[Insight-users] How to use MetaImageImporter
Mathieu Malaterre
Mathieu.Malaterre@creatis.insa-lyon.fr
Mon, 07 Apr 2003 18:55:06 +0200
Haiwen,
Since ITK 1.2, InsightApplications have moved to there own directory:
InsigthApplications/ (and not insigth/Applications) that you can
download either from
http://itk.org/HTML/Download.php
of from CVS, just follow the instructions from:
http://itk.org/HTML/Applications.htm
HTH
mathieu
Haiwen Shi wrote:
> Hi, Luis;
>
> Thanks for your email. I think it is a good idea to
> use MetaImage header. However, when I looked for the
> directory
>
> Insight/Applications/MetaImageImporter
>
> I didn't find anything in it except a CVS directory.
> Do you mind to check it out and tell me where I can
> find the MetaImageImporter?
>
> Actually, I saw other people use Meta Image header,
> which looks like the following:
>
> NDims = 3
> DimSize = 181 217 180
> ElementType = MET_UCHAR
> ElementSpacing = 1.0 1.0 1.0
> ElementByteOrderMSB = False
> ElementDataFile = brainweb165a10f17.raw
>
>
> However, the data type of my image is double instead
> of unsigned char. Do you know what kind of
> 'ElementType' I should use? Is it a right meta header
> file?
>
> I will really appreciate if you give me more
> information about how to write a Mate Image header
> file.
>
> Thank you very much!
>
> Haiwen Shi
>
>
> --- Luis Ibanez <luis.ibanez@kitware.com> wrote:
>
>>HI Haiwen,
>>
>>As an alternative to Kent's detailed instructions
>>for
>>using RawImageIO, I would suggest you to consider
>>the
>>option of using a MetaImage header.
>>
>>This short text based header contains information
>>about
>>your binary file. For example: the origin, spacing
>>and
>>dimensions of the data. The header has the filename
>>of
>>the raw file, so it doesn't duplicate any
>>information.
>>
>>The easieast way to create a MetaImage header is to
>>use
>>the small application:
>>
>> MetaImageImporter
>>
>>available in
>>
>> InsightApplications/MetaImageImporter
>>
>>
>>Whenever you want to read your file, simply pass the
>>full filename of the MetaImage header to the
>>ImageFileReader.
>>In that way, the information of the raw file is not
>>hard coded in your program. The information is
>>specified in
>>this external file, allowing your program to work
>>with more
>>than one single file.
>>
>>
>> Luis
>>
>>
>>
>>------------------
>>Haiwen Shi wrote:
>>
>>>Hi, All;
>>>
>>>I want to use itk to read a MR image file that
>>>consists of only binary data(the data type is
>>
>>double),
>>
>>>not any header information in it. Some people
>>>suggested me to use RawImageIO to read the data
>>
>>file.
>>
>>>Can anybody tell me how to use this class? An
>>
>>example
>>
>>>will be perfect. Or if you have any other
>>
>>suggestion,
>>
>>>please let me know.
>>>
>>>I will really appreciate your help!
>>>
>>>Haiwen Shi
>>>
>>>__________________________________________________
>>>Do you Yahoo!?
>>>Yahoo! Tax Center - File online, calculators,
>>
>>forms, and more
>>
>>>http://tax.yahoo.com
>>>_______________________________________________
>>>Insight-users mailing list
>>>Insight-users@public.kitware.com
>>>
>>
> http://public.kitware.com/mailman/listinfo/insight-users
>
>>
>>
>>_______________________________________________
>>Insight-users mailing list
>>Insight-users@public.kitware.com
>>
>
> http://public.kitware.com/mailman/listinfo/insight-users
>
>
> __________________________________________________
> Do you Yahoo!?
> Yahoo! Tax Center - File online, calculators, forms, and more
> http://tax.yahoo.com
> _______________________________________________
> Insight-users mailing list
> Insight-users@public.kitware.com
> http://public.kitware.com/mailman/listinfo/insight-users
>
--
Mathieu Malaterre
CREATIS
28 Avenue du Doyen LEPINE
B.P. Lyon-Montchat
69394 Lyon Cedex 03
http://www.creatis.insa-lyon.fr/~malaterre/