[ITK-users] ITK MESH

Matt McCormick matt.mccormick at kitware.com
Tue Jun 20 13:12:19 EDT 2017


Hi,

Points in the itk::Mesh are in physical coordinates. So, it is important
that the metadata such as the Image Spacing and Origin are preserved, etc.
For more information see the Mesh section of the ITK Software Guide [1] and
the Image section [2].

Hope this helps,
Matt

[1]
https://itk.org/ITKSoftwareGuide/html/Book1/ITKSoftwareGuide-Book1ch4.html#x38-620004.3

[2]
https://itk.org/ITKSoftwareGuide/html/Book1/ITKSoftwareGuide-Book1ch4.html#x38-470004.1

On Tue, Jun 20, 2017 at 12:53 PM, MAB12 <marc.boucher88 at gmail.com> wrote:

> Hi
>
> I have a binary mask, (segmentation result) and I convert it to a an
> itk::Mesh using BinaryMask3DMeshSource. I write the result into a byu Mesh
> after. The outcome is a byu Mesh file but that lost all spatial
> configuration and is far away in the spatial coordinate from my ground
> truth
> segmentation. The binary mask before was fine I used it to convert it
> manually with itk-SNAP.
>
> Any idea was is the problem or insight into how itk Mesh works?
>
>
>
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