ITK
5.2.0
Insight Toolkit
|
#include <itkTimeVaryingBSplineVelocityFieldTransform.h>
Public Types | |
using | ConstPointer = SmartPointer< const Self > |
using | DerivativeType = typename Superclass::DerivativeType |
using | DisplacementFieldDirectionType = typename DisplacementFieldType::DirectionType |
using | DisplacementFieldPointType = typename DisplacementFieldType::PointType |
using | DisplacementFieldSizeType = typename DisplacementFieldType::SizeType |
using | DisplacementFieldSpacingType = typename DisplacementFieldType::SpacingType |
using | DisplacementFieldType = typename Superclass::DisplacementFieldType |
using | DisplacementVectorType = typename DisplacementFieldType::PixelType |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | FixedParametersValueType = typename FixedParametersType::ValueType |
using | InterpolatorType = typename Superclass::InterpolatorType |
using | InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer |
using | NumberOfParametersType = typename Superclass::NumberOfParametersType |
using | ParametersType = typename Superclass::ParametersType |
using | ParametersValueType = typename ParametersType::ValueType |
using | Pointer = SmartPointer< Self > |
using | ScalarType = typename Superclass::ScalarType |
using | Self = TimeVaryingBSplineVelocityFieldTransform |
using | Superclass = VelocityFieldTransform< TParametersValueType, NDimensions > |
using | TimeVaryingVelocityFieldControlPointLatticePointer = typename VelocityFieldType::Pointer |
using | TimeVaryingVelocityFieldControlPointLatticeType = VelocityFieldType |
using | VelocityFieldDirectionType = typename VelocityFieldType::DirectionType |
using | VelocityFieldIntegratorType = typename Superclass::VelocityFieldInterpolatorType |
using | VelocityFieldPointType = typename VelocityFieldType::PointType |
using | VelocityFieldSizeType = typename VelocityFieldType::SizeType |
using | VelocityFieldSpacingType = typename VelocityFieldType::SpacingType |
using | VelocityFieldType = typename Superclass::VelocityFieldType |
Public Types inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions > | |
using | ConstPointer = SmartPointer< const Self > |
using | DerivativeType = typename Superclass::DerivativeType |
using | DirectionType = typename VelocityFieldType::DirectionType |
using | DisplacementFieldPointer = typename DisplacementFieldType::Pointer |
using | DisplacementFieldType = typename Superclass::DisplacementFieldType |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | FixedParametersValueType = typename Superclass::FixedParametersValueType |
using | IndexType = typename VelocityFieldType::IndexType |
using | InputPointType = typename Superclass::InputPointType |
using | InputVectorPixelType = typename Superclass::InputVectorPixelType |
using | InputVectorType = typename Superclass::InputVectorType |
using | InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer |
using | NumberOfParametersType = typename Superclass::NumberOfParametersType |
using | OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper< ScalarType, Dimension, VelocityFieldDimension > |
using | OutputPointType = typename Superclass::OutputPointType |
using | OutputVectorPixelType = typename Superclass::OutputVectorPixelType |
using | OutputVectorType = typename Superclass::OutputVectorType |
using | ParametersType = typename Superclass::ParametersType |
using | ParametersValueType = typename Superclass::ParametersValueType |
using | PixelType = typename VelocityFieldType::PixelType |
using | Pointer = SmartPointer< Self > |
using | PointType = typename VelocityFieldType::PointType |
using | RegionType = typename VelocityFieldType::RegionType |
using | ScalarType = typename Superclass::ScalarType |
using | Self = VelocityFieldTransform |
using | SizeType = typename VelocityFieldType::SizeType |
using | SpacingType = typename VelocityFieldType::SpacingType |
using | Superclass = DisplacementFieldTransform< TParametersValueType, NDimensions > |
using | TransformCategoryEnum = typename Superclass::TransformCategoryEnum |
using | VelocityFieldInterpolatorPointer = typename VelocityFieldInterpolatorType::Pointer |
using | VelocityFieldInterpolatorType = VectorInterpolateImageFunction< VelocityFieldType, ScalarType > |
using | VelocityFieldPointer = typename VelocityFieldType::Pointer |
using | VelocityFieldType = Image< OutputVectorType, VelocityFieldDimension > |
Public Types inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions > | |
using | ConstPointer = SmartPointer< const Self > |
using | DerivativeType = typename Superclass::DerivativeType |
using | DirectionType = typename DisplacementFieldType::DirectionType |
using | DisplacementFieldConstPointer = typename DisplacementFieldType::ConstPointer |
using | DisplacementFieldPointer = typename DisplacementFieldType::Pointer |
using | DisplacementFieldType = Image< OutputVectorType, Dimension > |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | FixedParametersValueType = typename Superclass::FixedParametersValueType |
using | IndexType = typename DisplacementFieldType::IndexType |
using | InputCovariantVectorType = typename Superclass::InputCovariantVectorType |
using | InputDiffusionTensor3DType = typename Superclass::InputDiffusionTensor3DType |
using | InputPointType = typename Superclass::InputPointType |
using | InputTensorEigenVectorType = CovariantVector< ScalarType, InputDiffusionTensor3DType::Dimension > |
using | InputVectorPixelType = typename Superclass::InputVectorPixelType |
using | InputVectorType = typename Superclass::InputVectorType |
using | InputVnlVectorType = typename Superclass::InputVnlVectorType |
using | InterpolatorType = VectorInterpolateImageFunction< DisplacementFieldType, ScalarType > |
using | InverseJacobianPositionType = typename Superclass::InverseJacobianPositionType |
using | InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer |
using | JacobianPositionType = typename Superclass::JacobianPositionType |
using | JacobianType = typename Superclass::JacobianType |
using | NumberOfParametersType = typename Superclass::NumberOfParametersType |
using | OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper< ScalarType, OutputVectorType::Dimension, Dimension > |
using | OutputCovariantVectorType = typename Superclass::OutputCovariantVectorType |
using | OutputDiffusionTensor3DType = typename Superclass::OutputDiffusionTensor3DType |
using | OutputPointType = typename Superclass::OutputPointType |
using | OutputTensorEigenVectorType = CovariantVector< ScalarType, OutputDiffusionTensor3DType::Dimension > |
using | OutputVectorPixelType = typename Superclass::OutputVectorPixelType |
using | OutputVectorType = typename Superclass::OutputVectorType |
using | OutputVnlVectorType = typename Superclass::OutputVnlVectorType |
using | ParametersType = typename Superclass::ParametersType |
using | ParametersValueType = typename Superclass::ParametersValueType |
using | PixelType = typename DisplacementFieldType::PixelType |
using | Pointer = SmartPointer< Self > |
using | PointType = typename DisplacementFieldType::PointType |
using | RegionType = typename DisplacementFieldType::RegionType |
using | ScalarType = typename Superclass::ScalarType |
using | Self = DisplacementFieldTransform |
using | SizeType = typename DisplacementFieldType::SizeType |
using | SpacingType = typename DisplacementFieldType::SpacingType |
using | Superclass = Transform< TParametersValueType, NDimensions, NDimensions > |
using | TransformCategoryEnum = typename Superclass::TransformCategoryEnum |
Public Types inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions > | |
using | ConstPointer = SmartPointer< const Self > |
using | DerivativeType = Array< ParametersValueType > |
using | DirectionChangeMatrix = Matrix< double, Self::OutputSpaceDimension, Self::InputSpaceDimension > |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | FixedParametersValueType = typename Superclass::FixedParametersValueType |
using | InputCovariantVectorType = CovariantVector< TParametersValueType, NInputDimensions > |
using | InputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType > |
using | InputDirectionMatrix = Matrix< double, Self::InputSpaceDimension, Self::InputSpaceDimension > |
using | InputPointType = Point< TParametersValueType, NInputDimensions > |
using | InputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NInputDimensions > |
using | InputVectorPixelType = VariableLengthVector< TParametersValueType > |
using | InputVectorType = Vector< TParametersValueType, NInputDimensions > |
using | InputVnlVectorType = vnl_vector_fixed< TParametersValueType, NInputDimensions > |
using | InverseJacobianPositionType = vnl_matrix_fixed< ParametersValueType, NInputDimensions, NOutputDimensions > |
using | InverseTransformBasePointer = typename InverseTransformBaseType::Pointer |
using | InverseTransformBaseType = Transform< TParametersValueType, NOutputDimensions, NInputDimensions > |
using | JacobianPositionType = vnl_matrix_fixed< ParametersValueType, NOutputDimensions, NInputDimensions > |
using | JacobianType = Array2D< ParametersValueType > |
using | MatrixType = Matrix< TParametersValueType, Self::OutputSpaceDimension, Self::InputSpaceDimension > |
using | NumberOfParametersType = typename Superclass::NumberOfParametersType |
using | OutputCovariantVectorType = CovariantVector< TParametersValueType, NOutputDimensions > |
using | OutputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType > |
using | OutputDirectionMatrix = Matrix< double, Self::OutputSpaceDimension, Self::OutputSpaceDimension > |
using | OutputPointType = Point< TParametersValueType, NOutputDimensions > |
using | OutputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NOutputDimensions > |
using | OutputVectorPixelType = VariableLengthVector< TParametersValueType > |
using | OutputVectorType = Vector< TParametersValueType, NOutputDimensions > |
using | OutputVnlVectorType = vnl_vector_fixed< TParametersValueType, NOutputDimensions > |
using | ParametersType = typename Superclass::ParametersType |
using | ParametersValueType = typename Superclass::ParametersValueType |
using | Pointer = SmartPointer< Self > |
using | ScalarType = ParametersValueType |
using | Self = Transform |
using | Superclass = TransformBaseTemplate< TParametersValueType > |
using | TransformCategoryEnum = typename Superclass::TransformCategoryEnum |
Public Types inherited from itk::TransformBaseTemplate< TParametersValueType > | |
using | ConstPointer = SmartPointer< const Self > |
using | FixedParametersType = OptimizerParameters< FixedParametersValueType > |
using | FixedParametersValueType = double |
using | NumberOfParametersType = IdentifierType |
using | ParametersType = OptimizerParameters< ParametersValueType > |
using | ParametersValueType = TParametersValueType |
using | Pointer = SmartPointer< Self > |
using | Self = TransformBaseTemplate |
using | Superclass = Object |
using | TransformCategoryEnum = TransformBaseTemplateEnums::TransformCategory |
Public Types inherited from itk::Object | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = Object |
using | Superclass = LightObject |
Public Types inherited from itk::LightObject | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = LightObject |
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::VelocityFieldTransform< TParametersValueType, NDimensions > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool val) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Integrate a time-varying velocity field represented by a B-spline control point lattice.
Diffeomorphisms are topology-preserving mappings that are useful for describing biologically plausible deformations. Mathematically, a diffeomorphism, , is generated from a time-varying velocity field, v, as described by the integral equation:
In typical registration applications it is computationally more efficient to sample the B-spline transform to its corresponding displacement field. Therefore, the user needs to specify the domain parameters of that displacement field using the following functions:
SetDisplacementFieldSpacing()
SetDisplacementFieldOrigin()
SetDisplacementFieldSize()
SetDisplacementFieldDirection()
It's important that these parameters match up with the fixed parameters of this transform which are defined as the parameters of the (N+1)-D B-spline grid representing the continuous velocity field. This control point lattice is set using SetTimeVaryingVelocityFieldControlPointLattice()
or it can be created by setting the fixed parameters.
Note: For readability of the code, it is important to note that we store the control point lattice in the m_VelocityField variable since they are of the same type. It's only when we call IntegrateVelocityField() that a sampled velocity field is created from the control point lattice.
Definition at line 68 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ConstPointer = SmartPointer<const Self> |
Definition at line 78 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DerivativeType = typename Superclass::DerivativeType |
Derivative type
Definition at line 108 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldDirectionType = typename DisplacementFieldType::DirectionType |
Definition at line 128 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldPointType = typename DisplacementFieldType::PointType |
Definition at line 127 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldSizeType = typename DisplacementFieldType::SizeType |
Definition at line 125 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldSpacingType = typename DisplacementFieldType::SpacingType |
Definition at line 126 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldType = typename Superclass::DisplacementFieldType |
Field types.
Definition at line 94 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementVectorType = typename DisplacementFieldType::PixelType |
Definition at line 124 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersType = typename Superclass::FixedParametersType |
Definition at line 103 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersValueType = typename FixedParametersType::ValueType |
Definition at line 104 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::InterpolatorType = typename Superclass::InterpolatorType |
Interpolator types.
Definition at line 90 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer |
InverseTransform type.
Definition at line 87 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::NumberOfParametersType = typename Superclass::NumberOfParametersType |
Definition at line 105 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ParametersType = typename Superclass::ParametersType |
Type of the input parameters.
Definition at line 101 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ParametersValueType = typename ParametersType::ValueType |
Definition at line 102 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Pointer = SmartPointer<Self> |
Definition at line 77 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::ScalarType = typename Superclass::ScalarType |
Scalar type.
Definition at line 98 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Self = TimeVaryingBSplineVelocityFieldTransform |
Standard class type aliases.
Definition at line 75 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::Superclass = VelocityFieldTransform<TParametersValueType, NDimensions> |
Definition at line 76 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::TimeVaryingVelocityFieldControlPointLatticePointer = typename VelocityFieldType::Pointer |
Definition at line 122 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::TimeVaryingVelocityFieldControlPointLatticeType = VelocityFieldType |
Definition at line 121 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldDirectionType = typename VelocityFieldType::DirectionType |
Definition at line 119 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldIntegratorType = typename Superclass::VelocityFieldInterpolatorType |
Definition at line 91 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldPointType = typename VelocityFieldType::PointType |
Definition at line 116 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldSizeType = typename VelocityFieldType::SizeType |
Definition at line 117 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldSpacingType = typename VelocityFieldType::SpacingType |
Definition at line 118 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
using itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldType = typename Superclass::VelocityFieldType |
Definition at line 95 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
protected |
Set/Get sampled velocity field origin
|
overrideprotecteddefault |
Set/Get sampled velocity field origin
|
virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.
|
virtual |
Run-time type information (and related methods).
Reimplemented from itk::VelocityFieldTransform< TParametersValueType, NDimensions >.
|
virtual |
Set/Get sampled velocity field origin
|
inline |
Get the time-varying velocity field control point lattice.
Definition at line 132 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
virtual |
Set/Get sampled velocity field origin
|
virtual |
Set/Get sampled velocity field origin
|
virtual |
Set/Get sampled velocity field origin
|
virtual |
Set/Get sampled velocity field origin
|
overridevirtual |
Trigger the computation of the displacement field by integrating the time-varying velocity field.
Reimplemented from itk::VelocityFieldTransform< TParametersValueType, NDimensions >.
|
static |
New macro for creation of through a Smart Pointer
|
overrideprotectedvirtual |
Set/Get sampled velocity field origin
Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.
|
virtual |
Set/Get the spline order.
|
inlinevirtual |
Set the time-varying velocity field control point lattice.
Definition at line 139 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
virtual |
Set/Get sampled velocity field direction
|
virtual |
Set/Get sampled velocity field origin
|
virtual |
Set/Get sampled velocity field size
|
virtual |
Set/Get sampled velocity field spacing
|
override |
Update the transform's parameters by the adding values in update
to current parameter values. We assume update
is of the same length as Parameters. Throw exception otherwise. factor
is a scalar multiplier for each value in update. SetParameters is called at the end of this method, to allow transforms to perform any required operations on the update parameters, typically a conversion to member variables for use in TransformPoint.
|
staticconstexpr |
Dimension of the domain spaces.
Definition at line 111 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
private |
Set/Get sampled velocity field origin
Definition at line 190 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
private |
Set/Get sampled velocity field origin
Definition at line 191 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
private |
Set/Get sampled velocity field origin
Definition at line 195 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
private |
Set/Get sampled velocity field origin
Definition at line 193 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
private |
Set/Get sampled velocity field origin
Definition at line 196 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
private |
Set/Get sampled velocity field origin
Definition at line 194 of file itkTimeVaryingBSplineVelocityFieldTransform.h.
|
staticconstexpr |
Dimension of the time varying velocity field.
Definition at line 114 of file itkTimeVaryingBSplineVelocityFieldTransform.h.