[Insight-users] Can't read Philips dicom data

Sun Oct 12 13:32:58 EDT 2008

Apparently Aaron was able to solve his issue, as reported:

http://www.itk.org/pipermail/insight-users/2008-September/027309.html

Did you read the suggestions I gave in:

http://www.itk.org/pipermail/insight-users/2008-September/027295.html

My guess is that you are trying to load a 4D image, simply load a
single 3D image.

2cts
-Mathieu

On Sun, Oct 12, 2008 at 6:38 PM, zephyrusara <zephyrusara at gmail.com> wrote:
>
> I am newly using ITK to do image processing.
>
> I have met the same problem as Cois posted...but I am still not clear about
> how to solve it by using just a GDCMImageIO and an ImageFileReader ...
>
> I just implement the examples in ITK-DicomSeriesReadImageWrite2.cxx, but
> could not combine my dicom series into a volume.
>
> Could anyone help me ...
>
> Sara
>
>
> C. A. Cois wrote:
>>
>> I've been working with some Philips dicom data, and having
>> some difficulties.  I had been corresponding with the list a few years
>> back
>> about similar problems, and thought you guys may be able to help.  The
>> basic situation is this:
>>
>> I have a data disc with a dicom directory containing IM_###, PS_###,
>> and XX_### files, where ### are integers. The pack-in philips reader
>> can read and display the series, but ITK readers are unable to.  Below
>> is the output from DicomSeriesReadImageWrite2.  In essence, it can
>> read the series headers, but associates only one file with each
>> series, and therefore fails.  I have verified this situation by
>> removing files from the directory while using the pack-in philips
>> reader to read all available series.  I can read a given 3D data set
>> with only two files, one IM_### file and one PS_### file. However, ITK
>> readers can not work with just these two files. I've heard rumblings
>> about a new philips one file dicom format..could this be it?  Anyone
>> have any ideas?
>>
>>
>> OUTPUT
>> -------------
>>
>> The directory:
>>
>> C:\Consulting
>>
>> Contains the following DICOM Series:
>>
>>
>>
>> Now reading series:
>>
>> Data
>>
>>
>>
>> itk::ExceptionObject (00F7FC1C)
>> Location: "void __thiscall itk::ImageSeriesReader<class
>> itk::Image<short,3> >::GenerateOutputInformation(void)"
>> File: c:\source\insighttoolkit-3.2.0\code\io\itkImageSeriesReader.txx
>> Line: 196
>> Description: itk::ERROR: ImageSeriesReader(01411930): At least two
>> filenames are required.
>>
>>
>>
>> The directory:
>>
>> C:\Consulting Projects\Dicom Data 8_19_08\Full Disc
>> Sheep_747_565_732\DICOM
>>
>> Contains the following DICOM Series:
>>
>> 1.3.46.670589.11.20071.5.0.4884.200804261029241460310125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261036501870130112812820080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261046477571140125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261054322032050132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261056536035960125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261058566242870125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261059510149780112812820080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261101109650690125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611022343575100132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611031910614110132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611085634745120125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611093939785130125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611105676883140112812820080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611135920892150125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611222251961160125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611225887022170125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042611332196106180138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612345217277190125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612405740357200138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612423667526210138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612442684695220138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612451848864230138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612480289053240138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042612513628222250138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261358146439110125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261401569548130112812820080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261421272349040125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261422157553350125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261423497862860132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261424427066770132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261429121776680132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261431596895690132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614370304385100112812820080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614425203394110132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614440656433120125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614471210482130125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614480125551140125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614484275620150132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614514951049160132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614530915089170125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614534915138180132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614543931177190125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614570642199200125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614585270288210125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042614593742306220125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615002606426230132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615033739855240125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615040885889250132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615053854943260125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615093315992270125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615102643081280132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615132342502290125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615141101550300132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615255910610320138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615275979779330138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042615312190948340138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261723411211710125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261731278920830138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261754099837940138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261817189254950125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261820324363970125625620080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261823272688880138438420080426
>> 1.3.46.670589.11.20071.5.0.4884.200804261836442388990112812820080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042618443378066100132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042618453975105110132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042618483385235120132032020080426
>> 1.3.46.670589.11.20071.5.0.4884.2008042618505970345140132032020080426
>>
>>
>> Now reading series:
>>
>> 1.3.46.670589.11.20071.5.0.4884.200804261029241460310125625620080426
>>
>>
>>
>> itk::ExceptionObject (00F7FC1C)
>> Location: "void __thiscall itk::ImageSeriesReader<class
>> itk::Image<short,3> >::GenerateOutputInformation(void)"
>> File: c:\source\insighttoolkit-3.2.0\code\io\itkImageSeriesReader.txx
>> Line: 196
>> Description: itk::ERROR: ImageSeriesReader(01411928): At least two
>> filenames are required.
>>
>> --
>> Constantine Aaron Cois, Ph.D.
>>
>> Senior Software Engineer | UPMC ISD Commercial Product Development
>>
>> øffice α 412.915.0077 | çell α 412.915.0077
>> _______________________________________________
>> Insight-users mailing list
>> Insight-users at itk.org
>> http://www.itk.org/mailman/listinfo/insight-users
>>
>>
>
> --
> View this message in context: http://www.nabble.com/Can%27t-read-Philips-dicom-data-tp19522404p19926236.html
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>
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>

-- 
Mathieu