[Insight-users] Lesion Sizing Toolkit.

Luis Ibanez luis.ibanez at kitware.com
Tue Mar 24 11:15:16 EDT 2009


Hi Alex,

Most of the Toolkit code is actually in the Sandbox directory.

A manifestation of the Agile Programming methodology that we
applied for the development of the toolkit.  :-)


The way you shoud configure the build is to point CMake to the
Sandbox subdirectory as the "Source Directory".


Please let us know if you still find any problems.


     Thanks


        Luis


---------------------------
Oleksandr Dzyubak wrote:
> Hi Karthik,
> 
> Thanks for such a nice tool.
> 
> Thanks for pointing out that it only works with ITK 3.12
> which "enforced" me to upgrade my systems.
> After I rebuilt and install the ITK-3.12 release, the toolkit (testing 
> version from Sandbox)
> could be compiled without any problem. However I still have couple 
> questions.
> 
> Following your instructions I did a svn check out but I found that
> the stable directory (Toolkit) is empty, Documents (Papers and 
> UserGuide) are empty,
> Examples are empty etc...
> Reports cannot be compiled since fatal error occurs:
> "!pdfTeX error: /usr/bin/pdflatex (file GMSFG_TestSL0074.png): cannot 
> find image file".
> Is there any place I can just download those files instead of trying to 
> compile them?
> 
> Is it meant to be this way since it is in the developing stage or I am 
> doing
> something terribly wrong?
> 
> To proceed further with tests,  where can I download the test images from?
> 
> Thanks,
> 
> Alex
> 
> 
> Karthik Krishnan wrote:
> 
>> The toolkit will not work with ITK 3.4. Please use the latest release 
>> (ITK 3.12).
>>
>> Thanks
>> -- 
>> karthik
>>
>> On Fri, Mar 13, 2009 at 6:39 PM, Dongqing Chen 
>> <dqchen at cvip.louisville.edu <mailto:dqchen at cvip.louisville.edu>> wrote:
>>
>>     Hello, Karthik:
>>            Sorry for bothering u again. Finally I successfully 
>> download the
>>     Lesion Sizing Toolkit through TortoiseSVN. Now, after I configure
>>     the Toolkit subdirectory by setting both source and binaries in
>>     CMake 2.6 to E:\dqchen\courses\2009spring\LesionSizingKit\Toolkit,
>>     where my Lesion Sizing Toolkit is saved. The Cmake configuration
>>     parameters are attached.
>>            The problem is that I could not build the LesionSizingToolkit
>>     (dsw, I am using vc++ under windows xp 32 bits). The error is:
>>          
>> E:\dqchen\courses\2009spring\LesionSizingKit\Toolkit\Testing\itkSystemInformation.cxx(23) 
>>
>>     : fatal error C1083: Cannot open include file:
>>     'itksys/SystemInformation.hxx': No such file or directory          
>> Could you help on this issue? I guess that it may be caused when I
>>     did my Cmake configuration.
>>           Thanks a lot. Have a nice day and nice weekend.
>>          Best Wishes,
>>     
>> ----------------------------------------------------------------------------- 
>>
>>     Dongqing Chen, Ph.D.
>>     Computer Vision & Image Processing (CVIP) Lab
>>     Department of Electrical & Computer Engineering
>>     Speed School of Engineering
>>     University of Louisville
>>     Louisville, KY, 40292
>>     U.S.A
>>     email: dqchen at cvip.louisville.edu <mailto:dqchen at cvip.louisville.edu>
>>     phone: 1-502-852-2789 (Lab)
>>                  1-502-852-6130 (Office)
>>     
>> ---------------------------------------------------------------------------- 
>>
>>
>>         ----- Original Message -----
>>         *From:* Karthik Krishnan <mailto:karthik.krishnan at kitware.com>
>>         *To:* Dongqing Chen <mailto:dqchen at cairo.spd.louisville.edu>
>>         *Sent:* Friday, March 13, 2009 6:48 AM
>>         *Subject:* Re: Lesion Sizing Toolkit.
>>
>>         If you use Windows, SVN should be availble through the cygwin
>>         port, or through TortoiseSVN.
>>
>>         On Linux, subversion (svn) should come by default. If not,
>>         install it with the package manager. For instance on debian
>>         linux :
>>
>>           sudo apt-get install subversion
>>
>>         Regards
>>         --
>>         karthik
>>
>>
>> ------------------------------------------------------------------------
>>
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> 
> 
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