = TInputImage::ImageDimension

static constexpr unsigned int	OutputImageDimension = TOutputImage::ImageDimension

Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int	OutputImageDimension = TOutputImage::ImageDimension

Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using	InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >

using	OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >

Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
	ImageToImageFilter ()

	~ImageToImageFilter () override=default

void	VerifyInputInformation () ITKv5_CONST override

void	GenerateInputRequestedRegion () override

virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)

virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)

void	PushBackInput (const DataObject *input) override

void	PushFrontInput (const DataObject *input) override

Protected Member Functions inherited from itk::ImageSource< TOutputImage >
	ImageSource ()

	~ImageSource () override=default

void	ClassicMultiThread (ThreadFunctionType callbackFunction)

virtual void	ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)

virtual void	DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)

virtual void	AllocateOutputs ()

virtual void	BeforeThreadedGenerateData ()

virtual void	AfterThreadedGenerateData ()

virtual const ImageRegionSplitterBase *	GetImageRegionSplitter () const

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)

virtual bool	GetDynamicMultiThreading () const

virtual void	SetDynamicMultiThreading (bool _arg)

virtual void	DynamicMultiThreadingOn ()

virtual void	DynamicMultiThreadingOff ()

Protected Member Functions inherited from itk::ProcessObject
	ProcessObject ()

	~ProcessObject () override

DataObject *	GetInput (const DataObjectIdentifierType &key)

const DataObject *	GetInput (const DataObjectIdentifierType &key) const

DataObject *	GetInput (DataObjectPointerArraySizeType idx)

const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)

virtual void	AddInput (DataObject *input)

virtual void	RemoveInput (const DataObjectIdentifierType &key)

virtual void	RemoveInput (DataObjectPointerArraySizeType)

DataObject *	GetPrimaryInput ()

const DataObject *	GetPrimaryInput () const

virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryInputName () const

virtual void	SetPrimaryInput (DataObject *object)

void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)

virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const

bool	RemoveRequiredInputName (const DataObjectIdentifierType &)

bool	IsRequiredInputName (const DataObjectIdentifierType &) const

void	SetRequiredInputNames (const NameArray &)

bool	AddRequiredInputName (const DataObjectIdentifierType &)

bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

void	AddOptionalInputName (const DataObjectIdentifierType &)

void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

DataObject *	GetOutput (const DataObjectIdentifierType &key)

const DataObject *	GetOutput (const DataObjectIdentifierType &key) const

virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryOutputName () const

DataObject *	GetOutput (DataObjectPointerArraySizeType i)

const DataObject *	GetOutput (DataObjectPointerArraySizeType i) const

virtual void	SetOutput (const DataObjectIdentifierType &name, DataObject *output)

virtual void	RemoveOutput (const DataObjectIdentifierType &key)

DataObject *	GetPrimaryOutput ()

const DataObject *	GetPrimaryOutput () const

virtual void	SetPrimaryOutput (DataObject *object)

virtual void	SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)

virtual void	AddOutput (DataObject *output)

virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)

virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const

void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)

DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const

DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const

DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const

DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const

bool	IsIndexedInputName (const DataObjectIdentifierType &) const

bool	IsIndexedOutputName (const DataObjectIdentifierType &) const

virtual void	VerifyPreconditions () ITKv5_CONST

virtual void	GenerateOutputRequestedRegion (DataObject *output)

virtual void	GenerateOutputInformation ()

virtual void	PropagateResetPipeline ()

virtual void	ReleaseInputs ()

virtual void	CacheInputReleaseDataFlags ()

virtual void	RestoreInputReleaseDataFlags ()

virtual bool	GetThreaderUpdateProgress () const

virtual void	ThreaderUpdateProgressOn ()

virtual void	ThreaderUpdateProgressOff ()

virtual void	SetThreaderUpdateProgress (bool arg)

Protected Member Functions inherited from itk::Object
	Object ()

	~Object () override

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBase *	GetGlobalDefaultSplitter ()

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	ThreaderCallback (void *arg)

Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float	progressFixedToFloat (uint32_t fixed)

static uint32_t	progressFloatToFixed (float f)

Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool	m_DynamicMultiThreading

Protected Attributes inherited from itk::ProcessObject
bool	m_Updating

TimeStamp	m_OutputInformationMTime

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount

Detailed Description

template<typename TInputImage, typename TOutputImage = TInputImage>
class itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >

Finds the threshold value of an image based on maximizing the number of objects in the image that are larger than a given minimal size.

: This method is based on Topological Stable State Thresholding to calculate the threshold set point. This method is particularly effective when there are a large number of objects in a microscopy image. Compiling in Debug mode and enable the debug flag for this filter to print debug information to see how the filter focuses in on a threshold value. Please see the Insight Journal's MICCAI 2005 workshop for a complete description. References are below.

Parameters: The MinimumObjectSizeInPixels parameter is controlled through the class Get/SetMinimumObjectSizeInPixels() method. Similar to the standard itk::BinaryThresholdImageFilter the Get/SetInside and Get/SetOutside values of the threshold can be set. The GetNumberOfObjects() and GetThresholdValue() methods return the number of objects above the minimum pixel size and the calculated threshold value.

Automatic Thresholding in ITK: There are multiple methods to automatically calculate the threshold intensity value of an image. As of version 4.0, ITK has a Thresholding ( ITKThresholding ) module which contains numerous automatic thresholding methods.implements two of these. Topological Stable State Thresholding works well on images with a large number of objects to be counted.

References:: 1) Urish KL, August J, Huard J. "Unsupervised segmentation for myofiber counting in immunoflourescent microscopy images". Insight Journal. ISC/NA-MIC/MICCAI Workshop on Open-Source Software (2005) http://insight-journal.org/browse/publication/40 2) Pikaz A, Averbuch, A. "Digital image thresholding based on topological stable-state". Pattern Recognition, 29(5): 829-843, 1996.

: Questions: email Ken Urish at ken.urish(at)gmail.com Please cc the itk list serve for archival purposes.

Definition at line 74 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

Member Typedef Documentation

◆ ConnectedFilterType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::ConnectedFilterType = ConnectedComponentImageFilter<OutputImageType, FilterImageType>

private

Some additional type alias.

Definition at line 188 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ ConstPointer

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::ConstPointer = SmartPointer<const Self>

Definition at line 84 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ FilterImagePointer

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::FilterImagePointer = typename FilterImageType::Pointer

private

Some additional type alias.

Definition at line 178 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ FilterImageType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::FilterImageType = itk::Image<FilterPixelType, Self::ImageDimension>

private

Some additional type alias.

Definition at line 176 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ FilterPixelType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::FilterPixelType = unsigned int

private

Typedef for filter pixel type.

Definition at line 172 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ InputImagePixelType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::InputImagePixelType = typename InputImageType::PixelType

Some additional type alias.

Definition at line 146 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ InputImagePointer

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::InputImagePointer = typename InputImageType::ConstPointer

Some additional type alias.

Definition at line 144 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ InputImageRegionType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::InputImageRegionType = typename InputImageType::RegionType

Some additional type alias.

Definition at line 145 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ InputImageType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::InputImageType = TInputImage

Some additional type alias.

Definition at line 143 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ MinMaxCalculatorType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::MinMaxCalculatorType = MinimumMaximumImageCalculator<InputImageType>

private

Some additional type alias.

Definition at line 198 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ OutputImagePixelType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::OutputImagePixelType = typename OutputImageType::PixelType

Some additional type alias.

Definition at line 152 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ OutputImagePointer

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::OutputImagePointer = typename OutputImageType::Pointer

Some additional type alias.

Definition at line 150 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ OutputImageRegionType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::OutputImageRegionType = typename OutputImageType::RegionType

Some additional type alias.

Definition at line 151 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ OutputImageType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::OutputImageType = TOutputImage

Some additional type alias.

Definition at line 149 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ OutputPixelType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::OutputPixelType = typename TOutputImage::PixelType

Definition at line 94 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ PixelType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::PixelType = typename TInputImage::PixelType

Typedef to describe the type of pixel.

Definition at line 93 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ Pointer

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::Pointer = SmartPointer<Self>

Definition at line 83 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ RelabelFilterType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::RelabelFilterType = RelabelComponentImageFilter<FilterImageType, FilterImageType>

private

Some additional type alias.

Definition at line 193 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ Self

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::Self = ThresholdMaximumConnectedComponentsImageFilter

Standard class type aliases.

Definition at line 81 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ Superclass

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::Superclass = ImageToImageFilter<TInputImage, TOutputImage>

Definition at line 82 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

◆ ThresholdFilterType

template<typename TInputImage , typename TOutputImage = TInputImage>

using itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::ThresholdFilterType = BinaryThresholdImageFilter<InputImageType, OutputImageType>

private

Some additional type alias.

Definition at line 183 of file itkThresholdMaximumConnectedComponentsImageFilter.h.

Constructor & Destructor Documentation

◆ ThresholdMaximumConnectedComponentsImageFilter()

template<typename TInputImage , typename TOutputImage = TInputImage>

itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::ThresholdMaximumConnectedComponentsImageFilter ( )

protected

Some additional type alias.

◆ ~ThresholdMaximumConnectedComponentsImageFilter()

template<typename TInputImage , typename TOutputImage = TInputImage>

itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::~ThresholdMaximumConnectedComponentsImageFilter ( )

overrideprotecteddefault

Some additional type alias.

Member Function Documentation

◆ ComputeConnectedComponents()

template<typename TInputImage , typename TOutputImage = TInputImage>

SizeValueType itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::ComputeConnectedComponents ( )

protected

Runs a series of filters that thresholds the image, dilates/erodes for edge enhancement, and counts the number of relabeled connected components

◆ CreateAnother()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual::itk::LightObject::Pointer itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

◆ GenerateData()

template<typename TInputImage , typename TOutputImage = TInputImage>

void itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GenerateData ( )

overrideprotectedvirtual

Some additional type alias.

Reimplemented from itk::ImageSource< TOutputImage >.

◆ GetInsideValue()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual OutputPixelType itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetInsideValue ( ) const

virtual

Some additional type alias.

◆ GetMinimumObjectSizeInPixels()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual unsigned int itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetMinimumObjectSizeInPixels ( ) const

virtual

Some additional type alias.

◆ GetNameOfClass()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual const char* itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

◆ GetNumberOfObjects()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual SizeValueType itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetNumberOfObjects ( ) const

virtual

Returns the number of objects in the image. This information is only valid after the filter has executed. Useful if your counting something

◆ GetOutsideValue()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual OutputPixelType itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetOutsideValue ( ) const

virtual

Some additional type alias.

◆ GetThresholdValue()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual PixelType itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetThresholdValue ( ) const

virtual

Returns the automatic threshold setpoint. This information is only valid after the filter has executed.

◆ GetUpperBoundary()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual PixelType itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::GetUpperBoundary ( ) const

virtual

Some additional type alias.

◆ New()

template<typename TInputImage , typename TOutputImage = TInputImage>

static Pointer itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::New ( )

static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TInputImage , typename TOutputImage = TInputImage>

void itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Some additional type alias.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

◆ SetInsideValue()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual void itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::SetInsideValue ( OutputPixelType _arg )

virtual

The following Set/Get methods are for the binary threshold function. This class automatically calculates the lower threshold boundary. The upper threshold boundary, inside value, and outside value can be defined by the user, however the standard values are used as default if not set by the user. The default value of the: Inside value is the maximum pixel type intensity. Outside value is the minimum pixel type intensity. Upper threshold boundary is the maximum pixel type intensity.

◆ SetMinimumObjectSizeInPixels()

template<typename TInputImage , typename TOutputImage = TInputImage>

virtual void itk::ThresholdMaximumConnectedComponentsImageFilter< TInputImage, TOutputImage >::SetMinimumObjectSizeInPixels ( unsigned int _arg )

virtual

The pixel type must support comparison operators. Set the minimum pixel area used to count objects on the image. Thus, only objects that have a pixel area greater than the minimum pixel area will be counted as an object in the optimization portion of this filter. Essentially, it eliminates noise from being counted as an object. The default value is zero.