ITK  5.4.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Attributes | List of all members
itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction > Class Template Reference

#include <itkCurvatureRegistrationFilter.h>

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField, typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
class itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >

Deformably register two images using the fast curvature algorithm.

CurvatureRegistrationFilter implements the fast (i.e., O(n log n) ) registration method described in B. Fischer and J. Modersitzki, "A unified approach to fast image registration and a new curvature based registration technique," Linear Algebra and its Applications, vol. 380, pp. 107-124, 2004.

A deformation field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type, the deformation field type, and the images forces function. Fundamentally, any image force function in the PDE framework should work (e.g., mean squares, demons, correlation, mutual information, etc.).

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial deformation field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The output deformation field can be obtained via methods GetOutput or GetDisplacementField.

This class makes use of the finite difference solver hierarchy. Update for each iteration is computed in the function class defined by the template parameter TImageForceFunction.

The algorithm has three parameters: the number of iteration to be performed, the time step, and the weight of the curvature regularization term in the overall cost function.

Warning
The algorithm parameters (time step and constraint weight) as given by F&M (dt=100; alpha=0.01) do not seem to work with this implementation. In fact, they seem to be off by orders of magnitude. This may be an effect of different normalization of the image forces, or this implementation may be incorrect. Be aware.
This filter assumes that the fixed image type, moving image type and deformation field type all have the same number of dimensions.
There is something sketchy going on with the DCT (see FFTW documentation) regarding numerical stability of the "ordinary" DCT. Also, F&M are slightly ambiguous in their use of the DCT operator. So it is quite possible that the implementation of their algorithm is not quite correct. Ultimately, they are saying that the curvature smoother is equivalent to a special low-pass filter that is applied to the DCT coefficients.
Note
This class was developed with funding from:

"CNS Deficits: Interaction of Age and Alcoholism" NIAAA AA05965, PI: A. Pfefferbaum

"INIA: Imaging Core" NIAAA AA13521, PI: A. Pfefferbaum

See also
CurvatureRegistrationFunction
Author
Torsten Rohlfing, SRI International, Neuroscience Program
Examples
Examples/RegistrationITKv4/DeformableRegistration10.cxx, and Examples/RegistrationITKv4/DeformableRegistration9.cxx.

Definition at line 101 of file itkCurvatureRegistrationFilter.h.

+ Inheritance diagram for itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >:
+ Collaboration diagram for itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using DisplacementFieldComponentImagePointer = typename DisplacementFieldComponentImageType::Pointer
 
using DisplacementFieldComponentImageType = Image< RealTypeDFT, TDisplacementField::ImageDimension >
 
using DisplacementFieldComponentType = typename DisplacementFieldPixelType::ValueType
 
using DisplacementFieldPixelType = typename TDisplacementField::PixelType
 
using Pointer = SmartPointer< Self >
 
using RealTypeDFT = double
 
using RegistrationFunctionType = TImageForceFunction
 
using Self = CurvatureRegistrationFilter
 
using Superclass = PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
 
- Public Types inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using DisplacementFieldPointer = typename DisplacementFieldType::Pointer
 
using DisplacementFieldType = TDisplacementField
 
using FixedImageConstPointer = typename FixedImageType::ConstPointer
 
using FixedImagePointer = typename FixedImageType::Pointer
 
using FixedImageType = TFixedImage
 
using MovingImageConstPointer = typename MovingImageType::ConstPointer
 
using MovingImagePointer = typename MovingImageType::Pointer
 
using MovingImageType = TMovingImage
 
using PDEDeformableRegistrationFunctionType = PDEDeformableRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType >
 
using Pointer = SmartPointer< Self >
 
using Self = PDEDeformableRegistrationFilter
 
using StandardDeviationsType = FixedArray< double, ImageDimension >
 
using Superclass = DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 
- Public Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = DenseFiniteDifferenceImageFilter
 
using Superclass = FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 
using UpdateBufferType = OutputImageType
 
- Public Types inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using FiniteDifferenceFunctionType = FiniteDifferenceFunction< TDisplacementField >
 
using InputImageType = TDisplacementField
 
using InputPixelType = typename TDisplacementField ::PixelType
 
using InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType
 
using NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType
 
using OutputImageType = TDisplacementField
 
using OutputPixelType = typename TDisplacementField ::PixelType
 
using OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType
 
using PixelType = OutputPixelType
 
using Pointer = SmartPointer< Self >
 
using RadiusType = typename FiniteDifferenceFunctionType::RadiusType
 
using Self = FiniteDifferenceImageFilter
 
using Superclass = InPlaceImageFilter< TDisplacementField, TDisplacementField >
 
using TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType
 
- Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TDisplacementField
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TDisplacementField, TDisplacementField >
 
- Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TDisplacementField
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TDisplacementField >
 
- Public Types inherited from itk::ImageSource< TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TDisplacementField
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual double GetMetric () const
 
const char * GetNameOfClass () const override
 
void SetConstraintWeight (const float w)
 
void SetTimeStep (const TimeStepType ts)
 
- Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
DisplacementFieldTypeGetDisplacementField ()
 
virtual const FixedImageTypeGetFixedImage () const
 
virtual const DisplacementFieldTypeGetInitialDisplacementField () const
 
virtual const MovingImageTypeGetMovingImage () const
 
const char * GetNameOfClass () const override
 
std::vector< SmartPointer< DataObject > >::size_type GetNumberOfValidRequiredInputs () const override
 
virtual const StandardDeviationsTypeGetStandardDeviations () const
 
virtual const StandardDeviationsTypeGetUpdateFieldStandardDeviations () const
 
virtual void SetFixedImage (const FixedImageType *input)
 
virtual void SetInitialDisplacementField (const DisplacementFieldType *input)
 
virtual void SetMovingImage (const MovingImageType *input)
 
virtual void StopRegistration ()
 
virtual void SetSmoothDisplacementField (bool _arg)
 
virtual bool GetSmoothDisplacementField () const
 
virtual void SmoothDisplacementFieldOn ()
 
virtual void SetStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetStandardDeviations (double value)
 
virtual void SetSmoothUpdateField (bool _arg)
 
virtual bool GetSmoothUpdateField () const
 
virtual void SmoothUpdateFieldOn ()
 
virtual void SetUpdateFieldStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetUpdateFieldStandardDeviations (double value)
 
virtual void SetMaximumError (double _arg)
 
virtual double GetMaximumError () const
 
virtual void SetMaximumKernelWidth (unsigned int _arg)
 
virtual unsigned int GetMaximumKernelWidth () const
 
- Public Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
const char * GetNameOfClass () const override
 
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual const FiniteDifferenceFunctionType ::PointerGetDifferenceFunction () const
 
virtual const IdentifierTypeGetElapsedIterations () const
 
virtual bool GetIsInitialized ()
 
const char * GetNameOfClass () const override
 
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
 
virtual void SetIsInitialized (bool _arg)
 
void SetStateToInitialized ()
 
void SetStateToUninitialized ()
 
virtual void SetNumberOfIterations (IdentifierType _arg)
 
virtual const IdentifierTypeGetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual bool CanRunInPlace () const
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *input)
 
virtual void PushFrontInput (const InputImageType *input)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *input)
 
virtual void SetInput (unsigned int, const TDisplacementField *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageTypeGetOutput (unsigned int idx)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *graft)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *graft)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual float GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
void IncrementProgress (float increment)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool val)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
LightObject::Pointer CreateAnother () const override
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static double GetGlobalDefaultCoordinateTolerance ()
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static void SetGlobalDefaultDirectionTolerance (double)
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int DeformationVectorDimension = DisplacementFieldPixelType::Dimension
 
static constexpr unsigned int ImageDimension = FixedImageType::ImageDimension
 
- Static Public Attributes inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static constexpr unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static constexpr unsigned int OutputImageDimension
 

Protected Member Functions

void ApplyUpdate (const TimeStepType &dt) override
 
 CurvatureRegistrationFilter ()
 
void Initialize () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 ~CurvatureRegistrationFilter () override
 
- Protected Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
void CopyInputToOutput () override
 
void GenerateInputRequestedRegion () override
 
void GenerateOutputInformation () override
 
bool Halt () override
 
void Initialize () override
 
void InitializeIteration () override
 
 PDEDeformableRegistrationFilter ()
 
void PostProcessOutput () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void SmoothDisplacementField ()
 
virtual void SmoothUpdateField ()
 
 ~PDEDeformableRegistrationFilter () override=default
 
- Protected Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
void AllocateUpdateBuffer () override
 
void ApplyUpdate (const TimeStepType &dt) override
 
TimeStepType CalculateChange () override
 
void CopyInputToOutput () override
 
 DenseFiniteDifferenceImageFilter ()
 
virtual UpdateBufferTypeGetUpdateBuffer ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
virtual TimeStepType ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
 ~DenseFiniteDifferenceImageFilter () override=default
 
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 FiniteDifferenceImageFilter ()
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const BooleanStdVectorType &valid) const
 
virtual void SetElapsedIterations (IdentifierType _arg)
 
virtual bool ThreadedHalt (void *)
 
 ~FiniteDifferenceImageFilter () override=default
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()=default
 
void ReleaseInputs () override
 
 ~InPlaceImageFilter () override=default
 
void AllocateOutputs () override
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
void VerifyInputInformation () ITKv5_CONST override
 
 ~ImageToImageFilter () override=default
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PushFrontInput (const DataObject *input)
 
- Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PushFrontInput (const DataObject *input)
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &name, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *object)
 
virtual void SetPrimaryOutput (DataObject *object)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType i)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType i) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual bool GetThreaderUpdateProgress () const
 
virtual void ThreaderUpdateProgressOn ()
 
virtual void SetThreaderUpdateProgress (bool arg)
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Attributes

float m_ConstraintWeight {}
 
RealTypeDFTm_DiagonalElements [ImageDimension] {}
 
RealTypeDFTm_DisplacementFieldComponentImage {}
 
RealTypeDFTm_DisplacementFieldComponentImageDCT {}
 
unsigned int m_FixedImageDimensions [ImageDimension] {}
 
fftw_plan m_PlanBackwardDCT {}
 
fftw_plan m_PlanForwardDCT {}
 
TimeStepType m_TimeStep {}
 

Additional Inherited Members

- Protected Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using ThreadRegionType = typename UpdateBufferType::RegionType
 
- Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float progressFixedToFloat (uint32_t fixed)
 
static uint32_t progressFloatToFixed (float f)
 
- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
IdentifierType m_ElapsedIterations
 
bool m_IsInitialized
 
bool m_ManualReinitialization
 
double m_MaximumRMSError
 
IdentifierType m_NumberOfIterations
 
double m_RMSChange
 
- Protected Attributes inherited from itk::ImageSource< TDisplacementField >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime {}
 
bool m_Updating {}
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount {}
 

Member Typedef Documentation

◆ ConstPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::ConstPointer = SmartPointer<const Self>

Definition at line 111 of file itkCurvatureRegistrationFilter.h.

◆ DisplacementFieldComponentImagePointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::DisplacementFieldComponentImagePointer = typename DisplacementFieldComponentImageType::Pointer

Definition at line 151 of file itkCurvatureRegistrationFilter.h.

◆ DisplacementFieldComponentImageType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::DisplacementFieldComponentImageType = Image<RealTypeDFT, TDisplacementField::ImageDimension>

Definition at line 150 of file itkCurvatureRegistrationFilter.h.

◆ DisplacementFieldComponentType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::DisplacementFieldComponentType = typename DisplacementFieldPixelType::ValueType

Definition at line 136 of file itkCurvatureRegistrationFilter.h.

◆ DisplacementFieldPixelType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::DisplacementFieldPixelType = typename TDisplacementField::PixelType

Definition at line 135 of file itkCurvatureRegistrationFilter.h.

◆ Pointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::Pointer = SmartPointer<Self>

Definition at line 110 of file itkCurvatureRegistrationFilter.h.

◆ RealTypeDFT

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::RealTypeDFT = double

Definition at line 141 of file itkCurvatureRegistrationFilter.h.

◆ RegistrationFunctionType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::RegistrationFunctionType = TImageForceFunction

CurvatureRegistrationFilterFunction type.

Definition at line 157 of file itkCurvatureRegistrationFilter.h.

◆ Self

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::Self = CurvatureRegistrationFilter

Standard class type aliases.

Definition at line 108 of file itkCurvatureRegistrationFilter.h.

◆ Superclass

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
using itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::Superclass = PDEDeformableRegistrationFilter<TFixedImage, TMovingImage, TDisplacementField>

Definition at line 109 of file itkCurvatureRegistrationFilter.h.

Constructor & Destructor Documentation

◆ CurvatureRegistrationFilter()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::CurvatureRegistrationFilter ( )
protected

◆ ~CurvatureRegistrationFilter()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::~CurvatureRegistrationFilter ( )
overrideprotected

Member Function Documentation

◆ ApplyUpdate()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
void itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::ApplyUpdate ( const TimeStepType dt)
overrideprotectedvirtual

◆ GetMetric()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
virtual double itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::GetMetric ( ) const
virtual

Get the metric value. The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the overlapping region between the two images. This is value is only available for the previous iteration and NOT the current iteration.

◆ GetNameOfClass()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
const char* itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::GetNameOfClass ( ) const
overridevirtual

◆ Initialize()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
void itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::Initialize ( )
overrideprotectedvirtual

Initialize the state of filter before starting first iteration.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

◆ New()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
static Pointer itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::New ( )
static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
void itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

◆ SetConstraintWeight()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
void itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::SetConstraintWeight ( const float  w)
inline

Set the constraint vs. image forces weight.

Definition at line 161 of file itkCurvatureRegistrationFilter.h.

◆ SetTimeStep()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
void itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::SetTimeStep ( const TimeStepType  ts)
inline

Set the time step.

Definition at line 168 of file itkCurvatureRegistrationFilter.h.

Member Data Documentation

◆ DeformationVectorDimension

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
constexpr unsigned int itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::DeformationVectorDimension = DisplacementFieldPixelType::Dimension
staticconstexpr

Definition at line 137 of file itkCurvatureRegistrationFilter.h.

◆ ImageDimension

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
constexpr unsigned int itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::ImageDimension = FixedImageType::ImageDimension
staticconstexpr

Definition at line 125 of file itkCurvatureRegistrationFilter.h.

◆ m_ConstraintWeight

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
float itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_ConstraintWeight {}
private

Definition at line 201 of file itkCurvatureRegistrationFilter.h.

◆ m_DiagonalElements

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
RealTypeDFT* itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_DiagonalElements[ImageDimension] {}
private

Definition at line 208 of file itkCurvatureRegistrationFilter.h.

◆ m_DisplacementFieldComponentImage

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
RealTypeDFT* itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_DisplacementFieldComponentImage {}
private

Definition at line 198 of file itkCurvatureRegistrationFilter.h.

◆ m_DisplacementFieldComponentImageDCT

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
RealTypeDFT* itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_DisplacementFieldComponentImageDCT {}
private

Definition at line 199 of file itkCurvatureRegistrationFilter.h.

◆ m_FixedImageDimensions

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
unsigned int itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_FixedImageDimensions[ImageDimension] {}
private

Definition at line 196 of file itkCurvatureRegistrationFilter.h.

◆ m_PlanBackwardDCT

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
fftw_plan itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_PlanBackwardDCT {}
private

Definition at line 204 of file itkCurvatureRegistrationFilter.h.

◆ m_PlanForwardDCT

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
fftw_plan itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_PlanForwardDCT {}
private

Definition at line 203 of file itkCurvatureRegistrationFilter.h.

◆ m_TimeStep

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField , typename TImageForceFunction = MeanSquareRegistrationFunction<TFixedImage, TMovingImage, TDisplacementField>>
TimeStepType itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >::m_TimeStep {}
private

Definition at line 206 of file itkCurvatureRegistrationFilter.h.


The documentation for this class was generated from the following file: