itk::VelocityFieldTransform< TParametersValueType, NDimensions > Class Template Reference

#include <itkVelocityFieldTransform.h>

Inheritance diagram for itk::VelocityFieldTransform< TParametersValueType, NDimensions >:

Collaboration diagram for itk::VelocityFieldTransform< TParametersValueType, NDimensions >:

Public Types
using	ConstPointer = SmartPointer< const Self >
using	DerivativeType = typename Superclass::DerivativeType
using	DirectionType = typename VelocityFieldType::DirectionType
using	DisplacementFieldPointer = typename DisplacementFieldType::Pointer
using	DisplacementFieldType = typename Superclass::DisplacementFieldType
using	FixedParametersType = typename Superclass::FixedParametersType
using	FixedParametersValueType = typename Superclass::FixedParametersValueType
using	IndexType = typename VelocityFieldType::IndexType
using	InputPointType = typename Superclass::InputPointType
using	InputVectorPixelType = typename Superclass::InputVectorPixelType
using	InputVectorType = typename Superclass::InputVectorType
using	InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer
using	NumberOfParametersType = typename Superclass::NumberOfParametersType
using	OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper< ScalarType, Dimension, VelocityFieldDimension >
using	OutputPointType = typename Superclass::OutputPointType
using	OutputVectorPixelType = typename Superclass::OutputVectorPixelType
using	OutputVectorType = typename Superclass::OutputVectorType
using	ParametersType = typename Superclass::ParametersType
using	ParametersValueType = typename Superclass::ParametersValueType
using	PixelType = typename VelocityFieldType::PixelType
using	Pointer = SmartPointer< Self >
using	PointType = typename VelocityFieldType::PointType
using	RegionType = typename VelocityFieldType::RegionType
using	ScalarType = typename Superclass::ScalarType
using	Self = VelocityFieldTransform
using	SizeType = typename VelocityFieldType::SizeType
using	SpacingType = typename VelocityFieldType::SpacingType
using	Superclass = DisplacementFieldTransform< TParametersValueType, NDimensions >
using	TransformCategoryEnum = typename Superclass::TransformCategoryEnum
using	VelocityFieldInterpolatorPointer = typename VelocityFieldInterpolatorType::Pointer
using	VelocityFieldInterpolatorType = VectorInterpolateImageFunction< VelocityFieldType, ScalarType >
using	VelocityFieldPointer = typename VelocityFieldType::Pointer
using	VelocityFieldType = Image< OutputVectorType, VelocityFieldDimension >
Public Types inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
using	ConstPointer = SmartPointer< const Self >
using	DerivativeType = typename Superclass::DerivativeType
using	DirectionType = typename DisplacementFieldType::DirectionType
using	DisplacementFieldConstPointer = typename DisplacementFieldType::ConstPointer
using	DisplacementFieldPointer = typename DisplacementFieldType::Pointer
using	DisplacementFieldType = Image< OutputVectorType, Dimension >
using	FixedParametersType = typename Superclass::FixedParametersType
using	FixedParametersValueType = typename Superclass::FixedParametersValueType
using	IndexType = typename DisplacementFieldType::IndexType
using	InputCovariantVectorType = typename Superclass::InputCovariantVectorType
using	InputDiffusionTensor3DType = typename Superclass::InputDiffusionTensor3DType
using	InputPointType = typename Superclass::InputPointType
using	InputTensorEigenVectorType = CovariantVector< ScalarType, InputDiffusionTensor3DType::Dimension >
using	InputVectorPixelType = typename Superclass::InputVectorPixelType
using	InputVectorType = typename Superclass::InputVectorType
using	InputVnlVectorType = typename Superclass::InputVnlVectorType
using	InterpolatorType = VectorInterpolateImageFunction< DisplacementFieldType, ScalarType >
using	InverseJacobianPositionType = typename Superclass::InverseJacobianPositionType
using	InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer
using	JacobianPositionType = typename Superclass::JacobianPositionType
using	JacobianType = typename Superclass::JacobianType
using	NumberOfParametersType = typename Superclass::NumberOfParametersType
using	OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper< ScalarType, OutputVectorType::Dimension, Dimension >
using	OutputCovariantVectorType = typename Superclass::OutputCovariantVectorType
using	OutputDiffusionTensor3DType = typename Superclass::OutputDiffusionTensor3DType
using	OutputPointType = typename Superclass::OutputPointType
using	OutputTensorEigenVectorType = CovariantVector< ScalarType, OutputDiffusionTensor3DType::Dimension >
using	OutputVectorPixelType = typename Superclass::OutputVectorPixelType
using	OutputVectorType = typename Superclass::OutputVectorType
using	OutputVnlVectorType = typename Superclass::OutputVnlVectorType
using	ParametersType = typename Superclass::ParametersType
using	ParametersValueType = typename Superclass::ParametersValueType
using	PixelType = typename DisplacementFieldType::PixelType
using	Pointer = SmartPointer< Self >
using	PointType = typename DisplacementFieldType::PointType
using	RegionType = typename DisplacementFieldType::RegionType
using	ScalarType = typename Superclass::ScalarType
using	Self = DisplacementFieldTransform
using	SizeType = typename DisplacementFieldType::SizeType
using	SpacingType = typename DisplacementFieldType::SpacingType
using	Superclass = Transform< TParametersValueType, NDimensions, NDimensions >
using	TransformCategoryEnum = typename Superclass::TransformCategoryEnum
Public Types inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
using	ConstPointer = SmartPointer< const Self >
using	DerivativeType = Array< ParametersValueType >
using	DirectionChangeMatrix = Matrix< double, Self::OutputSpaceDimension, Self::InputSpaceDimension >
using	FixedParametersType = typename Superclass::FixedParametersType
using	FixedParametersValueType = typename Superclass::FixedParametersValueType
using	InputCovariantVectorType = CovariantVector< TParametersValueType, NInputDimensions >
using	InputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType >
using	InputDirectionMatrix = Matrix< double, Self::InputSpaceDimension, Self::InputSpaceDimension >
using	InputPointType = Point< TParametersValueType, NInputDimensions >
using	InputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NInputDimensions >
using	InputVectorPixelType = VariableLengthVector< TParametersValueType >
using	InputVectorType = Vector< TParametersValueType, NInputDimensions >
using	InputVnlVectorType = vnl_vector_fixed< TParametersValueType, NInputDimensions >
using	InverseJacobianPositionType = vnl_matrix_fixed< ParametersValueType, NInputDimensions, NOutputDimensions >
using	InverseTransformBasePointer = typename InverseTransformBaseType::Pointer
using	InverseTransformBaseType = Transform< TParametersValueType, NOutputDimensions, NInputDimensions >
using	JacobianPositionType = vnl_matrix_fixed< ParametersValueType, NOutputDimensions, NInputDimensions >
using	JacobianType = Array2D< ParametersValueType >
using	MatrixType = Matrix< TParametersValueType, Self::OutputSpaceDimension, Self::InputSpaceDimension >
using	NumberOfParametersType = typename Superclass::NumberOfParametersType
using	OutputCovariantVectorType = CovariantVector< TParametersValueType, NOutputDimensions >
using	OutputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType >
using	OutputDirectionMatrix = Matrix< double, Self::OutputSpaceDimension, Self::OutputSpaceDimension >
using	OutputPointType = Point< TParametersValueType, NOutputDimensions >
using	OutputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NOutputDimensions >
using	OutputVectorPixelType = VariableLengthVector< TParametersValueType >
using	OutputVectorType = Vector< TParametersValueType, NOutputDimensions >
using	OutputVnlVectorType = vnl_vector_fixed< TParametersValueType, NOutputDimensions >
using	ParametersType = typename Superclass::ParametersType
using	ParametersValueType = typename Superclass::ParametersValueType
using	Pointer = SmartPointer< Self >
using	ScalarType = ParametersValueType
using	Self = Transform
using	Superclass = TransformBaseTemplate< TParametersValueType >
using	TransformCategoryEnum = typename Superclass::TransformCategoryEnum
Public Types inherited from itk::TransformBaseTemplate< TParametersValueType >
using	ConstPointer = SmartPointer< const Self >
using	FixedParametersType = OptimizerParameters< FixedParametersValueType >
using	FixedParametersValueType = double
using	NumberOfParametersType = IdentifierType
using	ParametersType = OptimizerParameters< ParametersValueType >
using	ParametersValueType = TParametersValueType
using	Pointer = SmartPointer< Self >
using	Self = TransformBaseTemplate
using	Superclass = Object
using	TransformCategoryEnum = TransformBaseTemplateEnums::TransformCategory
Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = Object
using	Superclass = LightObject
Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const
virtual const char *	GetNameOfClass () const
Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
virtual DisplacementFieldType *	GetModifiableDisplacementField ()
virtual const DisplacementFieldType *	GetDisplacementField () const
virtual void	SetInverseDisplacementField (DisplacementFieldType *inverseField)
virtual DisplacementFieldType *	GetModifiableInverseDisplacementField ()
virtual const DisplacementFieldType *	GetInverseDisplacementField () const
virtual void	SetInterpolator (InterpolatorType *interpolator)
virtual InterpolatorType *	GetModifiableInterpolator ()
virtual const InterpolatorType *	GetInterpolator () const
virtual void	SetInverseInterpolator (InterpolatorType *interpolator)
virtual InterpolatorType *	GetModifiableInverseInterpolator ()
virtual const InterpolatorType *	GetInverseInterpolator () const
virtual const ModifiedTimeType &	GetDisplacementFieldSetTime () const
OutputPointType	TransformPoint (const InputPointType &inputPoint) const override
OutputVectorType	TransformVector (const InputVectorType &) const override
OutputVectorPixelType	TransformVector (const InputVectorPixelType &) const override
OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const override
OutputDiffusionTensor3DType	TransformDiffusionTensor (const InputDiffusionTensor3DType &) const
OutputVectorPixelType	TransformDiffusionTensor (const InputVectorPixelType &) const
OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const override
OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &) const override
void	SetParameters (const ParametersType &params) override
void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &j) const override
virtual void	ComputeJacobianWithRespectToParameters (const IndexType &, JacobianType &j) const
void	ComputeJacobianWithRespectToPosition (const InputPointType &point, JacobianPositionType &jacobian) const override
void	ComputeInverseJacobianWithRespectToPosition (const InputPointType &point, InverseJacobianPositionType &jacobian) const override
virtual void	ComputeJacobianWithRespectToPosition (const IndexType &index, JacobianPositionType &jacobian) const
virtual void	GetInverseJacobianOfForwardFieldWithRespectToPosition (const InputPointType &point, JacobianPositionType &jacobian, bool useSVD=false) const
virtual void	GetInverseJacobianOfForwardFieldWithRespectToPosition (const IndexType &index, JacobianPositionType &jacobian, bool useSVD=false) const
void	UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override
bool	GetInverse (Self *inverse) const
virtual void	SetIdentity ()
TransformCategoryEnum	GetTransformCategory () const override
NumberOfParametersType	GetNumberOfLocalParameters () const override
virtual void	SetCoordinateTolerance (double _arg)
virtual double	GetCoordinateTolerance () const
virtual void	SetDirectionTolerance (double _arg)
virtual double	GetDirectionTolerance () const
Public Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
void	CopyInFixedParameters (const FixedParametersValueType *const begin, const FixedParametersValueType *const end) override
void	CopyInParameters (const ParametersValueType *const begin, const ParametersValueType *const end) override
const FixedParametersType &	GetFixedParameters () const override
unsigned int	GetInputSpaceDimension () const override
bool	GetInverse (Self *) const
virtual NumberOfParametersType	GetNumberOfFixedParameters () const
NumberOfParametersType	GetNumberOfParameters () const override
unsigned int	GetOutputSpaceDimension () const override
const ParametersType &	GetParameters () const override
TransformCategoryEnum	GetTransformCategory () const override
std::string	GetTransformTypeAsString () const override
virtual bool	IsLinear () const
	itkCloneMacro (Self)
void	SetParametersByValue (const ParametersType &p) override
virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const
virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &vector, const InputPointType &point) const
virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &) const
virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &vector, const InputPointType &point) const
virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &) const
virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &inputTensor, const InputPointType &point) const
virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &) const
virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &inputTensor, const InputPointType &point) const
virtual OutputPointType	TransformPoint (const InputPointType &) const=0
virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &) const
virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &inputTensor, const InputPointType &point) const
virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &) const
virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &inputTensor, const InputPointType &point) const
virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &) const
virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &vector, const InputPointType &point) const
virtual OutputVectorType	TransformVector (const InputVectorType &) const
virtual OutputVectorType	TransformVector (const InputVectorType &vector, const InputPointType &point) const
virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const
virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &vector, const InputPointType &point) const
virtual void	UpdateTransformParameters (const DerivativeType &update, ParametersValueType factor=1.0)
virtual void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const=0
virtual void	ComputeJacobianWithRespectToParametersCachedTemporaries (const InputPointType &p, JacobianType &jacobian, JacobianType &) const
virtual void	ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianPositionType &) const
	itkLegacyMacro (virtual void ComputeJacobianWithRespectToPosition(const InputPointType &x, JacobianType &jacobian) const)
	itkLegacyMacro (virtual void ComputeInverseJacobianWithRespectToPosition(const InputPointType &x, JacobianType &jacobian) const)
virtual void	ComputeInverseJacobianWithRespectToPosition (const InputPointType &pnt, InverseJacobianPositionType &jacobian) const
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary ()
const MetaDataDictionary &	GetMetaDataDictionary () const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
void	Register () const override
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetReferenceCount (int) override
void	UnRegister () const noexcept override
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)
virtual void	SetObjectName (std::string _arg)
virtual const std::string &	GetObjectName () const
Public Member Functions inherited from itk::LightObject
Pointer	Clone () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
static Pointer	New ()
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool val)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	Dimension = NDimensions
static constexpr unsigned int	VelocityFieldDimension = NDimensions + 1
Static Public Attributes inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
static constexpr unsigned int	Dimension = NDimensions
Static Public Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
static constexpr unsigned int	InputSpaceDimension
static constexpr unsigned int	OutputSpaceDimension
ScalarType	m_LowerTimeBound
ScalarType	m_UpperTimeBound
unsigned int	m_NumberOfIntegrationSteps
VelocityFieldPointer	m_VelocityField
VelocityFieldInterpolatorType::Pointer	m_VelocityFieldInterpolator
unsigned long	m_VelocityFieldSetTime
virtual void	SetVelocityField (VelocityFieldType *)
virtual VelocityFieldType *	GetModifiableVelocityField ()
virtual const VelocityFieldType *	GetVelocityField () const
void	SetFixedParameters (const FixedParametersType &) override
virtual void	SetVelocityFieldInterpolator (VelocityFieldInterpolatorType *)
virtual VelocityFieldInterpolatorType *	GetModifiableVelocityFieldInterpolator ()
virtual const VelocityFieldInterpolatorType *	GetVelocityFieldInterpolator () const
virtual const unsigned long &	GetVelocityFieldSetTime () const
void	SetDisplacementField (DisplacementFieldType *displacementField) override
void	UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0) override
bool	GetInverse (Self *inverse) const
InverseTransformBasePointer	GetInverseTransform () const override
virtual void	IntegrateVelocityField ()
virtual void	SetLowerTimeBound (ScalarType _arg)
virtual ScalarType	GetLowerTimeBound () const
virtual void	SetUpperTimeBound (ScalarType _arg)
virtual ScalarType	GetUpperTimeBound () const
virtual void	SetNumberOfIntegrationSteps (unsigned int _arg)
virtual unsigned int	GetNumberOfIntegrationSteps () const
	VelocityFieldTransform ()
	~VelocityFieldTransform () override=default
void	PrintSelf (std::ostream &os, Indent indent) const override
LightObject::Pointer	InternalClone () const override
DisplacementFieldType::Pointer	CopyDisplacementField (const DisplacementFieldType *) const
virtual void	SetFixedParametersFromVelocityField () const

Additional Inherited Members
Protected Member Functions inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
	DisplacementFieldTransform ()
	~DisplacementFieldTransform () override=default
Protected Member Functions inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
LightObject::Pointer	InternalClone () const override
	Transform ()
	Transform (NumberOfParametersType numberOfParameters)
	~Transform () override=default
OutputDiffusionTensor3DType	PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType &, const InverseJacobianPositionType &) const
Protected Member Functions inherited from itk::TransformBaseTemplate< TParametersValueType >
	TransformBaseTemplate ()=default
	~TransformBaseTemplate () override=default
Protected Member Functions inherited from itk::Object
	Object ()
	~Object () override
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &timeStamp)
Protected Member Functions inherited from itk::LightObject
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()
Protected Attributes inherited from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >
DisplacementFieldType::Pointer	m_DisplacementField
DisplacementFieldType::Pointer	m_InverseDisplacementField
InterpolatorType::Pointer	m_Interpolator
InterpolatorType::Pointer	m_InverseInterpolator
ModifiedTimeType	m_DisplacementFieldSetTime { 0 }
JacobianType	m_IdentityJacobian
Protected Attributes inherited from itk::Transform< TParametersValueType, NDimensions, NDimensions >
ParametersType	m_Parameters
FixedParametersType	m_FixedParameters
DirectionChangeMatrix	m_DirectionChange
Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount

Detailed Description

template<typename TParametersValueType, unsigned int NDimensions>
class itk::VelocityFieldTransform< TParametersValueType, NDimensions >

Provides local/dense/high-dimensionality transformation via a a velocity field.

Author

Nick Tustison

Brian Avants

Definition at line 36 of file itkVelocityFieldTransform.h.

Member Typedef Documentation

ConstPointer

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ConstPointer = SmartPointer<const Self>

Definition at line 45 of file itkVelocityFieldTransform.h.

DerivativeType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DerivativeType = typename Superclass::DerivativeType

Derivative type

Definition at line 83 of file itkVelocityFieldTransform.h.

DirectionType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DirectionType = typename VelocityFieldType::DirectionType

Definition at line 104 of file itkVelocityFieldTransform.h.

DisplacementFieldPointer

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldPointer = typename DisplacementFieldType::Pointer

Definition at line 93 of file itkVelocityFieldTransform.h.

DisplacementFieldType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::DisplacementFieldType = typename Superclass::DisplacementFieldType

Define the displacement field type and corresponding interpolator type.

Definition at line 92 of file itkVelocityFieldTransform.h.

FixedParametersType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersType = typename Superclass::FixedParametersType

Type of the input parameters.

Definition at line 60 of file itkVelocityFieldTransform.h.

FixedParametersValueType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::FixedParametersValueType = typename Superclass::FixedParametersValueType

Definition at line 61 of file itkVelocityFieldTransform.h.

IndexType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::IndexType = typename VelocityFieldType::IndexType

Standard types for the velocity Field

Definition at line 100 of file itkVelocityFieldTransform.h.

InputPointType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InputPointType = typename Superclass::InputPointType

Standard coordinate point type for this class.

Definition at line 72 of file itkVelocityFieldTransform.h.

InputVectorPixelType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InputVectorPixelType = typename Superclass::InputVectorPixelType

Definition at line 79 of file itkVelocityFieldTransform.h.

InputVectorType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InputVectorType = typename Superclass::InputVectorType

Standard vector type for this class.

Definition at line 76 of file itkVelocityFieldTransform.h.

InverseTransformBasePointer

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InverseTransformBasePointer = typename Superclass::InverseTransformBasePointer

InverseTransform type.

Definition at line 54 of file itkVelocityFieldTransform.h.

NumberOfParametersType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::NumberOfParametersType = typename Superclass::NumberOfParametersType

The number of parameters defining this transform.

Definition at line 69 of file itkVelocityFieldTransform.h.

OptimizerParametersHelperType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OptimizerParametersHelperType = ImageVectorOptimizerParametersHelper<ScalarType, Dimension, VelocityFieldDimension>

Define the internal parameter helper used to access the field

Definition at line 113 of file itkVelocityFieldTransform.h.

OutputPointType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OutputPointType = typename Superclass::OutputPointType

Definition at line 73 of file itkVelocityFieldTransform.h.

OutputVectorPixelType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OutputVectorPixelType = typename Superclass::OutputVectorPixelType

Definition at line 80 of file itkVelocityFieldTransform.h.

OutputVectorType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::OutputVectorType = typename Superclass::OutputVectorType

Definition at line 77 of file itkVelocityFieldTransform.h.

ParametersType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ParametersType = typename Superclass::ParametersType

Definition at line 62 of file itkVelocityFieldTransform.h.

ParametersValueType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ParametersValueType = typename Superclass::ParametersValueType

Definition at line 63 of file itkVelocityFieldTransform.h.

PixelType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::PixelType = typename VelocityFieldType::PixelType

Definition at line 106 of file itkVelocityFieldTransform.h.

Pointer

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Pointer = SmartPointer<Self>

Definition at line 44 of file itkVelocityFieldTransform.h.

PointType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::PointType = typename VelocityFieldType::PointType

Definition at line 105 of file itkVelocityFieldTransform.h.

RegionType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::RegionType = typename VelocityFieldType::RegionType

Definition at line 101 of file itkVelocityFieldTransform.h.

ScalarType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::ScalarType = typename Superclass::ScalarType

Scalar type.

Definition at line 57 of file itkVelocityFieldTransform.h.

Self

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Self = VelocityFieldTransform

Standard class type aliases.

Definition at line 42 of file itkVelocityFieldTransform.h.

SizeType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SizeType = typename VelocityFieldType::SizeType

Definition at line 102 of file itkVelocityFieldTransform.h.

SpacingType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SpacingType = typename VelocityFieldType::SpacingType

Definition at line 103 of file itkVelocityFieldTransform.h.

Superclass

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Superclass = DisplacementFieldTransform<TParametersValueType, NDimensions>

Definition at line 43 of file itkVelocityFieldTransform.h.

TransformCategoryEnum

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::TransformCategoryEnum = typename Superclass::TransformCategoryEnum

Transform category type.

Definition at line 66 of file itkVelocityFieldTransform.h.

VelocityFieldInterpolatorPointer

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldInterpolatorPointer = typename VelocityFieldInterpolatorType::Pointer

Definition at line 109 of file itkVelocityFieldTransform.h.

VelocityFieldInterpolatorType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldInterpolatorType = VectorInterpolateImageFunction<VelocityFieldType, ScalarType>

Definition at line 108 of file itkVelocityFieldTransform.h.

VelocityFieldPointer

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldPointer = typename VelocityFieldType::Pointer

Definition at line 97 of file itkVelocityFieldTransform.h.

VelocityFieldType

template<typename TParametersValueType , unsigned int NDimensions>

using itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldType = Image<OutputVectorType, VelocityFieldDimension>

Define the displacement field type and corresponding interpolator type.

Definition at line 96 of file itkVelocityFieldTransform.h.

Constructor & Destructor Documentation

VelocityFieldTransform()

template<typename TParametersValueType , unsigned int NDimensions>

itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldTransform ( )

protected

The interpolator.

~VelocityFieldTransform()

template<typename TParametersValueType , unsigned int NDimensions>

itk::VelocityFieldTransform< TParametersValueType, NDimensions >::~VelocityFieldTransform ( )

overrideprotecteddefault

The interpolator.

Member Function Documentation

CopyDisplacementField()

template<typename TParametersValueType , unsigned int NDimensions>

DisplacementFieldType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::CopyDisplacementField ( const DisplacementFieldType *  ) const

protected

The interpolator.

CreateAnother()

template<typename TParametersValueType , unsigned int NDimensions>

virtual::itk::LightObject::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

GetInverse()

template<typename TParametersValueType , unsigned int NDimensions>

bool itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetInverse

(

Self *

inverse

)

const

Return an inverse of this transform.

GetInverseTransform()

template<typename TParametersValueType , unsigned int NDimensions>

InverseTransformBasePointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetInverseTransform ( ) const

overridevirtual

Return an inverse of this transform.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

GetLowerTimeBound()

template<typename TParametersValueType , unsigned int NDimensions>

virtual ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetLowerTimeBound ( ) const

virtual

Get the lower time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

GetModifiableVelocityField()

template<typename TParametersValueType , unsigned int NDimensions>

virtual VelocityFieldType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetModifiableVelocityField ( )

virtual

The interpolator.

GetModifiableVelocityFieldInterpolator()

template<typename TParametersValueType , unsigned int NDimensions>

virtual VelocityFieldInterpolatorType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetModifiableVelocityFieldInterpolator ( )

virtual

The interpolator.

GetNameOfClass()

template<typename TParametersValueType , unsigned int NDimensions>

virtual const char* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >, itk::TimeVaryingVelocityFieldTransform< TParametersValueType, NDimensions >, and itk::GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform< TParametersValueType, NDimensions >.

GetNumberOfIntegrationSteps()

template<typename TParametersValueType , unsigned int NDimensions>

virtual unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetNumberOfIntegrationSteps ( ) const

virtual

Get the number of integration steps. Default = 100;

GetUpperTimeBound()

template<typename TParametersValueType , unsigned int NDimensions>

virtual ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetUpperTimeBound ( ) const

virtual

Get the upper time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

GetVelocityField()

template<typename TParametersValueType , unsigned int NDimensions>

virtual const VelocityFieldType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityField ( ) const

virtual

The interpolator.

GetVelocityFieldInterpolator()

template<typename TParametersValueType , unsigned int NDimensions>

virtual const VelocityFieldInterpolatorType* itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldInterpolator ( ) const

virtual

The interpolator.

GetVelocityFieldSetTime()

template<typename TParametersValueType , unsigned int NDimensions>

virtual const unsigned long& itk::VelocityFieldTransform< TParametersValueType, NDimensions >::GetVelocityFieldSetTime ( ) const

virtual

Get the modification time of velocity field

IntegrateVelocityField()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::IntegrateVelocityField ( )

inlinevirtual

Trigger the computation of the displacement field by integrating the velocity field.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldTransform< TParametersValueType, NDimensions >, and itk::TimeVaryingVelocityFieldTransform< TParametersValueType, NDimensions >.

Definition at line 167 of file itkVelocityFieldTransform.h.

InternalClone()

template<typename TParametersValueType , unsigned int NDimensions>

LightObject::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::InternalClone ( ) const

overrideprotectedvirtual

Clone the current transform

Reimplemented from itk::LightObject.

New()

template<typename TParametersValueType , unsigned int NDimensions>

static Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::New ( )

static

New macro for creation of through a Smart Pointer

PrintSelf()

template<typename TParametersValueType , unsigned int NDimensions>

void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

overrideprotectedvirtual

The interpolator.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

SetDisplacementField()

template<typename TParametersValueType , unsigned int NDimensions>

void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetDisplacementField ( DisplacementFieldType *  displacementField )

inlineoverridevirtual

Set the deformation field. We want to override the base class implementation since we don't want to optimize over the deformation field for this class but rather the time-varying velocity field

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

Definition at line 143 of file itkVelocityFieldTransform.h.

SetFixedParameters()

template<typename TParametersValueType , unsigned int NDimensions>

void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetFixedParameters ( const FixedParametersType &  )

overridevirtual

The interpolator.

Reimplemented from itk::DisplacementFieldTransform< TParametersValueType, NDimensions >.

SetFixedParametersFromVelocityField()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetFixedParametersFromVelocityField ( ) const

privatevirtual

Convenience method which reads the information from the current velocity field into m_FixedParameters.

SetLowerTimeBound()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetLowerTimeBound ( ScalarType  _arg )

virtual

Set the lower time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

SetNumberOfIntegrationSteps()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetNumberOfIntegrationSteps ( unsigned int  _arg )

virtual

Set the number of integration steps. Default = 100;

SetUpperTimeBound()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetUpperTimeBound ( ScalarType  _arg )

virtual

Set the upper time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1]

SetVelocityField()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityField ( VelocityFieldType *  )

virtual

Get/Set the velocity field. Set the displacement field. Create special set accessor to update interpolator and assign displacement field to transform parameters container.

SetVelocityFieldInterpolator()

template<typename TParametersValueType , unsigned int NDimensions>

virtual void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::SetVelocityFieldInterpolator ( VelocityFieldInterpolatorType *  )

virtual

Get/Set the interpolator. Create out own set accessor that assigns the velocity field

UpdateTransformParameters()

template<typename TParametersValueType , unsigned int NDimensions>

void itk::VelocityFieldTransform< TParametersValueType, NDimensions >::UpdateTransformParameters ( const DerivativeType &  update, ScalarType  factor = 1.0  )

override

The interpolator.

Member Data Documentation

Dimension

template<typename TParametersValueType , unsigned int NDimensions>

constexpr unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::Dimension = NDimensions

staticconstexpr

Dimension of the vector spaces.

Definition at line 89 of file itkVelocityFieldTransform.h.

m_LowerTimeBound

template<typename TParametersValueType , unsigned int NDimensions>

ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_LowerTimeBound

protected

The interpolator.

Definition at line 216 of file itkVelocityFieldTransform.h.

m_NumberOfIntegrationSteps

template<typename TParametersValueType , unsigned int NDimensions>

unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_NumberOfIntegrationSteps

protected

The interpolator.

Definition at line 219 of file itkVelocityFieldTransform.h.

m_UpperTimeBound

template<typename TParametersValueType , unsigned int NDimensions>

ScalarType itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_UpperTimeBound

protected

The interpolator.

Definition at line 217 of file itkVelocityFieldTransform.h.

m_VelocityField

template<typename TParametersValueType , unsigned int NDimensions>

VelocityFieldPointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityField

protected

The interpolator.

Definition at line 221 of file itkVelocityFieldTransform.h.

m_VelocityFieldInterpolator

template<typename TParametersValueType , unsigned int NDimensions>

VelocityFieldInterpolatorType::Pointer itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldInterpolator

protected

The interpolator.

Definition at line 224 of file itkVelocityFieldTransform.h.

m_VelocityFieldSetTime

template<typename TParametersValueType , unsigned int NDimensions>

unsigned long itk::VelocityFieldTransform< TParametersValueType, NDimensions >::m_VelocityFieldSetTime

protected

Track when the VELOCITY field was last set/assigned, as distinct from when it may have had its contents modified.

Definition at line 228 of file itkVelocityFieldTransform.h.

VelocityFieldDimension

template<typename TParametersValueType , unsigned int NDimensions>

constexpr unsigned int itk::VelocityFieldTransform< TParametersValueType, NDimensions >::VelocityFieldDimension = NDimensions + 1

staticconstexpr

Dimension of the velocity field .

Definition at line 86 of file itkVelocityFieldTransform.h.

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The documentation for this class was generated from the following file:

• itkVelocityFieldTransform.h