[ITK-users] Building testing application for N3 implementation

Bill Lorensen bill.lorensen at gmail.com
Sat May 2 11:02:23 EDT 2015


This is an older implementation. ITK currently has
N4BiasFieldCorrectionImageFilter. I would try this instead. It is in
Modules/Filtering/BiasCorrection/include/itkN4BiasFieldCorrectionImageFilte

Bill

On Sat, May 2, 2015 at 10:12 AM, Jan Dorazil <deu439 at gmail.com> wrote:
> Hello,
> I am currently working on some MRI images and, would like to
> test the ITK implementation of the N3 algorithm for MRI Bias
> Field correction.
> I have downloaded the source code for a
> testing application (http://www.insight-journal.org/browse/publication/640)
> but cant manage to compile it.
> As I try to configure the package using cmake I get this error:
> --
> CMake Error at CMakeLists.txt:20 (INCLUDE):
>   include could not find load file:
>
>     /usr/share/cmake-3.2/Modules/FindITK.cmake
> --
> I looked inside the supplied CMakeLists.txt and found out it is this
> portion thats causing the error.
> --
> INCLUDE (${CMAKE_ROOT}/Modules/FindITK.cmake)
> IF (USE_ITK_FILE)
>   INCLUDE(${USE_ITK_FILE})
> ENDIF(USE_ITK_FILE)
> --
> What's the problem here? Shouldnt ITK installation
> install the FindITK.cmake? I have not found it anywhere  on
> my disc. Anyway, why dont other packages require this
> file - I have already built a lot of ITK applications.
>
> ITK version: 4.7.1-1
> cmake version 3.2.2
> #uname -a
> Linux Clifford 3.19.3-3-ARCH #1 SMP PREEMPT Wed Apr 8 14:10:00 CEST 2015
> x86_64 GNU/Linux
>
> Regards,
> Jan Dorazil
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