[Insight-users] [ITK Community] can't build bridge

[WANG Chengjia]

Hi Matt,

Thank you very much!

And how can I fix the error "vxl version too old"?

I finally make/installed itk/vtk/opencv/vxl1.17 but I still can't make the
InsightApplications. And I'm now using itk4.5

Thank you very much!

Best,


On Wed, Feb 5, 2014 at 5:30 AM, Matt McCormick
<matt.mccormick at kitware.com>wrote:

> Hi Chengija,
>
> Welcome to ITK!
>
> There are many opportunities to improve the ITK python wrapping,
> including a number of warnings.
>
> Make sure to use the latest version of ITK for the best DCMTK support.
>  Try turning OFF USE_SYSTEM_DCMTK if trouble persists.
>
> Wrapping is not yet available for the OpenCV bridge yet.  It could be
> added [1] (see the "wrapping" directory of other modules).  The
> quickest route, though, is to use SimpleITK (easy_install SimpleITK),
> then use SimpleITK.GetArrayFromImage() to get the NumPy array, then
> import the NumPy array into OpenCV.
>
> Thanks,
> Matt
>
> [1]
> http://insightsoftwareconsortium.github.io/ITKBarCamp-doc/CommunitySoftwareProcess/SubmitAPatchToGerrit/index.html
>
> On Tue, Feb 4, 2014 at 10:48 PM, WANG Chengjia
> <wangchengjia1986 at gmail.com> wrote:
> > Hi,
> >
> > I must started using itk. So apologize if I asked stupid questions.
> >
> > I want to build ITK with itkOpenCVBridge enabled because I have an urgent
> > project which requires cascade training, neural network and 3D image
> > transformations/feature detections. And I want it work with python wrap
> as I
> > want to create 3DSlicer scripts (while 3DSlicer is lack of documents and
> > adequate debugging tools).
> >
> > but I kept receiving error/warnings during the configure/generate/make
> > process. Any modules related swig, itkvtkglue, dcmtk, vxl can't be built
> > (but I have already installed the newest version of these pacs/libs in
> > ubuntu, the cmake just say that vxl version is too old, can't find
> > DCMTK_LIBRARIES no matter how I set the paths). So I just disabled these
> > items in cmake.
> >
> > Then I received some errors/warnings in make process, such as the
> following
> > one:
> >
> >
> home/ivjia/itk/InsightToolkit-4.4.2/bin/Wrapping/Modules/ITKStatistics/itkHistogramToIntensityImageFilterPython.cpp:
> > In function 'void SWIG_InitializeModule(void*)':
> >
> /home/ivjia/itk/InsightToolkit-4.4.2/bin/Wrapping/Modules/ITKStatistics/itkHistogramToIntensityImageFilterPython.cpp:13566:21:
> > warning: statement has no effect [-Wunused-value]
> > [ 72%] Building CXX object
> >
> Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest1.cxx.o
> > [ 72%] Generating itkCenteredSimilarity2DTransformPython.cpp,
> > ../../../lib/itkCenteredSimilarity2DTransformPython.py
> >
> > How can I bulid itk with all these properties enabled?
> >
> > Thank you very much!
> >
> > Best,
> >
> > --
> > Chengjia Wang
> > Phd Student,
> > University of Edinburgh
> > Clinical Research Imaging Center (CRIC)
> > Toshiba Medical Visualization Systems Europe, Ltd
> > Email: wangchengjia1986 at gmail.com
> >
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>



-- 
Chengjia Wang
Phd Student,
University of Edinburgh
Clinical Research Imaging Center (CRIC)
Toshiba Medical Visualization Systems Europe, Ltd
Email: wangchengjia1986 at gmail.com
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