NeuroSurgSim/Tools: Difference between revisions

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'''[[NeuroSurgSim|Home|]]'''
'''[[NeuroSurgSim|Home]]'''
*[[NeuroSurgSim/Management|Project Management]]
*[[NeuroSurgSim/Management|Project Management]]
*[[NeuroSurgSim/TCon-Meetings|TCons/Meetings]]
*[[NeuroSurgSim/TCon-Meetings|TCons/Meetings]]
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*[[NeuroSurgSim/Sprint Accomplishments|Sprints]]
*[[NeuroSurgSim/Sprint Accomplishments|Sprints]]
*[[NeuroSurgSim/Tools|Tools]]
*[[NeuroSurgSim/Tools|Tools]]
*[[NeuroSurgSim/Demos|Demos]]
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= Tools used in different aspects of the simulation=
= Tools used for different aspects of the simulator=


== Segmentation==
== Segmentation==


1. [TubeTK](http://www.tubetk.org/) - Vessel extraction
1. [http://www.tubetk.org/ TubeTK] - Vessel extraction
2. [Slicer](http://www.slicer.org/) - Visualization and interface to TubeTK
3. [VMTK](http://www.vmtk.org/) - Another vessel extractor
4. [BET](http://fsl.fmrib.ox.ac.uk/fsl/fsl-4.1.9/bet2/index.html) - Brain extraction tool, part of FSL. Also, look https://github.com/ricortiz/BET for an easy to build executable.


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2. [http://www.slicer.org/ Slicer] - Visualization and interface to TubeTK
 
3. [http://www.vmtk.org/ VMTK] - Another vessel extractor
 
4. [http://fsl.fmrib.ox.ac.uk/fsl/fsl-4.1.9/bet2/index.html BET] - Brain extraction tool, part of FSL. Also, look https://github.com/ricortiz/BET for an easy to build executable.
 
5. [https://github.com/andinet/SOFA Main Repository] - Our SOFA Fork.

Latest revision as of 17:56, 15 September 2014

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Tools used for different aspects of the simulator

Segmentation

1. TubeTK - Vessel extraction

2. Slicer - Visualization and interface to TubeTK

3. VMTK - Another vessel extractor

4. BET - Brain extraction tool, part of FSL. Also, look https://github.com/ricortiz/BET for an easy to build executable.

5. Main Repository - Our SOFA Fork.